MGE detailed information
MGE type: Mobilizable plasmid MGE length: 40409 bp
Accession: NZ_CP074579 Location: 1..40409 Organism: Pseudomonas syringae strain Susan2139 Replicon: plasmid p_unamed1
Accession: NZ_CP074579 Location: 1..40409 Organism: Pseudomonas syringae strain Susan2139 Replicon: plasmid p_unamed1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KIJ28_RS25735 (KIJ28_25735) | 1..1314 | + | 1314 | WP_074809426.1 | replication initiation protein | - |
| KIJ28_RS25740 (KIJ28_25740) | 1453..1878 | + | 426 | WP_213632216.1 | S24 family peptidase | - |
| KIJ28_RS25745 (KIJ28_25745) | 1856..3154 | + | 1299 | WP_213632218.1 | Y-family DNA polymerase | - |
| KIJ28_RS25750 (KIJ28_25750) | 3291..5027 | + | 1737 | WP_249731737.1 | N-6 DNA methylase | - |
| KIJ28_RS25755 (KIJ28_25755) | 5027..6106 | + | 1080 | WP_058416855.1 | BsuBI/PstI family type II restriction endonuclease | - |
| KIJ28_RS25760 (KIJ28_25760) | 6118..6294 | + | 177 | WP_213632222.1 | hypothetical protein | - |
| KIJ28_RS25765 (KIJ28_25765) | 6328..6633 | + | 306 | WP_058416817.1 | hypothetical protein | - |
| KIJ28_RS25770 (KIJ28_25770) | 6677..6886 | + | 210 | WP_058416818.1 | carbon storage regulator | - |
| KIJ28_RS25775 (KIJ28_25775) | 6953..7174 | - | 222 | Protein_8 | Tn3 family transposase | - |
| KIJ28_RS26190 | 7194..7449 | - | 256 | Protein_9 | resolvase | - |
| KIJ28_RS26195 | 7609..7896 | + | 288 | WP_083515830.1 | hypothetical protein | - |
| KIJ28_RS25780 (KIJ28_25780) | 7990..8400 | + | 411 | WP_015061791.1 | hypothetical protein | - |
| KIJ28_RS25785 (KIJ28_25785) | 8737..8937 | + | 201 | WP_213632224.1 | hypothetical protein | - |
| KIJ28_RS25790 (KIJ28_25790) | 9049..9699 | + | 651 | WP_058416820.1 | AAA family ATPase | - |
| KIJ28_RS25795 (KIJ28_25795) | 9689..9976 | + | 288 | WP_058416821.1 | hypothetical protein | - |
| KIJ28_RS25800 (KIJ28_25800) | 10197..10838 | + | 642 | WP_058416822.1 | SOS response-associated peptidase | - |
| KIJ28_RS25805 (KIJ28_25805) | 11104..12930 | - | 1827 | WP_213632226.1 | ATP-binding protein | - |
| KIJ28_RS25810 (KIJ28_25810) | 13285..13980 | - | 696 | WP_213632228.1 | hypothetical protein | - |
| KIJ28_RS25815 (KIJ28_25815) | 13981..14847 | - | 867 | WP_249731738.1 | HAD family hydrolase | - |
| KIJ28_RS25820 (KIJ28_25820) | 14946..15905 | - | 960 | WP_213632230.1 | IS91 family transposase ISWz1 | Transposase |
| KIJ28_RS25825 (KIJ28_25825) | 16236..16484 | + | 249 | WP_011152898.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| KIJ28_RS25830 (KIJ28_25830) | 16497..16847 | + | 351 | WP_213632232.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KIJ28_RS25835 (KIJ28_25835) | 17350..17631 | - | 282 | WP_057432554.1 | hypothetical protein | - |
| KIJ28_RS25840 (KIJ28_25840) | 17642..20464 | - | 2823 | WP_249731739.1 | RHS repeat-associated core domain-containing protein | - |
| KIJ28_RS25845 (KIJ28_25845) | 20461..21951 | - | 1491 | WP_074910150.1 | DUF6531 domain-containing protein | - |
| KIJ28_RS25850 (KIJ28_25850) | 22180..22464 | - | 285 | WP_074910153.1 | RHS repeat domain-containing protein | - |
| KIJ28_RS26200 | 22558..22749 | + | 192 | WP_244526667.1 | DUF2513 domain-containing protein | - |
| KIJ28_RS25860 (KIJ28_25860) | 22983..23273 | + | 291 | WP_213632196.1 | hypothetical protein | - |
| KIJ28_RS25865 (KIJ28_25865) | 23350..24123 | - | 774 | WP_213632198.1 | Oxygen regulatory protein NreC | VF |
| KIJ28_RS25870 (KIJ28_25870) | 24232..25332 | + | 1101 | WP_213632200.1 | polyamine ABC transporter substrate-binding protein | - |
| KIJ28_RS25875 (KIJ28_25875) | 25432..25629 | + | 198 | WP_074910161.1 | hypothetical protein | - |
| KIJ28_RS25880 (KIJ28_25880) | 25649..26077 | - | 429 | WP_080490085.1 | helix-turn-helix transcriptional regulator | - |
| KIJ28_RS25885 (KIJ28_25885) | 26251..26763 | + | 513 | WP_074910164.1 | transcription termination/antitermination NusG family protein | - |
| KIJ28_RS25890 (KIJ28_25890) | 26852..27094 | + | 243 | WP_213632201.1 | hypothetical protein | - |
| KIJ28_RS25895 (KIJ28_25895) | 27107..27814 | + | 708 | WP_213632203.1 | Type IV secretion system protein virB1 | VF |
| KIJ28_RS25900 (KIJ28_25900) | 27814..28149 | + | 336 | WP_213632236.1 | conjugal transfer protein | - |
| KIJ28_RS25905 (KIJ28_25905) | 28162..28650 | + | 489 | WP_213632205.1 | VirB3 family type IV secretion system protein | - |
| KIJ28_RS25910 (KIJ28_25910) | 28553..30046 | + | 1494 | WP_249731736.1 | type IA DNA topoisomerase | - |
| KIJ28_RS25915 (KIJ28_25915) | 30073..30837 | + | 765 | WP_213632207.1 | hypothetical protein | - |
| KIJ28_RS25920 (KIJ28_25920) | 30902..31507 | + | 606 | WP_058398756.1 | single-stranded DNA-binding protein | - |
| KIJ28_RS25925 (KIJ28_25925) | 31814..32557 | + | 744 | WP_213632209.1 | StbB family protein | - |
| KIJ28_RS25930 (KIJ28_25930) | 32554..33126 | + | 573 | WP_213632211.1 | hypothetical protein | - |
| KIJ28_RS25935 (KIJ28_25935) | 33153..33692 | - | 540 | WP_213632212.1 | hypothetical protein | - |
| KIJ28_RS25940 (KIJ28_25940) | 33917..34642 | + | 726 | WP_213632214.1 | relaxosome protein | - |
| KIJ28_RS26205 | 34632..35330 | + | 699 | Protein_44 | hypothetical protein | Relaxase |
| KIJ28_RS26210 | 35629..36048 | + | 420 | WP_226439931.1 | hypothetical protein | Relaxase |
| KIJ28_RS26215 | 36363..36809 | + | 447 | Protein_46 | hypothetical protein | Relaxase |
| KIJ28_RS25950 (KIJ28_25950) | 37153..37968 | - | 816 | Protein_47 | hypothetical protein | - |
| KIJ28_RS25955 (KIJ28_25955) | 37965..38720 | + | 756 | Protein_48 | relaxase | - |
| KIJ28_RS25960 (KIJ28_25960) | 38850..39500 | + | 651 | WP_003407061.1 | AAA family ATPase | - |
| KIJ28_RS25965 (KIJ28_25965) | 39491..39844 | + | 354 | WP_003407059.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|