MGE detailed information
MGE type: Prophage MGE length: 59435 bp
Accession: NZ_CP074676 Location: 266437..325871 Organism: Pseudomonas qingdaonensis strain S-1 Replicon: chromosome
Accession: NZ_CP074676 Location: 266437..325871 Organism: Pseudomonas qingdaonensis strain S-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KH389_RS01220 (KH389_01220) | 262207..264021 | - | 1815 | WP_081315192.1 | ATP-binding protein | - |
| KH389_RS01225 (KH389_01225) | 264166..265026 | - | 861 | WP_213606713.1 | dTDP-4-dehydrorhamnose reductase | - |
| KH389_RS01230 (KH389_01230) | 265023..265568 | - | 546 | WP_043861650.1 | dTDP-4-dehydrorhamnose 3,5-epimerase | - |
| KH389_RS01235 (KH389_01235) | 265559..266440 | - | 882 | WP_054915924.1 | glucose-1-phosphate thymidylyltransferase RfbA | - |
| KH389_RS01240 (KH389_01240) | 266437..267519 | - | 1083 | WP_043861652.1 | hypothetical protein | VF |
| KH389_RS01245 (KH389_01245) | 267644..268321 | - | 678 | WP_043861653.1 | metallophosphoesterase family protein | - |
| KH389_RS01250 (KH389_01250) | 268302..269279 | - | 978 | WP_054915926.1 | ATP-grasp domain-containing protein | - |
| KH389_RS01255 (KH389_01255) | 269276..270160 | - | 885 | WP_161493043.1 | NAD(P)-dependent oxidoreductase | - |
| KH389_RS01260 (KH389_01260) | 270157..270846 | - | 690 | WP_078481593.1 | WbqC family protein | - |
| KH389_RS01265 (KH389_01265) | 270981..273866 | + | 2886 | WP_213606714.1 | aminotransferase | - |
| KH389_RS01270 (KH389_01270) | 274065..274943 | + | 879 | WP_043861659.1 | N-carbamoylputrescine amidase | - |
| KH389_RS01275 (KH389_01275) | 274946..276052 | + | 1107 | WP_213606715.1 | agmatine deiminase | - |
| KH389_RS01280 (KH389_01280) | 276237..276437 | + | 201 | WP_078481589.1 | hypothetical protein | - |
| KH389_RS01285 (KH389_01285) | 276530..278620 | - | 2091 | WP_213606716.1 | TonB-dependent siderophore receptor | - |
| KH389_RS01290 (KH389_01290) | 279016..280305 | + | 1290 | WP_043861662.1 | OprD family porin | - |
| KH389_RS01295 (KH389_01295) | 280333..282000 | - | 1668 | WP_043861663.1 | FMN-binding glutamate synthase family protein | - |
| KH389_RS01300 (KH389_01300) | 282115..283005 | - | 891 | WP_078481583.1 | LysR family transcriptional regulator | - |
| KH389_RS01305 (KH389_01305) | 283103..284236 | + | 1134 | WP_213606717.1 | MFS transporter | - |
| KH389_RS01310 (KH389_01310) | 284415..285593 | + | 1179 | WP_213606718.1 | MFS transporter | - |
| KH389_RS01315 (KH389_01315) | 285587..286741 | - | 1155 | WP_213606719.1 | hypothetical protein | - |
| KH389_RS01320 (KH389_01320) | 286752..287915 | - | 1164 | WP_213606721.1 | hypothetical protein | - |
| KH389_RS01325 (KH389_01325) | 288064..288471 | + | 408 | WP_213606723.1 | hypothetical protein | - |
| KH389_RS01330 (KH389_01330) | 288529..289908 | - | 1380 | WP_213606725.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| KH389_RS01335 (KH389_01335) | 290288..291106 | - | 819 | WP_054915940.1 | AraC family transcriptional regulator | - |
| KH389_RS01340 (KH389_01340) | 291153..291770 | - | 618 | WP_043859804.1 | LysE family transporter | - |
| KH389_RS01345 (KH389_01345) | 292265..292558 | + | 294 | WP_213606727.1 | DUF3077 domain-containing protein | - |
| KH389_RS01350 (KH389_01350) | 292633..292980 | + | 348 | WP_213606729.1 | hypothetical protein | - |
| KH389_RS01355 (KH389_01355) | 293124..293621 | - | 498 | WP_213606731.1 | SMI1/KNR4 family protein | - |
| KH389_RS01360 (KH389_01360) | 293803..294630 | + | 828 | WP_213606732.1 | DUF2314 domain-containing protein | - |
| KH389_RS01365 (KH389_01365) | 294944..295231 | - | 288 | WP_043859808.1 | HigA family addiction module antitoxin | - |
| KH389_RS01370 (KH389_01370) | 295244..295522 | - | 279 | WP_043859809.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KH389_RS01375 (KH389_01375) | 296433..297398 | + | 966 | WP_213606733.1 | hypothetical protein | - |
| KH389_RS01380 (KH389_01380) | 297446..297994 | - | 549 | Protein_269 | hypothetical protein | - |
| KH389_RS01385 (KH389_01385) | 298154..298336 | + | 183 | WP_213606734.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KH389_RS01390 (KH389_01390) | 298366..298791 | + | 426 | WP_213606736.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| KH389_RS01395 (KH389_01395) | 299099..300427 | + | 1329 | WP_213606737.1 | hypothetical protein ; Integrase | Integrase |
| KH389_RS01400 (KH389_01400) | 300441..301127 | + | 687 | WP_213606738.1 | hypothetical protein | - |
| KH389_RS01405 (KH389_01405) | 301197..301469 | + | 273 | WP_213606739.1 | helix-turn-helix domain-containing protein | - |
| KH389_RS01410 (KH389_01410) | 301471..301788 | + | 318 | WP_213606740.1 | hypothetical protein | - |
| KH389_RS01415 (KH389_01415) | 302112..302393 | + | 282 | WP_213606741.1 | hypothetical protein | - |
| KH389_RS01420 (KH389_01420) | 302386..303273 | + | 888 | WP_213606742.1 | toprim domain-containing protein | - |
| KH389_RS01425 (KH389_01425) | 303270..305024 | + | 1755 | WP_213606744.1 | DUF927 domain-containing protein | - |
| KH389_RS01430 (KH389_01430) | 305587..307272 | + | 1686 | WP_213606746.1 | AAA family ATPase | - |
| KH389_RS01435 (KH389_01435) | 307346..308200 | + | 855 | WP_213606748.1 | DNA adenine methylase | - |
| KH389_RS01440 (KH389_01440) | 308256..309041 | + | 786 | WP_213606750.1 | nucleotidyltransferase domain-containing protein | - |
| KH389_RS01445 (KH389_01445) | 309789..310766 | - | 978 | Protein_282 | IS5 family transposase ISPa41 | Transposase |
| KH389_RS01450 (KH389_01450) | 310859..311167 | + | 309 | WP_213606752.1 | hypothetical protein | - |
| KH389_RS01455 (KH389_01455) | 311178..312116 | - | 939 | WP_213606754.1 | class A beta-lactamase | - |
| KH389_RS01460 (KH389_01460) | 312454..312921 | - | 468 | WP_213606756.1 | hypothetical protein | - |
| KH389_RS01465 (KH389_01465) | 313225..313704 | + | 480 | WP_213606757.1 | hypothetical protein | - |
| KH389_RS01470 (KH389_01470) | 313866..314447 | + | 582 | WP_213606759.1 | TIGR00730 family Rossman fold protein | - |
| KH389_RS01475 (KH389_01475) | 314717..315697 | - | 981 | WP_213605882.1 | IS5 family transposase ISPa41 | Transposase |
| KH389_RS01480 (KH389_01480) | 316101..316912 | + | 812 | Protein_289 | IS5 family transposase | - |
| KH389_RS01485 (KH389_01485) | 317047..317532 | - | 486 | WP_213606760.1 | helix-turn-helix transcriptional regulator | - |
| KH389_RS01490 (KH389_01490) | 317687..317992 | + | 306 | WP_213606762.1 | hypothetical protein | - |
| KH389_RS01500 (KH389_01500) | 318771..319034 | - | 264 | WP_054915796.1 | hypothetical protein | - |
| KH389_RS01505 (KH389_01505) | 319073..319453 | - | 381 | WP_043862226.1 | hypothetical protein | - |
| KH389_RS01510 (KH389_01510) | 319471..319677 | - | 207 | WP_043862225.1 | helix-turn-helix transcriptional regulator | - |
| KH389_RS01515 (KH389_01515) | 319687..320265 | - | 579 | WP_043862224.1 | hypothetical protein | - |
| KH389_RS01520 (KH389_01520) | 320787..321146 | + | 360 | WP_043862223.1 | multidrug/spermidine efflux SMR transporter subunit MdtJ | - |
| KH389_RS01525 (KH389_01525) | 321140..321469 | + | 330 | WP_213606764.1 | multidrug/spermidine efflux SMR transporter subunit MdtI | - |
| KH389_RS01530 (KH389_01530) | 321697..322905 | - | 1209 | WP_213606766.1 | methyltransferase | - |
| KH389_RS01535 (KH389_01535) | 322886..323575 | - | 690 | WP_213606767.1 | ABC transporter permease | - |
| KH389_RS01540 (KH389_01540) | 323572..324267 | - | 696 | WP_043862219.1 | ABC transporter permease | - |
| KH389_RS01545 (KH389_01545) | 324323..325084 | - | 762 | WP_043862218.1 | ABC transporter substrate-binding protein | - |
| KH389_RS01550 (KH389_01550) | 325098..325871 | - | 774 | WP_054915791.1 | hypothetical protein | VF |
| KH389_RS01555 (KH389_01555) | 326185..326619 | - | 435 | WP_043862216.1 | hypothetical protein | - |
| KH389_RS01560 (KH389_01560) | 326719..327129 | - | 411 | WP_054915790.1 | hypothetical protein | - |
| KH389_RS01570 (KH389_01570) | 327413..327685 | - | 273 | WP_043862214.1 | oxidative damage protection protein | - |
| KH389_RS01575 (KH389_01575) | 327682..328749 | - | 1068 | WP_043862213.1 | A/G-specific adenine glycosylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|