MGE detailed information
MGE type: Mobilizable plasmid MGE length: 60959 bp
Accession: NZ_CP075067 Location: 1..60959 Organism: Escherichia coli strain EC_J_9 Replicon: plasmid pMCR_J9_7
Accession: NZ_CP075067 Location: 1..60959 Organism: Escherichia coli strain EC_J_9 Replicon: plasmid pMCR_J9_7
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4F96_RS25260 (H4F96_25270) | 407..733 | - | 327 | WP_000206697.1 | hypothetical protein | - |
| H4F96_RS25265 (H4F96_25275) | 735..1058 | - | 324 | WP_223666488.1 | hypothetical protein | - |
| H4F96_RS25910 | 1035..1175 | - | 141 | Protein_3 | hypothetical protein | - |
| H4F96_RS25270 (H4F96_25280) | 1195..1902 | - | 708 | WP_000108794.1 | hypothetical protein | - |
| H4F96_RS25275 (H4F96_25285) | 1904..2656 | - | 753 | WP_000797966.1 | conjugal transfer protein TraL | - |
| H4F96_RS25280 (H4F96_25290) | 2674..3075 | - | 402 | WP_021575837.1 | hypothetical protein | - |
| H4F96_RS25285 (H4F96_25295) | 3443..3784 | + | 342 | WP_000730722.1 | hypothetical protein | Relaxase |
| H4F96_RS25290 (H4F96_25300) | 3781..8094 | + | 4314 | WP_034169409.1 | hypothetical protein | - |
| H4F96_RS25295 (H4F96_25305) | 8315..9940 | + | 1626 | WP_049589868.1 | putative phosphatidylethanolamine transferase Mcr-1 | VF |
| H4F96_RS25300 (H4F96_25310) | 10012..10785 | + | 774 | WP_052234578.1 | PAP2 family protein | - |
| H4F96_RS25305 (H4F96_25315) | 10744..11184 | - | 441 | WP_000666084.1 | hypothetical protein | - |
| H4F96_RS25310 (H4F96_25320) | 11530..11736 | - | 207 | WP_000850854.1 | hemolysin expression modulator Hha | - |
| H4F96_RS25315 (H4F96_25325) | 11805..13970 | - | 2166 | WP_034169408.1 | type IA DNA topoisomerase | - |
| H4F96_RS25320 (H4F96_25330) | 13975..14550 | - | 576 | WP_001303470.1 | hypothetical protein | - |
| H4F96_RS25325 (H4F96_25335) | 14720..16396 | - | 1677 | WP_000289347.1 | PcfJ domain-containing protein | - |
| H4F96_RS25330 (H4F96_25340) | 16491..17023 | - | 533 | Protein_16 | thermonuclease family protein | - |
| H4F96_RS25335 (H4F96_25345) | 17053..17706 | - | 654 | WP_170855322.1 | hypothetical protein | - |
| H4F96_RS25340 (H4F96_25350) | 17718..18842 | - | 1125 | WP_000486716.1 | site-specific integrase | - |
| H4F96_RS25345 (H4F96_25355) | 19562..19717 | + | 156 | WP_001358489.1 | hypothetical protein | - |
| H4F96_RS25350 (H4F96_25360) | 20570..21844 | - | 1275 | WP_235883108.1 | hypothetical protein | VF |
| H4F96_RS25355 (H4F96_25365) | 21857..22492 | - | 636 | WP_000934977.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| H4F96_RS25360 (H4F96_25370) | 22496..22978 | - | 483 | WP_001258095.1 | hypothetical protein | VF |
| H4F96_RS25365 (H4F96_25375) | 23044..23607 | - | 564 | WP_034169414.1 | type 4 pilus major pilin | - |
| H4F96_RS25370 (H4F96_25380) | 23657..24766 | - | 1110 | WP_000974903.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| H4F96_RS25375 (H4F96_25385) | 24757..26295 | - | 1539 | WP_000466225.1 | Type II secretion system protein E | VF |
| H4F96_RS25380 (H4F96_25390) | 26320..26814 | - | 495 | WP_000912553.1 | hypothetical protein | VF |
| H4F96_RS25385 (H4F96_25395) | 26798..28108 | - | 1311 | WP_001454111.1 | type 4b pilus protein PilO2 | - |
| H4F96_RS25390 (H4F96_25400) | 28159..29802 | - | 1644 | WP_001035592.1 | Outer membrane lipoprotein BfpB | VF |
| H4F96_RS25395 (H4F96_25405) | 29795..30331 | - | 537 | WP_001220543.1 | sigma 54-interacting transcriptional regulator | - |
| H4F96_RS25400 (H4F96_25410) | 30378..32336 | - | 1959 | WP_015059539.1 | type IV secretory system conjugative DNA transfer family protein | - |
| H4F96_RS25405 (H4F96_25415) | 32352..33407 | - | 1056 | WP_001542006.1 | Type IV secretion system protein VirB11 | VF |
| H4F96_RS25410 (H4F96_25420) | 33426..34565 | - | 1140 | WP_034169415.1 | Type IV secretion system protein virB10 | VF |
| H4F96_RS25415 (H4F96_25425) | 34555..35325 | - | 771 | WP_000979242.1 | Type IV secretion system protein PtlF | VF |
| H4F96_RS25420 (H4F96_25430) | 35322..36056 | - | 735 | WP_000432282.1 | Type IV secretion system protein virB8 | VF |
| H4F96_RS25425 (H4F96_25435) | 36222..38579 | - | 2358 | WP_000548950.1 | VirB4 family type IV secretion system protein | - |
| H4F96_RS25430 (H4F96_25440) | 38585..38905 | - | 321 | WP_000362080.1 | VirB3 family type IV secretion system protein | - |
| H4F96_RS25915 | 38976..39266 | - | 291 | WP_000865479.1 | conjugal transfer protein | - |
| H4F96_RS25440 (H4F96_25450) | 39266..39850 | - | 585 | WP_001177117.1 | Type IV secretion system protein virB1 | VF |
| H4F96_RS25445 (H4F96_25455) | 39871..40269 | - | 399 | WP_001153669.1 | hypothetical protein | - |
| H4F96_RS25450 (H4F96_25460) | 40388..40825 | - | 438 | WP_034169416.1 | type IV pilus biogenesis protein PilM | - |
| H4F96_RS25455 (H4F96_25465) | 40831..42066 | - | 1236 | WP_034169417.1 | hypothetical protein | VF |
| H4F96_RS25460 (H4F96_25470) | 42069..42368 | - | 300 | WP_000835763.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| H4F96_RS25465 (H4F96_25475) | 42416..43225 | + | 810 | WP_024237698.1 | DUF5710 domain-containing protein | - |
| H4F96_RS25470 (H4F96_25480) | 43448..43672 | - | 225 | WP_000713562.1 | EexN family lipoprotein | - |
| H4F96_RS25475 (H4F96_25485) | 43681..44325 | - | 645 | WP_001310442.1 | hypothetical protein | VF |
| H4F96_RS25480 (H4F96_25490) | 44331..45326 | - | 996 | WP_001028540.1 | hypothetical protein | VF |
| H4F96_RS25485 (H4F96_25495) | 45330..45587 | - | 258 | WP_000739144.1 | hypothetical protein | - |
| H4F96_RS25490 (H4F96_25500) | 45584..45886 | - | 303 | WP_001360345.1 | hypothetical protein | - |
| H4F96_RS25495 (H4F96_25505) | 45867..46124 | - | 258 | WP_001542015.1 | hypothetical protein | - |
| H4F96_RS25500 (H4F96_25510) | 46157..46603 | - | 447 | WP_001243165.1 | hypothetical protein | - |
| H4F96_RS25505 (H4F96_25515) | 46614..46784 | - | 171 | WP_000550720.1 | hypothetical protein | - |
| H4F96_RS25510 (H4F96_25520) | 46788..47231 | - | 444 | WP_000964330.1 | NfeD family protein | - |
| H4F96_RS25515 (H4F96_25525) | 47605..48558 | - | 954 | WP_072089442.1 | SPFH domain-containing protein | - |
| H4F96_RS25520 (H4F96_25530) | 48585..48761 | - | 177 | WP_000753050.1 | hypothetical protein | - |
| H4F96_RS25525 (H4F96_25535) | 48754..48969 | - | 216 | WP_001127357.1 | DUF1187 family protein | - |
| H4F96_RS25530 (H4F96_25540) | 48962..49414 | - | 453 | WP_000101552.1 | CaiF/GrlA family transcriptional regulator | - |
| H4F96_RS25535 (H4F96_25545) | 50546..51574 | + | 1029 | WP_001175215.1 | plasmid replication initiator RepA | - |
| H4F96_RS25920 | 52275..52465 | + | 191 | Protein_58 | hypothetical protein | - |
| H4F96_RS25540 (H4F96_25550) | 52628..52789 | + | 162 | WP_001128311.1 | hypothetical protein | - |
| H4F96_RS25925 | 53115..53267 | + | 153 | Protein_60 | DUF5431 family protein | - |
| H4F96_RS25545 (H4F96_25555) | 53212..53334 | + | 123 | WP_223685802.1 | Hok/Gef family protein | - |
| H4F96_RS25550 (H4F96_25560) | 53484..54080 | + | 597 | WP_000125165.1 | ProQ/FINO family protein | - |
| H4F96_RS25555 (H4F96_25565) | 54098..54382 | - | 285 | WP_001162371.1 | hypothetical protein | - |
| H4F96_RS25560 (H4F96_25570) | 54456..55121 | - | 666 | WP_000532149.1 | division plane positioning ATPase MipZ | - |
| H4F96_RS25565 (H4F96_25575) | 55418..55594 | + | 177 | WP_249735946.1 | hypothetical protein | - |
| H4F96_RS25570 (H4F96_25580) | 55710..56039 | + | 330 | WP_001542022.1 | hypothetical protein | - |
| H4F96_RS25575 (H4F96_25585) | 56440..56955 | + | 516 | WP_001025393.1 | J domain-containing protein | - |
| H4F96_RS25580 (H4F96_25590) | 57059..57601 | + | 543 | WP_001083904.1 | hypothetical protein | - |
| H4F96_RS25585 (H4F96_25595) | 57598..57852 | + | 255 | WP_001230709.1 | hypothetical protein | Toxin Detail |
| H4F96_RS25590 (H4F96_25600) | 57849..58091 | + | 243 | WP_000151456.1 | hypothetical protein | Antitoxin Detail |
| H4F96_RS25595 (H4F96_25605) | 58364..58546 | + | 183 | WP_071599349.1 | hypothetical protein | - |
| H4F96_RS25600 (H4F96_25610) | 58662..58955 | + | 294 | WP_000673428.1 | hypothetical protein | - |
| H4F96_RS25605 (H4F96_25615) | 59444..59692 | + | 249 | WP_000513532.1 | type II toxin-antitoxin system HicA family toxin | - |
| H4F96_RS25610 (H4F96_25620) | 59689..60036 | + | 348 | WP_000681609.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| H4F96_RS25930 | 60124..60567 | - | 444 | WP_023223351.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|