MGE detailed information
MGE type: Prophage MGE length: 61361 bp
Accession: NZ_CP075109 Location: 1973204..2034564 Organism: Salmonella enterica strain CFSAN060807 Replicon: chromosome
Accession: NZ_CP075109 Location: 1973204..2034564 Organism: Salmonella enterica strain CFSAN060807 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC24_RS09425 () | 1968941..1969393 | + | 453 | WP_000653694.1 | dihydroneopterin triphosphate diphosphatase | - |
| CIC24_RS09430 () | 1969423..1970163 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CIC24_RS09435 () | 1970200..1970721 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CIC24_RS09440 () | 1970723..1971322 | - | 600 | WP_000716742.1 | YebB family permuted papain-like enzyme | - |
| CIC24_RS09445 () | 1971565..1972223 | + | 659 | Protein_1848 | hypothetical protein | - |
| CIC24_RS09450 () | 1972584..1973195 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| CIC24_RS09455 () | 1973204..1974214 | + | 1011 | WP_000568508.1 | Holliday junction ATP-dependent DNA helicase RuvB | VF |
| CIC24_RS09460 () | 1974293..1975078 | - | 786 | WP_000571508.1 | hypothetical protein | VF |
| CIC24_RS09465 () | 1975075..1975830 | - | 756 | WP_000203013.1 | Vitamin B12 import ATP-binding protein BtuD | VF |
| CIC24_RS09470 () | 1975909..1976853 | + | 945 | WP_000939597.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CIC24_RS09475 () | 1976869..1978188 | + | 1320 | WP_001184028.1 | murein DD-endopeptidase MepM | - |
| CIC24_RS09480 () | 1978305..1979276 | + | 972 | WP_000448401.1 | Lipid A biosynthesis myristoyltransferase | VF |
| CIC24_RS09485 () | 1979349..1980791 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| CIC24_RS09490 () | 1980915..1981784 | - | 870 | WP_023194353.1 | MurR/RpiR family transcriptional regulator | - |
| CIC24_RS09495 () | 1982126..1983601 | + | 1476 | WP_000301704.1 | glucose-6-phosphate dehydrogenase | - |
| CIC24_RS09500 () | 1983836..1985647 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| CIC24_RS09505 () | 1985685..1986326 | + | 642 | WP_000800495.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CIC24_RS09510 () | 1986426..1987604 | - | 1179 | WP_000173418.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CIC24_RS09515 () | 1987735..1988025 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| CIC24_RS09520 () | 1988093..1988446 | + | 354 | WP_001042123.1 | protein YebF | - |
| CIC24_RS09525 () | 1988540..1989199 | + | 660 | WP_023243913.1 | tellurite resistance TerB family protein | - |
| CIC24_RS09530 () | 1989412..1991463 | + | 2052 | WP_000936990.1 | oligopeptidase B | - |
| CIC24_RS09535 () | 1991498..1992196 | - | 699 | WP_000944279.1 | exodeoxyribonuclease X | - |
| CIC24_RS09540 () | 1992220..1992876 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| CIC24_RS09545 () | 1992984..1993214 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| CIC24_RS09550 () | 1993352..1993726 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| CIC24_RS09555 () | 1993727..1994602 | + | 876 | WP_000979694.1 | copper homeostasis membrane protein CopD | - |
| CIC24_RS09560 () | 1994619..1994972 | + | 354 | WP_000722370.1 | YebY family protein | - |
| - | 1995074..1995217 | - | 144 | - | - | Antitoxin Detail |
| - | 1995112..1995215 | + | 104 | - | - | Toxin Detail |
| CIC24_RS09565 () | 1995345..1996186 | - | 842 | Protein_1872 | tyrosine-type recombinase/integrase | - |
| CIC24_RS09570 () | 1996277..1996633 | + | 357 | WP_000003145.1 | hypothetical protein | - |
| CIC24_RS22990 () | 1996587..1996793 | + | 207 | Protein_1874 | phage tail protein | - |
| CIC24_RS22995 () | 1996965..1997120 | + | 156 | Protein_1875 | DUF4376 domain-containing protein | - |
| CIC24_RS23000 () | 1997226..1997558 | + | 333 | WP_031609875.1 | DUF1353 domain-containing protein | - |
| CIC24_RS09580 () | 1997607..1997716 | + | 110 | Protein_1877 | tail fiber assembly protein | - |
| CIC24_RS09585 () | 1997807..1997992 | - | 186 | WP_012218702.1 | PagK family vesicle-borne virulence factor | - |
| CIC24_RS09590 () | 1998235..1998432 | - | 198 | Protein_1879 | tail fiber assembly protein | - |
| CIC24_RS09595 () | 1998428..1999198 | - | 771 | WP_001652627.1 | transporter substrate-binding domain-containing protein | - |
| CIC24_RS23005 () | 1999274..1999366 | + | 93 | Protein_1881 | DUF4113 domain-containing protein | - |
| CIC24_RS09600 () | 1999689..1999817 | + | 129 | Protein_1882 | helix-turn-helix domain-containing protein | - |
| CIC24_RS09605 () | 1999846..2000646 | - | 801 | WP_001536069.1 | hypothetical protein | - |
| CIC24_RS09610 () | 2001600..2002679 | - | 1080 | WP_076741596.1 | hypothetical protein ; Integrase | Integrase |
| CIC24_RS09620 () | 2002712..2003863 | - | 1152 | Protein_1885 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| CIC24_RS09625 () | 2003852..2004043 | + | 192 | Protein_1886 | glycoside hydrolase family 19 protein | - |
| CIC24_RS09630 () | 2004097..2004630 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| CIC24_RS09635 () | 2004887..2005054 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| CIC24_RS09640 () | 2005362..2005622 | + | 261 | Protein_1889 | DUF1441 family protein | - |
| CIC24_RS23010 () | 2005624..2005839 | + | 216 | Protein_1890 | shikimate transporter | - |
| CIC24_RS09645 () | 2005837..2006181 | + | 345 | Protein_1891 | macro domain-containing protein | - |
| CIC24_RS09650 () | 2006191..2006661 | + | 471 | Protein_1892 | tail fiber assembly protein | - |
| CIC24_RS09655 () | 2006758..2006958 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| CIC24_RS23015 () | 2007348..2007528 | - | 181 | Protein_1894 | IS3 family transposase | - |
| CIC24_RS09660 () | 2007519..2007620 | + | 102 | Protein_1895 | arsenic transporter | - |
| CIC24_RS23020 () | 2008242..2008474 | + | 233 | Protein_1896 | helix-turn-helix domain-containing protein | - |
| CIC24_RS09675 () | 2008801..2009415 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| CIC24_RS09680 () | 2009425..2009583 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| CIC24_RS09685 () | 2009716..2010630 | - | 915 | WP_001233454.1 | DMT family transporter | - |
| CIC24_RS09690 () | 2011925..2012346 | - | 422 | Protein_1900 | tyrosine-type recombinase/integrase | - |
| CIC24_RS09695 () | 2012417..2013611 | + | 1195 | Protein_1901 | IS256 family transposase IS285 | Transposase |
| CIC24_RS09700 () | 2013757..2013897 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| CIC24_RS09705 () | 2014063..2014332 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| CIC24_RS09710 () | 2014702..2015121 | + | 420 | WP_000354407.1 | GNAT family N-acetyltransferase | - |
| CIC24_RS09715 () | 2015494..2015970 | - | 477 | WP_079798327.1 | hypothetical protein | - |
| CIC24_RS09720 () | 2016299..2016694 | - | 396 | WP_000422889.1 | DUF1398 domain-containing protein | - |
| CIC24_RS09725 () | 2017378..2018100 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| CIC24_RS09730 () | 2018385..2018549 | + | 165 | WP_001134857.1 | hypothetical protein | - |
| CIC24_RS09735 () | 2018773..2019423 | + | 651 | WP_000986174.1 | protein-serine/threonine phosphatase | - |
| CIC24_RS09740 () | 2019442..2019633 | - | 192 | WP_000457838.1 | DUF1482 family protein | - |
| CIC24_RS09745 () | 2019744..2019980 | - | 237 | WP_024131167.1 | YebV family protein | - |
| CIC24_RS09750 () | 2020098..2021537 | - | 1440 | WP_024152359.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CIC24_RS09755 () | 2021615..2024248 | - | 2634 | WP_001529852.1 | hypothetical protein | VF |
| CIC24_RS09760 () | 2024217..2025500 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| CIC24_RS09765 () | 2025629..2026126 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| CIC24_RS09770 () | 2026224..2026910 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| CIC24_RS09775 () | 2026930..2028978 | + | 2049 | WP_001091237.1 | carboxy terminal-processing peptidase | - |
| CIC24_RS09780 () | 2029171..2030052 | + | 882 | WP_000984498.1 | protease HtpX | - |
| CIC24_RS09785 () | 2030100..2031473 | - | 1374 | WP_079798328.1 | MFS transporter | - |
| CIC24_RS09790 () | 2031649..2032440 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| CIC24_RS09795 () | 2032652..2032891 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| CIC24_RS09800 () | 2033049..2033192 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| CIC24_RS09805 () | 2033263..2033550 | + | 288 | WP_001000660.1 | YebO family protein | - |
| CIC24_RS09810 () | 2034199..2034342 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| CIC24_RS09815 () | 2034355..2034564 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CIC24_RS09820 () | 2034784..2036529 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| CIC24_RS09825 () | 2036595..2037404 | + | 810 | WP_023193489.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CIC24_RS09830 () | 2037401..2037967 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| CIC24_RS09835 () | 2038377..2038835 | - | 459 | WP_000156280.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|