MGE detailed information
MGE type: Prophage MGE length: 55103 bp
Accession: NZ_CP075108 Location: 1922748..1977850 Organism: Salmonella enterica strain CFSAN060808 Replicon: chromosome
Accession: NZ_CP075108 Location: 1922748..1977850 Organism: Salmonella enterica strain CFSAN060808 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CIC23_RS09140 () | 1918486..1918938 | + | 453 | WP_000653693.1 | dihydroneopterin triphosphate diphosphatase | - |
| CIC23_RS09145 () | 1918968..1919708 | + | 741 | WP_000907242.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| CIC23_RS09150 () | 1919745..1920266 | + | 522 | WP_000022509.1 | crossover junction endodeoxyribonuclease RuvC | - |
| CIC23_RS09155 () | 1920268..1920867 | - | 600 | WP_000716750.1 | YebB family permuted papain-like enzyme | - |
| CIC23_RS09160 () | 1921076..1921768 | + | 693 | WP_000227324.1 | hypothetical protein | - |
| CIC23_RS09165 () | 1922128..1922739 | + | 612 | WP_000580335.1 | Holliday junction branch migration protein RuvA | - |
| CIC23_RS09170 () | 1922748..1923758 | + | 1011 | WP_000568504.1 | Holliday junction branch migration DNA helicase RuvB | - |
| CIC23_RS09175 () | 1923837..1924622 | - | 786 | WP_000571510.1 | hypothetical protein | VF |
| CIC23_RS09180 () | 1924619..1925374 | - | 756 | WP_000203023.1 | hypothetical protein | VF |
| CIC23_RS09185 () | 1925453..1926397 | + | 945 | WP_000939594.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| CIC23_RS09190 () | 1926413..1927732 | + | 1320 | WP_001184032.1 | murein DD-endopeptidase MepM | - |
| CIC23_RS09195 () | 1927849..1928820 | + | 972 | WP_000448401.1 | hypothetical protein | VF |
| CIC23_RS09200 () | 1928893..1930335 | - | 1443 | WP_000091156.1 | pyruvate kinase | - |
| CIC23_RS09205 () | 1930459..1931328 | - | 870 | WP_001056719.1 | MurR/RpiR family transcriptional regulator | - |
| CIC23_RS09210 () | 1931670..1933145 | + | 1476 | WP_000301711.1 | glucose-6-phosphate dehydrogenase | - |
| CIC23_RS09215 () | 1933380..1935191 | + | 1812 | WP_001069113.1 | phosphogluconate dehydratase | - |
| CIC23_RS09220 () | 1935229..1935870 | + | 642 | WP_000800494.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| CIC23_RS09225 () | 1935970..1937148 | - | 1179 | WP_000173429.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| CIC23_RS09230 () | 1937279..1937569 | + | 291 | WP_000257723.1 | DNA damage-inducible protein YebG | - |
| CIC23_RS09235 () | 1937637..1937990 | + | 354 | WP_001042123.1 | protein YebF | - |
| CIC23_RS09240 () | 1938084..1938743 | + | 660 | WP_000024706.1 | tellurite resistance TerB family protein | - |
| CIC23_RS09245 () | 1938957..1941008 | + | 2052 | WP_000936997.1 | oligopeptidase B | - |
| CIC23_RS09250 () | 1941043..1941741 | - | 699 | WP_000944285.1 | exodeoxyribonuclease X | - |
| CIC23_RS09255 () | 1941765..1942421 | - | 657 | WP_000100257.1 | carbon-nitrogen hydrolase family protein | - |
| CIC23_RS09260 () | 1942529..1942759 | - | 231 | WP_000856224.1 | DNA polymerase III subunit theta | - |
| CIC23_RS09265 () | 1942897..1943271 | + | 375 | WP_000168393.1 | CopC domain-containing protein YobA | - |
| CIC23_RS09270 () | 1943272..1944147 | + | 876 | WP_072103328.1 | copper homeostasis membrane protein CopD | - |
| CIC23_RS09275 () | 1944164..1944517 | + | 354 | WP_023261262.1 | YebY family protein | - |
| - | 1944617..1944762 | - | 146 | - | - | Antitoxin Detail |
| - | 1944657..1944760 | + | 104 | - | - | Toxin Detail |
| CIC23_RS09280 () | 1944890..1945969 | - | 1080 | WP_000087646.1 | hypothetical protein ; Integrase | Integrase |
| CIC23_RS09285 () | 1946002..1947153 | - | 1152 | Protein_1822 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| CIC23_RS09290 () | 1947142..1947333 | + | 192 | Protein_1823 | glycoside hydrolase family 19 protein | - |
| CIC23_RS09295 () | 1947387..1947920 | + | 534 | WP_001050883.1 | DUF2514 domain-containing protein | - |
| CIC23_RS09300 () | 1948177..1948344 | - | 168 | WP_000789530.1 | lytic enzyme | - |
| CIC23_RS09305 () | 1948409..1948597 | - | 189 | WP_001532317.1 | hypothetical protein | - |
| CIC23_RS09310 () | 1948652..1948912 | + | 261 | Protein_1827 | DUF1441 family protein | - |
| CIC23_RS22480 () | 1948914..1949129 | + | 216 | Protein_1828 | shikimate transporter | - |
| CIC23_RS09315 () | 1949139..1949426 | + | 288 | Protein_1829 | macro domain-containing protein | - |
| CIC23_RS09320 () | 1949439..1949950 | + | 512 | Protein_1830 | tail fiber assembly protein | - |
| CIC23_RS09325 () | 1950047..1950247 | - | 201 | WP_010989029.1 | PagK family vesicle-borne virulence factor | - |
| CIC23_RS22485 () | 1950637..1950817 | - | 181 | Protein_1832 | IS3 family transposase | - |
| CIC23_RS09330 () | 1950808..1950909 | + | 102 | Protein_1833 | arsenic transporter | - |
| CIC23_RS22490 () | 1951531..1951763 | + | 233 | Protein_1834 | helix-turn-helix domain-containing protein | - |
| CIC23_RS09345 () | 1952090..1952704 | - | 615 | WP_000848069.1 | disulfide bond formation protein B | - |
| CIC23_RS09350 () | 1952714..1952872 | - | 159 | WP_000480735.1 | DUF5993 family protein | - |
| CIC23_RS09355 () | 1953005..1953919 | - | 915 | WP_001233445.1 | DMT family transporter | - |
| CIC23_RS09360 () | 1955214..1955636 | - | 423 | Protein_1838 | hypothetical protein ; Integrase | Integrase |
| CIC23_RS09365 () | 1955706..1956900 | + | 1195 | Protein_1839 | IS256 family transposase IS285 | Transposase |
| CIC23_RS09370 () | 1957046..1957186 | - | 141 | WP_001617922.1 | hypothetical protein | - |
| CIC23_RS09375 () | 1957351..1957620 | - | 270 | WP_001752421.1 | hypothetical protein | - |
| CIC23_RS09380 () | 1957990..1958409 | + | 420 | WP_000354410.1 | GNAT family N-acetyltransferase | - |
| CIC23_RS09385 () | 1958792..1959268 | - | 477 | WP_000030945.1 | hypothetical protein | - |
| CIC23_RS09390 () | 1959584..1959979 | - | 396 | WP_000422887.1 | DUF1398 domain-containing protein | - |
| CIC23_RS09395 () | 1960664..1961386 | + | 723 | WP_000182072.1 | hypothetical protein | VF |
| CIC23_RS09400 () | 1961671..1961835 | + | 165 | WP_001134856.1 | membrane protein | - |
| CIC23_RS09405 () | 1962059..1962709 | + | 651 | WP_000986176.1 | protein-serine/threonine phosphatase | - |
| CIC23_RS09410 () | 1962728..1962919 | - | 192 | WP_000457836.1 | YebW family protein | - |
| CIC23_RS09415 () | 1963030..1963266 | - | 237 | WP_024131167.1 | YebV family protein | - |
| CIC23_RS09420 () | 1963384..1964823 | - | 1440 | WP_001670762.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| CIC23_RS09425 () | 1964901..1967534 | - | 2634 | WP_023261467.1 | hypothetical protein | VF |
| CIC23_RS09430 () | 1967503..1968786 | - | 1284 | WP_001207294.1 | membrane integrity lipid transport subunit YebS | - |
| CIC23_RS09435 () | 1968915..1969412 | + | 498 | WP_001518229.1 | GAF domain-containing protein | - |
| CIC23_RS09440 () | 1969510..1970196 | + | 687 | WP_000431401.1 | RNA chaperone ProQ | - |
| CIC23_RS09445 () | 1970216..1972264 | + | 2049 | WP_001091239.1 | carboxy terminal-processing peptidase | - |
| CIC23_RS09450 () | 1972457..1973338 | + | 882 | WP_000984498.1 | protease HtpX | - |
| CIC23_RS09455 () | 1973386..1974759 | - | 1374 | WP_000416139.1 | MFS transporter | - |
| CIC23_RS09460 () | 1974935..1975726 | + | 792 | WP_001262195.1 | DNA-binding transcriptional regulator KdgR | - |
| CIC23_RS09465 () | 1975938..1976177 | - | 240 | WP_001236777.1 | invasion protein YobH | - |
| CIC23_RS09470 () | 1976335..1976478 | + | 144 | WP_000714547.1 | PhoP/PhoQ regulator MgrB | - |
| CIC23_RS09475 () | 1976549..1976836 | + | 288 | WP_001000660.1 | YebO family protein | - |
| CIC23_RS09480 () | 1977485..1977628 | + | 144 | WP_001537930.1 | DUF2627 domain-containing protein | - |
| CIC23_RS09485 () | 1977641..1977850 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| CIC23_RS09490 () | 1978070..1979815 | + | 1746 | WP_000730322.1 | peptidoglycan glycosyltransferase FtsI | - |
| CIC23_RS09495 () | 1979881..1980690 | + | 810 | WP_000010923.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| CIC23_RS09500 () | 1980687..1981253 | - | 567 | WP_001518359.1 | manganese efflux pump MntP | - |
| CIC23_RS09505 () | 1981663..1982121 | - | 459 | WP_000156279.1 | DUF986 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|