MGE detailed information
MGE type: Genomic_island MGE length: 20452 bp
Accession: NZ_CP074680 Location: 4167423..4187874 Organism: Escherichia coli strain MEI008 Replicon: chromosome
Accession: NZ_CP074680 Location: 4167423..4187874 Organism: Escherichia coli strain MEI008 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIM92_RS20125 (4162902) | 4162902..4163405 | - | 504 | WP_000870585.1 | type 1 fimbria minor subunit FimG | - |
| KIM92_RS20130 (4163418) | 4163418..4163948 | - | 531 | WP_001244827.1 | type 1 fimbria minor subunit FimF | - |
| KIM92_RS20135 (4163958) | 4163958..4166594 | - | 2637 | WP_000121002.1 | fimbrial usher FimD | - |
| KIM92_RS20140 (4166661) | 4166661..4167386 | - | 726 | WP_000066560.1 | type 1 fimbria chaperone FimC | - |
| KIM92_RS20145 (4167423) | 4167423..4167962 | - | 540 | WP_000824114.1 | hypothetical protein | VF |
| KIM92_RS20150 (4168027) | 4168027..4168575 | - | 549 | WP_000695564.1 | hypothetical protein | VF |
| KIM92_RS20155 (4169057) | 4169057..4169653 | - | 597 | WP_000044711.1 | Tyrosine recombinase XerC | VF |
| KIM92_RS20160 (4170131) | 4170131..4170733 | - | 603 | WP_000790583.1 | Tyrosine recombinase XerC | VF |
| KIM92_RS20165 (4172189) | 4172189..4172905 | + | 717 | WP_001295734.1 | N-acetylneuraminic acid outer membrane channel NanC | - |
| KIM92_RS20170 (4172925) | 4172925..4174031 | + | 1107 | WP_001309184.1 | N-acetylneuraminate epimerase | - |
| KIM92_RS20175 (4174096) | 4174096..4175076 | + | 981 | WP_000991438.1 | 9-O-acetyl-N-acetylneuraminic acid deacetylase | - |
| KIM92_RS20180 (4175186) | 4175186..4175391 | + | 206 | Protein_3949 | HNH endonuclease | - |
| KIM92_RS20185 (4175691) | 4175691..4176671 | - | 981 | WP_000019400.1 | IS5 family transposase IS5D | Transposase |
| KIM92_RS20190 (4176858) | 4176858..4178098 | - | 1241 | Protein_3951 | helicase YjhR | - |
| KIM92_RS20195 (4178214) | 4178214..4178345 | + | 132 | WP_001309182.1 | hypothetical protein | - |
| KIM92_RS20200 (4178836) | 4178836..4179093 | + | 258 | WP_001054376.1 | YjhX family toxin | Toxin Detail |
| KIM92_RS20205 (4179105) | 4179105..4179650 | + | 546 | WP_001309181.1 | N-acetyltransferase | Antitoxin Detail |
| KIM92_RS20210 (4179706) | 4179706..4180452 | + | 747 | WP_000354251.1 | class I SAM-dependent methyltransferase | - |
| KIM92_RS20215 (4180621) | 4180621..4180839 | + | 219 | Protein_3956 | hypothetical protein | - |
| KIM92_RS20220 (4180877) | 4180877..4180993 | + | 117 | Protein_3957 | VOC family protein | - |
| KIM92_RS20225 (4181238) | 4181238..4182359 | + | 1122 | WP_000010829.1 | M42 family metallopeptidase | - |
| KIM92_RS20230 (4182356) | 4182356..4182634 | + | 279 | WP_000722973.1 | PTS sugar transporter subunit IIB SgcB | - |
| KIM92_RS20235 (4182646) | 4182646..4183959 | + | 1314 | WP_000460843.1 | PTS sugar transporter subunit IIC SgcC | - |
| KIM92_RS20240 (4183972) | 4183972..4184778 | + | 807 | WP_000118626.1 | BtpA family protein SgcQ | - |
| KIM92_RS20245 (4184909) | 4184909..4185340 | + | 432 | WP_000606406.1 | SgcA family PTS sugar transporter subunit IIA | - |
| KIM92_RS20250 (4185352) | 4185352..4185984 | + | 633 | WP_000600622.1 | ribulose-phosphate 3 epimerase family protein | - |
| KIM92_RS20255 (4186001) | 4186001..4186783 | + | 783 | WP_000082780.1 | DeoR/GlpR family DNA-binding transcription regulator | - |
| KIM92_RS20260 (4187086) | 4187086..4187874 | + | 789 | WP_000251798.1 | IclR family transcriptional regulator | - |
| KIM92_RS20265 (4187879) | 4187879..4188784 | + | 906 | WP_000714563.1 | dihydrodipicolinate synthase family protein | - |
| KIM92_RS20270 (4188795) | 4188795..4190762 | + | 1968 | WP_000116326.1 | xylonate dehydratase YjhG | - |
| KIM92_RS20275 (4190869) | 4190869..4192218 | + | 1350 | WP_001128363.1 | GntP family permease | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|