MGE detailed information

MGE type: Conjugative plasmid        MGE length: 157575 bp
Accession: NZ_CP074540        Location: 1..157575         Organism: Klebsiella pneumoniae strain S20_CRE20       Replicon: plasmid pCRE20_1


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KHV98_RS26925 (KHV98_26850) 19..894 + 876 WP_022644731.1 replication initiation protein -
KHV98_RS26930 (KHV98_26855) 1527..2153 + 627 WP_004197649.1 Iron-sulfur cluster carrier protein VF
KHV98_RS26935 2150..2452 + 303 WP_004197636.1 hypothetical protein -
KHV98_RS26940 (KHV98_26865) 2892..3686 - 795 WP_004197635.1 site-specific integrase -
KHV98_RS26945 (KHV98_26870) 3884..4900 - 1017 WP_020315256.1 hypothetical protein -
KHV98_RS26950 (KHV98_26875) 4897..5220 - 324 WP_022644730.1 hypothetical protein -
KHV98_RS26955 (KHV98_26880) 5247..5642 - 396 WP_017899885.1 hypothetical protein -
KHV98_RS26960 (KHV98_26885) 5811..6116 - 306 WP_001568026.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
KHV98_RS26965 (KHV98_26890) 6118..6336 - 219 WP_001568025.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
KHV98_RS26970 (KHV98_26895) 6889..7578 + 690 WP_004193995.1 hypothetical protein -
KHV98_RS26975 (KHV98_26900) 7610..8299 - 690 WP_020315560.1 RES family NAD+ phosphorylase -
KHV98_RS26980 (KHV98_26905) 8736..9005 + 270 WP_020804424.1 hypothetical protein -
KHV98_RS26985 (KHV98_26910) 8993..9568 + 576 WP_020317495.1 hypothetical protein -
KHV98_RS26990 (KHV98_26915) 9599..10093 + 495 WP_020802777.1 hypothetical protein -
KHV98_RS26995 (KHV98_26920) 10137..10505 + 369 WP_004197807.1 hypothetical protein -
KHV98_RS27000 (KHV98_26925) 10539..10742 + 204 WP_004197808.1 HHA domain-containing protein -
KHV98_RS27005 (KHV98_26930) 10756..10959 + 204 WP_004197809.1 hypothetical protein -
KHV98_RS27010 (KHV98_26935) 11141..12145 - 1005 WP_000427623.1 IS110 family transposase IS4321R Transposase
KHV98_RS27015 (KHV98_26940) 12224..15190 - 2967 WP_015065644.1 Tn3 family transposase TnpA_ISPa38 Transposase
KHV98_RS27020 (KHV98_26945) 15265..15555 + 291 WP_001247892.1 nucleotidyltransferase -
KHV98_RS27025 (KHV98_26950) 15552..15953 + 402 WP_001293886.1 DUF86 domain-containing protein -
KHV98_RS27030 (KHV98_26955) 15943..16299 + 357 WP_000215515.1 cupin domain-containing protein -
KHV98_RS27035 (KHV98_26960) 16554..16868 + 315 WP_000091613.1 hypothetical protein -
KHV98_RS27040 (KHV98_26965) 17295..18476 - 1182 WP_004194048.1 Na+/H+ antiporter NhaA -
KHV98_RS27045 19011..19103 + 93 Protein_24 SMR family transporter -
KHV98_RS27050 (KHV98_26970) 19136..19741 - 606 WP_000509966.1 Tn3 family transposase TnpR_Tn5403 Transposase
KHV98_RS27055 (KHV98_26975) 19836..22733 + 2898 WP_020802676.1 Tn3 family transposase TnpA_Tn5403 Transposase
KHV98_RS27060 (KHV98_26980) 22767..22898 + 132 Protein_27 integrase core domain-containing protein -
KHV98_RS27065 (KHV98_26985) 23195..28930 - 5736 WP_022644729.1 DUF4011 domain-containing protein -
KHV98_RS27070 (KHV98_26990) 29117..31159 - 2043 WP_009309939.1 DUF262 domain-containing protein -
KHV98_RS27075 (KHV98_26995) 31152..32603 - 1452 WP_000443938.1 DUF262 domain-containing protein -
KHV98_RS27080 (KHV98_27000) 32628..33521 - 894 Protein_31 IS3 family transposase ISLad1 Transposase
KHV98_RS27085 (KHV98_27005) 33643..33831 + 189 WP_000957857.1 hypothetical protein -
KHV98_RS27090 (KHV98_27010) 33841..35040 + 1200 WP_000948429.1 IS91 family transposase ISSbo1 Transposase
KHV98_RS27095 (KHV98_27015) 35209..36090 + 882 Protein_34 IS21 family transposase ISKpn7 Transposase
KHV98_RS27100 (KHV98_27020) 36087..36866 + 780 WP_004152394.1 IS21 family transposase ISKpn7 Transposase
KHV98_RS27105 (KHV98_27025) 37185..38066 + 882 WP_004152396.1 Carbapenem-hydrolyzing beta-lactamase KPC ARG
KHV98_RS27110 (KHV98_27030) 38316..39635 - 1320 WP_004152397.1 IS1182 family transposase ISKpn6 Transposase
KHV98_RS27115 39817..40200 - 384 WP_022644889.1 hypothetical protein -
KHV98_RS27120 (KHV98_27040) 40230..40422 + 193 Protein_39 MFS transporter -
KHV98_RS27125 (KHV98_27045) 40547..40918 + 372 WP_004196359.1 hypothetical protein -
KHV98_RS27130 (KHV98_27050) 40981..41901 + 921 WP_004196315.1 hypothetical protein -
KHV98_RS27135 (KHV98_27055) 41955..42713 + 759 WP_004196325.1 hypothetical protein -
KHV98_RS27140 (KHV98_27060) 42947..44245 + 1299 WP_004196314.1 MFS transporter -
KHV98_RS27145 (KHV98_27065) 44351..44620 + 270 WP_004196355.1 nickel-sensing transcriptional repressor NcrB -
KHV98_RS27150 (KHV98_27070) 44633..45763 + 1131 WP_004196366.1 Ni(II)/Co(II) efflux transporter permease subunit NcrC -
KHV98_RS27155 (KHV98_27075) 45925..46347 + 423 WP_032072095.1 nickel resistance OB fold protein NcrY -
KHV98_RS27160 (KHV98_27080) 46603..47943 - 1341 WP_004196353.1 ISNCY family transposase ISCARN112 Transposase
KHV98_RS27165 (KHV98_27085) 48032..49564 + 1533 WP_015065592.1 IS3 family transposase ISKpn38 Transposase
KHV98_RS27170 (KHV98_27090) 49998..52508 - 2511 WP_022644890.1 S8 family peptidase -
KHV98_RS27175 (KHV98_27095) 52486..53526 - 1041 WP_022644891.1 ATP-binding protein -
KHV98_RS27185 (KHV98_27105) 55260..55586 - 327 WP_015632484.1 hypothetical protein -
KHV98_RS27190 (KHV98_27110) 55583..56311 - 729 WP_022644893.1 plasmid SOS inhibition protein A -
KHV98_RS27195 (KHV98_27115) 56308..56739 - 432 WP_015632482.1 conjugation system SOS inhibitor PsiB -
KHV98_RS27200 (KHV98_27120) 56784..58784 - 2001 WP_022644894.1 ParB/RepB/Spo0J family partition protein -
KHV98_RS27205 (KHV98_27125) 58853..59101 - 249 WP_022644895.1 DUF905 domain-containing protein -
KHV98_RS27210 (KHV98_27130) 59150..59692 - 543 WP_022644896.1 single-stranded DNA-binding protein -
KHV98_RS27215 (KHV98_27135) 60367..60687 - 321 WP_022644897.1 hypothetical protein -
KHV98_RS27220 (KHV98_27140) 60723..60977 - 255 WP_025404029.1 DNA polymerase III subunit theta -
KHV98_RS27225 (KHV98_27145) 61171..61362 - 192 WP_022644899.1 hypothetical protein -
KHV98_RS27230 (KHV98_27150) 61405..61911 - 507 WP_022644900.1 antirestriction protein ArdA -
KHV98_RS27235 (KHV98_27155) 61956..62384 - 429 WP_025404028.1 antirestriction protein -
KHV98_RS27240 (KHV98_27160) 63065..63832 - 768 WP_032072058.1 hypothetical protein -
KHV98_RS27245 (KHV98_27165) 63886..64305 - 420 WP_022644903.1 DUF1380 family protein -
KHV98_RS27250 (KHV98_27170) 64315..64536 - 222 WP_022644904.1 hypothetical protein -
KHV98_RS27255 (KHV98_27175) 64536..65237 - 702 WP_004152355.1 DNA methylase -
KHV98_RS27260 65309..65478 - 170 Protein_67 hypothetical protein -
KHV98_RS27265 (KHV98_27185) 65623..65958 - 336 WP_022644905.1 hypothetical protein -
KHV98_RS27270 (KHV98_27190) 65955..66188 - 234 Protein_69 hypothetical protein -
KHV98_RS27275 (KHV98_27195) 66223..67155 - 933 WP_022644906.1 DUF1281 domain-containing protein -
KHV98_RS27280 (KHV98_27200) 67591..67821 - 231 WP_022644907.1 hypothetical protein -
KHV98_RS27285 (KHV98_27205) 68025..68270 + 246 WP_022644908.1 DinI-like family protein -
KHV98_RS27290 (KHV98_27210) 68255..68716 + 462 WP_022644909.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KHV98_RS27295 (KHV98_27215) 68728..69999 + 1272 WP_022644910.1 Y-family DNA polymerase -
KHV98_RS27300 (KHV98_27220) 70101..70301 + 201 WP_022644911.1 hypothetical protein -
KHV98_RS27305 (KHV98_27225) 70494..70769 - 276 WP_032072061.1 hypothetical protein -
KHV98_RS27310 (KHV98_27230) 70760..71407 - 648 WP_022644912.1 AAA family ATPase -
KHV98_RS27315 (KHV98_27235) 71737..72255 - 519 WP_022644913.1 hypothetical protein -
KHV98_RS27320 (KHV98_27240) 72795..73382 + 588 WP_022644914.1 Tn3 family transposase TnpR_ISSba14 Transposase
KHV98_RS27325 (KHV98_27245) 73490..74443 + 954 WP_022644915.1 Recombination-promoting nuclease RpnA VF
KHV98_RS27330 (KHV98_27250) 74483..75064 - 582 WP_032408940.1 DUF2913 family protein -
KHV98_RS27335 (KHV98_27255) 75433..76338 - 906 WP_022644917.1 hypothetical protein -
KHV98_RS27340 (KHV98_27260) 77354..78373 - 1020 WP_032408924.1 plasmid replication initiator RepA -
KHV98_RS27345 (KHV98_27270) 78686..78943 - 258 WP_022644919.1 replication regulatory protein RepA -
KHV98_RS27350 (KHV98_27275) 79075..79632 - 558 WP_022644920.1 Phospholipase D VF
KHV98_RS27355 79730..80038 - 309 WP_022644921.1 hypothetical protein -
KHV98_RS27360 (KHV98_27280) 80035..80685 - 651 WP_022644922.1 DUF2726 domain-containing protein -
KHV98_RS27365 (KHV98_27285) 80691..81314 - 624 WP_022644923.1 hypothetical protein -
KHV98_RS27370 (KHV98_27290) 81364..81966 - 603 WP_072216873.1 PIN domain-containing protein -
KHV98_RS27375 (KHV98_27295) 82127..82720 - 594 WP_022644924.1 fertility inhibition protein FinO -
KHV98_RS27380 (KHV98_27300) 82877..83602 - 726 WP_032072081.1 type-F conjugative transfer system pilin acetylase TraX -
KHV98_RS27385 (KHV98_27305) 83683..88944 - 5262 WP_022644926.1 Multifunctional conjugation protein TraI Relaxase
KHV98_RS27390 (KHV98_27310) 88944..91256 - 2313 WP_032072078.1 type IV conjugative transfer system coupling protein TraD -
KHV98_RS27395 (KHV98_27315) 91385..92074 - 690 WP_022644928.1 hypothetical protein -
KHV98_RS27400 (KHV98_27320) 92266..92997 - 732 WP_004152622.1 conjugal transfer complement resistance protein TraT -
KHV98_RS27405 (KHV98_27325) 93181..93729 - 549 WP_004152623.1 conjugal transfer entry exclusion protein TraS -
KHV98_RS27410 (KHV98_27330) 93742..96591 - 2850 WP_004152624.1 conjugal transfer mating-pair stabilization protein TraG -
KHV98_RS27415 (KHV98_27335) 96591..97970 - 1380 WP_073546760.1 conjugal transfer pilus assembly protein TraH -
KHV98_RS27420 (KHV98_27340) 97948..98391 - 444 WP_004194305.1 F-type conjugal transfer protein TrbF -
KHV98_RS27425 (KHV98_27345) 98437..98994 - 558 WP_022644930.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KHV98_RS27430 (KHV98_27350) 98966..99205 - 240 WP_004144400.1 type-F conjugative transfer system pilin chaperone TraQ -
KHV98_RS27435 (KHV98_27355) 99216..99968 - 753 WP_004152677.1 type-F conjugative transfer system pilin assembly protein TraF -
KHV98_RS27440 (KHV98_27360) 99989..100315 - 327 WP_004152676.1 hypothetical protein -
KHV98_RS27445 (KHV98_27365) 100328..100576 - 249 WP_022644931.1 hypothetical protein -
KHV98_RS27450 (KHV98_27370) 100554..100808 - 255 WP_004152674.1 conjugal transfer protein TrbE -
KHV98_RS27455 (KHV98_27375) 100840..102795 - 1956 WP_022644932.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KHV98_RS27460 (KHV98_27380) 102854..103492 - 639 WP_022644933.1 type-F conjugative transfer system pilin assembly protein TrbC -
KHV98_RS27465 (KHV98_27385) 103505..104494 - 990 WP_015632509.1 conjugal transfer pilus assembly protein TraU -
KHV98_RS27470 (KHV98_27390) 104491..104892 - 402 WP_022644934.1 hypothetical protein -
KHV98_RS27475 (KHV98_27395) 104927..105562 - 636 WP_020325113.1 type-F conjugative transfer system protein TraW -
KHV98_RS27480 (KHV98_27400) 105559..105951 - 393 WP_022644935.1 type-F conjugative transfer system protein TrbI -
KHV98_RS27485 (KHV98_27405) 105951..108590 - 2640 WP_022644936.1 type IV secretion system protein TraC -
KHV98_RS27490 (KHV98_27410) 108662..109060 - 399 WP_011977783.1 hypothetical protein -
KHV98_RS27495 (KHV98_27415) 109068..109457 - 390 WP_004153076.1 hypothetical protein -
KHV98_RS27500 (KHV98_27420) 109500..109904 - 405 WP_004152503.1 hypothetical protein -
KHV98_RS27505 (KHV98_27425) 109971..110282 - 312 WP_004152502.1 hypothetical protein -
KHV98_RS27510 (KHV98_27430) 110283..110501 - 219 WP_004152501.1 hypothetical protein -
KHV98_RS27515 (KHV98_27435) 110607..111017 - 411 WP_004152499.1 hypothetical protein -
KHV98_RS27520 (KHV98_27440) 111149..111733 - 585 WP_004161368.1 type IV conjugative transfer system lipoprotein TraV -
KHV98_RS27525 (KHV98_27445) 111847..113271 - 1425 WP_022644937.1 F-type conjugal transfer pilus assembly protein TraB -
KHV98_RS27530 (KHV98_27450) 113271..114011 - 741 WP_004152497.1 type-F conjugative transfer system secretin TraK -
KHV98_RS27535 (KHV98_27455) 113998..114564 - 567 WP_004144423.1 type IV conjugative transfer system protein TraE -
KHV98_RS27540 (KHV98_27460) 114584..114889 - 306 WP_004144424.1 type IV conjugative transfer system protein TraL -
KHV98_RS27545 (KHV98_27465) 114903..115271 - 369 WP_004194426.1 type IV conjugative transfer system pilin TraA -
KHV98_RS27550 (KHV98_27470) 115340..115540 - 201 WP_032072063.1 TraY domain-containing protein -
KHV98_RS27555 (KHV98_27475) 115625..116326 - 702 WP_022644938.1 hypothetical protein -
KHV98_RS27560 (KHV98_27480) 116561..116953 - 393 WP_022644939.1 conjugal transfer relaxosome DNA-binding protein TraM -
KHV98_RS27565 (KHV98_27485) 117459..117881 + 423 WP_072205880.1 hypothetical protein VF
KHV98_RS27570 (KHV98_27490) 117905..118447 - 543 WP_022644941.1 antirestriction protein -
KHV98_RS27575 118796..119032 - 237 Protein_130 SAM-dependent DNA methyltransferase -
KHV98_RS27580 (KHV98_27500) 119080..119226 - 147 WP_022644943.1 hypothetical protein -
KHV98_RS27585 (KHV98_27505) 119319..119666 - 348 WP_022644944.1 hypothetical protein -
KHV98_RS27590 (KHV98_27510) 119722..120060 - 339 WP_022644945.1 hypothetical protein -
KHV98_RS27595 (KHV98_27515) 120843..121718 - 876 WP_022644715.1 DUF4942 domain-containing protein -
KHV98_RS27600 (KHV98_27520) 121767..121997 - 231 WP_020321344.1 hypothetical protein -
KHV98_RS27605 (KHV98_27525) 122092..122319 - 228 WP_022644716.1 hypothetical protein -
KHV98_RS27610 122649..122745 + 97 Protein_137 hypothetical protein -
KHV98_RS27615 (KHV98_27530) 123135..123458 - 324 WP_020314937.1 hypothetical protein -
KHV98_RS27620 (KHV98_27535) 123455..124183 - 729 WP_020314934.1 plasmid SOS inhibition protein A -
KHV98_RS27625 (KHV98_27540) 124180..124614 - 435 WP_086556807.1 conjugation system SOS inhibitor PsiB -
KHV98_RS27630 (KHV98_27545) 124655..126655 - 2001 WP_020314932.1 ParB/RepB/Spo0J family partition protein -
KHV98_RS27635 (KHV98_27550) 126724..126972 - 249 WP_020314938.1 DUF905 domain-containing protein -
KHV98_RS27640 (KHV98_27555) 127022..127579 - 558 WP_020314935.1 single-stranded DNA-binding protein -
KHV98_RS27645 127863..127960 + 98 Protein_144 hypothetical protein -
KHV98_RS27650 128346..128450 - 105 Protein_145 DNA polymerase III subunit theta -
KHV98_RS27655 (KHV98_27565) 128658..128849 - 192 WP_020314643.1 hypothetical protein -
KHV98_RS27660 (KHV98_27570) 128892..129398 - 507 WP_020314633.1 antirestriction protein ArdA -
KHV98_RS27665 (KHV98_27575) 129444..129872 - 429 WP_020314632.1 antirestriction protein -
KHV98_RS27670 (KHV98_27580) 130297..131064 - 768 WP_020314640.1 hypothetical protein -
KHV98_RS27675 (KHV98_27585) 131111..131521 - 411 WP_020314645.1 DUF1380 family protein -
KHV98_RS27680 (KHV98_27590) 131567..131788 - 222 WP_020314641.1 hypothetical protein -
KHV98_RS27685 (KHV98_27595) 131788..132489 - 702 WP_020314651.1 DNA methyltransferase -
KHV98_RS27690 (KHV98_27600) 132561..132754 - 194 Protein_153 hypothetical protein -
KHV98_RS27695 (KHV98_27605) 132924..133154 - 231 WP_020314631.1 hypothetical protein -
KHV98_RS27700 (KHV98_27610) 133358..133603 + 246 WP_020314635.1 DinI-like family protein -
KHV98_RS27705 (KHV98_27615) 133588..134049 + 462 WP_022644717.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KHV98_RS27710 (KHV98_27620) 134061..135335 + 1275 WP_020314652.1 Y-family DNA polymerase -
KHV98_RS27715 (KHV98_27625) 135510..135737 - 228 WP_020314634.1 hypothetical protein -
KHV98_RS27720 (KHV98_27630) 135782..136408 - 627 WP_022644718.1 ParA family protein -
KHV98_RS27725 (KHV98_27635) 137006..137626 + 621 WP_020314642.1 Tn3 family transposase TnpR_TnEc1 Transposase
KHV98_RS27730 (KHV98_27640) 137646..137912 + 267 WP_022644719.1 hypothetical protein -
KHV98_RS27735 (KHV98_27645) 138033..138986 + 954 WP_020314639.1 Recombination-promoting nuclease RpnA VF
KHV98_RS27740 (KHV98_27650) 138983..139594 - 612 WP_020314646.1 DUF2913 family protein -
KHV98_RS27745 (KHV98_27655) 139912..140190 - 279 WP_020314648.1 hypothetical protein -
KHV98_RS27750 (KHV98_27660) 140650..141672 - 1023 WP_001567660.1 IS110 family transposase ISSm1 Transposase
KHV98_RS27755 (KHV98_27665) 141696..144734 - 3039 WP_022644720.1 Tn3 family transposase TnpA_TnEc1 Transposase
KHV98_RS27760 (KHV98_27670) 144902..145537 + 636 WP_000470624.1 Tn3 family transposase TnpR_TnEc1 Transposase
KHV98_RS27765 (KHV98_27675) 145565..146401 - 837 WP_009652884.1 S-formylglutathione hydrolase -
KHV98_RS27770 (KHV98_27680) 146467..146865 - 399 WP_000235177.1 VOC family protein -
KHV98_RS27775 (KHV98_27685) 146907..148016 - 1110 WP_000842086.1 S-(hydroxymethyl)glutathione dehydrogenase -
KHV98_RS27780 (KHV98_27690) 148047..148322 - 276 WP_001141270.1 formaldehyde-responsive transcriptional repressor FrmR -
KHV98_RS27785 (KHV98_27695) 148676..149299 + 624 Protein_172 IS110 family transposase ISSm1 Transposase
KHV98_RS27790 (KHV98_27700) 149335..152340 - 3006 WP_022644723.1 Tn3 family transposase TnpA_Tn3 Transposase
KHV98_RS27795 (KHV98_27705) 152504..153061 + 558 WP_001235713.1 Tn3 family transposase TnpR_Tn3 Transposase
KHV98_RS27800 (KHV98_27710) 153244..153693 + 450 Protein_175 class A beta-lactamase -
KHV98_RS27805 (KHV98_27715) 153757..154461 + 705 WP_001067855.1 IS6 family transposase IS26 Transposase
KHV98_RS27810 (KHV98_27720) 154654..154998 + 345 Protein_177 GNAT family N-acetyltransferase -
KHV98_RS27815 (KHV98_27725) 155117..155305 + 189 WP_000957857.1 hypothetical protein -
KHV98_RS27820 (KHV98_27730) 155315..156514 + 1200 WP_000948429.1 IS91 family transposase ISSbo1 Transposase
KHV98_RS27825 (KHV98_27735) 156687..157178 + 492 Protein_180 DUF4113 domain-containing protein -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance