MGE detailed information
MGE type: Genomic_island MGE length: 10413 bp
Accession: NZ_CP075109 Location: 960644..971056 Organism: Salmonella enterica strain CFSAN060807 Replicon: chromosome
Accession: NZ_CP075109 Location: 960644..971056 Organism: Salmonella enterica strain CFSAN060807 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC24_RS04560 (957068) | 957068..957465 | + | 398 | Protein_893 | cytoplasmic protein | - |
| CIC24_RS04565 (957656) | 957656..957844 | + | 189 | Protein_894 | hypothetical protein | - |
| CIC24_RS04570 (958052) | 958052..958720 | + | 669 | WP_000445914.1 | hypothetical protein | - |
| CIC24_RS04575 (958747) | 958747..959241 | + | 495 | WP_000424948.1 | hypothetical protein | - |
| CIC24_RS04580 (959486) | 959486..960142 | - | 657 | WP_000420452.1 | protein-serine/threonine phosphatase | - |
| CIC24_RS04585 (960375) | 960375..960784 | + | 410 | Protein_898 | IS5/IS1182 family transposase | - |
| CIC24_RS04590 (960857) | 960857..961384 | - | 528 | WP_000971658.1 | GNAT family N-acetyltransferase | Toxin Detail |
| CIC24_RS04595 (961381) | 961381..961671 | - | 291 | WP_000855694.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| CIC24_RS04600 (961941) | 961941..962141 | - | 201 | Protein_901 | IS3 family transposase | - |
| CIC24_RS04605 (962382) | 962382..962708 | + | 327 | WP_000393305.1 | hypothetical protein | - |
| CIC24_RS04610 (962981) | 962981..963328 | - | 348 | WP_001669174.1 | DUF1493 family protein | - |
| CIC24_RS04615 (963313) | 963313..963762 | - | 450 | WP_000381612.1 | membrane protein | - |
| CIC24_RS04620 (964194) | 964194..964637 | - | 444 | WP_079798511.1 | hypothetical protein | VF |
| CIC24_RS04625 (965093) | 965093..965743 | + | 651 | WP_001674874.1 | Cyclic di-GMP phosphodiesterase PdeF | VF |
| CIC24_RS04630 (965740) | 965740..967428 | + | 1689 | WP_000848102.1 | Branched-chain amino acid transport system 2 carrier protein | VF |
| CIC24_RS04635 (967425) | 967425..968543 | + | 1119 | WP_000612171.1 | Proline-specific permease ProY | VF |
| CIC24_RS04640 (968568) | 968568..970625 | + | 2058 | WP_000927220.1 | hypothetical protein | VF |
| CIC24_RS04645 (970649) | 970649..971056 | + | 408 | WP_001164066.1 | Miniconductance mechanosensitive channel YbdG | VF |
| CIC24_RS04650 (971053) | 971053..972348 | + | 1296 | WP_000856766.1 | SctN family type III secretion system ATPase InvC | - |
| CIC24_RS04655 (972326) | 972326..972769 | + | 444 | WP_000555884.1 | SPI-1 type III secretion system protein SpaM | - |
| CIC24_RS04660 (972769) | 972769..973779 | + | 1011 | WP_000503111.1 | SPI-1 type III secretion system protein SpaN | - |
| CIC24_RS04665 (973779) | 973779..974690 | + | 912 | WP_000058741.1 | SPI-1 type III secretion system protein SpaO | - |
| CIC24_RS04670 (974680) | 974680..975354 | + | 675 | WP_000526014.1 | SPI-1 type III secretion system export apparatus protein SpaP | - |
| CIC24_RS04675 (975380) | 975380..975640 | + | 261 | WP_000342503.1 | SPI-1 type III secretion system export apparatus protein SpaQ | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Salmonella enterica subsp. enterica serovar Typhimurium strain NCTC12023 | Genomic island | TA10052 | UFRD01000002 | 4599654..4610080 | 0.01 |