MGE detailed information
MGE type: Genomic_island MGE length: 45142 bp
Accession: NZ_CP075062 Location: 2943710..2988851 Organism: Escherichia coli strain EC_J_9 Replicon: chromosome
Accession: NZ_CP075062 Location: 2943710..2988851 Organism: Escherichia coli strain EC_J_9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H4F96_RS14345 (2939176) | 2939176..2940333 | + | 1158 | WP_001070350.1 | glucans biosynthesis protein MdoC | - |
| H4F96_RS14350 (2940341) | 2940341..2941822 | - | 1482 | WP_001307714.1 | cardiolipin synthase ClsC | - |
| H4F96_RS14355 (2941764) | 2941764..2942297 | - | 534 | WP_000857399.1 | O-acetyl-ADP-ribose deacetylase | - |
| H4F96_RS14360 (2942392) | 2942392..2942702 | - | 311 | Protein_2825 | protein YmdA | - |
| H4F96_RS14365 (2942823) | 2942823..2943155 | - | 333 | WP_000992834.1 | curli assembly chaperone CsgC | - |
| H4F96_RS14370 (2943214) | 2943214..2943669 | - | 456 | WP_000771437.1 | curli major subunit CsgA | - |
| H4F96_RS14375 (2943710) | 2943710..2944165 | - | 456 | WP_000791650.1 | Minor curlin subunit | VF |
| H4F96_RS14380 (2944919) | 2944919..2945569 | + | 651 | WP_000481500.1 | CsgBAC operon transcriptional regulatory protein | VF |
| H4F96_RS14385 (2945574) | 2945574..2945963 | + | 390 | WP_000833288.1 | Curli production assembly/transport component CsgE | VF |
| H4F96_RS14390 (2945988) | 2945988..2946404 | + | 417 | WP_001264088.1 | Curli production assembly/transport component CsgF | VF |
| H4F96_RS14395 (2946431) | 2946431..2947264 | + | 834 | WP_001189321.1 | Curli production assembly/transport component CsgG | VF |
| H4F96_RS14400 (2947328) | 2947328..2947819 | - | 492 | WP_001471346.1 | DUF1097 domain-containing protein | - |
| H4F96_RS14405 (2947921) | 2947921..2948475 | - | 555 | WP_001001902.1 | molecular chaperone YcdY | - |
| H4F96_RS14410 (2948499) | 2948499..2949236 | - | 738 | WP_000283664.1 | zinc-binding phosphatase | - |
| H4F96_RS14415 (2949291) | 2949291..2950229 | - | 939 | WP_001471345.1 | glyoxylate/hydroxypyruvate reductase GhrA | - |
| H4F96_RS14425 (2950700) | 2950700..2951542 | - | 843 | WP_001274547.1 | DUF4942 domain-containing protein | - |
| H4F96_RS14430 (2951627) | 2951627..2951824 | - | 198 | WP_000839253.1 | DUF957 domain-containing protein | - |
| H4F96_RS14435 (2951841) | 2951841..2952329 | - | 489 | WP_001054233.1 | DUF5983 family protein | - |
| H4F96_RS14440 (2952326) | 2952326..2952709 | - | 384 | WP_000854686.1 | TA system toxin CbtA family protein | Toxin Detail |
| H4F96_RS14445 (2952803) | 2952803..2953171 | - | 369 | WP_001774606.1 | type IV toxin-antitoxin system cytoskeleton bundling-enhancing antitoxin CbeA | Antitoxin Detail |
| H4F96_RS14450 (2953221) | 2953221..2953865 | - | 645 | WP_213190754.1 | antitoxin of toxin-antitoxin stability system | - |
| H4F96_RS14455 (2953884) | 2953884..2954105 | - | 222 | WP_000692298.1 | DUF987 domain-containing protein | - |
| H4F96_RS14460 (2954168) | 2954168..2954644 | - | 477 | WP_001186726.1 | RadC family protein | - |
| H4F96_RS14465 (2954660) | 2954660..2955145 | - | 486 | WP_213190755.1 | antirestriction protein | - |
| H4F96_RS14470 (2955237) | 2955237..2956055 | - | 819 | WP_001234732.1 | DUF932 domain-containing protein | - |
| H4F96_RS14475 (2956155) | 2956155..2956388 | - | 234 | WP_001119719.1 | DUF905 family protein | - |
| H4F96_RS14480 (2956467) | 2956467..2956921 | - | 455 | Protein_2848 | IrmA family protein | - |
| H4F96_RS14485 (2956997) | 2956997..2959513 | - | 2517 | WP_063108327.1 | hypothetical protein | - |
| H4F96_RS14490 (2959634) | 2959634..2962480 | - | 2847 | WP_063108326.1 | Ag43/Cah family autotransporter adhesin | - |
| H4F96_RS14495 (2962852) | 2962852..2963724 | - | 873 | WP_063108325.1 | GTPase family protein | - |
| H4F96_RS14500 (2964390) | 2964390..2965073 | + | 684 | WP_000141343.1 | hypothetical protein | - |
| H4F96_RS14505 (2965428) | 2965428..2966213 | + | 786 | WP_061089765.1 | hypothetical protein | - |
| H4F96_RS14510 (2966375) | 2966375..2967127 | - | 753 | WP_059356353.1 | hypothetical protein | - |
| H4F96_RS14515 (2967571) | 2967571..2967825 | - | 255 | WP_154670580.1 | hypothetical protein | - |
| H4F96_RS14520 (2968107) | 2968107..2968346 | + | 240 | WP_001431807.1 | hypothetical protein | - |
| H4F96_RS14525 (2968386) | 2968386..2970824 | + | 2439 | WP_000985465.1 | type I restriction-modification system subunit M | - |
| H4F96_RS14530 (2970824) | 2970824..2972158 | + | 1335 | WP_000228013.1 | restriction endonuclease subunit S | - |
| H4F96_RS14535 (2972171) | 2972171..2972827 | + | 657 | WP_000312833.1 | toxin-antitoxin system toxin DNA ADP-ribosyl transferase DarT | Toxin Detail |
| H4F96_RS14540 (2972824) | 2972824..2973891 | + | 1068 | WP_000634203.1 | toxin-antitoxin system antitoxin DNA ADP-ribosyl glycohydrolase DarG | Antitoxin Detail |
| H4F96_RS14545 (2973910) | 2973910..2977005 | + | 3096 | WP_000108735.1 | HsdR family type I site-specific deoxyribonuclease | - |
| H4F96_RS14550 (2977005) | 2977005..2977721 | + | 717 | WP_001122107.1 | SprT family zinc-dependent metalloprotease | - |
| H4F96_RS14555 (2978077) | 2978077..2978670 | + | 594 | Protein_2863 | IS3 family transposase ISSd1 | Transposase |
| H4F96_RS14560 (2978913) | 2978913..2980211 | - | 1299 | WP_000262195.1 | anaerobic C4-dicarboxylate transporter | - |
| H4F96_RS14565 (2980277) | 2980277..2980996 | - | 720 | WP_000677245.1 | amino acid racemase | - |
| H4F96_RS14570 (2981347) | 2981347..2982285 | + | 939 | WP_000789104.1 | HTH-type transcriptional regulator YjiE | VF |
| H4F96_RS14575 (2982403) | 2982403..2982862 | - | 460 | Protein_2867 | IS200-IS605 family transposase IS200G | Transposase |
| H4F96_RS25755 (2983391) | 2983391..2983546 | - | 156 | Protein_2868 | tellurite resistance protein | - |
| H4F96_RS25760 (2983809) | 2983809..2984066 | - | 258 | Protein_2869 | replication endonuclease | - |
| H4F96_RS14585 (2984232) | 2984232..2984342 | + | 111 | Protein_2870 | transposase domain-containing protein | - |
| H4F96_RS14590 (2984474) | 2984474..2985487 | - | 1014 | WP_000107484.1 | aldose 1-epimerase family protein | - |
| H4F96_RS14595 (2985499) | 2985499..2986815 | - | 1317 | WP_000998348.1 | L-fucose:H+ symporter permease | - |
| H4F96_RS14600 (2986843) | 2986843..2987763 | - | 921 | WP_000350265.1 | ribokinase | - |
| H4F96_RS14605 (2988069) | 2988069..2988851 | + | 783 | WP_213190756.1 | DeoR family transcriptional regulator | - |
| H4F96_RS14610 (2988853) | 2988853..2989079 | - | 227 | Protein_2875 | acetolactate synthase small subunit | - |
| H4F96_RS14615 (2989759) | 2989759..2989896 | - | 138 | WP_001411495.1 | hypothetical protein | - |
| H4F96_RS14620 (2990046) | 2990046..2991215 | + | 1170 | Protein_2877 | UxaA family hydrolase | - |
| H4F96_RS14625 (2991278) | 2991278..2992102 | - | 825 | WP_000072197.1 | aga operon transcriptional regulator AgaR | - |
| H4F96_RS25765 (2992351) | 2992351..2992425 | + | 75 | Protein_2879 | aldolase | - |
| H4F96_RS25770 (2992432) | 2992432..2992689 | + | 258 | Protein_2880 | class II fructose-bisphosphate aldolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|