MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 64327 bp
Accession: NZ_CP074430 Location: 1..64327 Organism: Salmonella sp. SJTUF14523 Replicon: plasmid p14523B
Accession: NZ_CP074430 Location: 1..64327 Organism: Salmonella sp. SJTUF14523 Replicon: plasmid p14523B
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFD69_RS23135 (KFD69_23120) | 1..486 | + | 486 | WP_000905606.1 | membrane protein | - |
| KFD69_RS23140 (KFD69_23125) | 763..1050 | - | 288 | WP_071530243.1 | hypothetical protein | - |
| KFD69_RS23145 (KFD69_23130) | 1206..1766 | + | 561 | WP_000900095.1 | Invasin | VF |
| KFD69_RS23150 (KFD69_23135) | 1833..2183 | - | 351 | WP_001541541.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| KFD69_RS23155 (KFD69_23140) | 2240..2665 | + | 426 | WP_000064919.1 | IS200-IS605 family transposase ISEc46 | Transposase |
| KFD69_RS23160 (KFD69_23145) | 2792..3442 | - | 651 | WP_001676646.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| KFD69_RS23165 (KFD69_23150) | 3704..4429 | - | 726 | WP_001122242.1 | MAPK phosphothreonine lyase | VF |
| KFD69_RS23170 (KFD69_23155) | 4710..6485 | - | 1776 | WP_001676648.1 | Mono(ADP-ribosyl)transferase SpvB | VF |
| KFD69_RS23175 (KFD69_23160) | 6537..6704 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| KFD69_RS23180 (KFD69_23165) | 6667..7434 | - | 768 | WP_001676649.1 | virulence protein SpvA | - |
| KFD69_RS23185 (KFD69_23170) | 7608..7772 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| KFD69_RS23190 (KFD69_23175) | 7946..8839 | - | 894 | WP_000346690.1 | virulence genes transcriptional activator SpvR | - |
| KFD69_RS23195 (KFD69_23180) | 9447..10484 | + | 1038 | WP_001121400.1 | IS630 family transposase ISEc33 | Transposase |
| KFD69_RS23200 (KFD69_23185) | 10673..11698 | - | 1026 | WP_077907510.1 | ExeA family protein | - |
| KFD69_RS23205 (KFD69_23190) | 11631..13295 | - | 1665 | WP_000098781.1 | IS481 family transposase ISAzs36 | Transposase |
| KFD69_RS23210 (KFD69_23195) | 13279..13839 | - | 561 | WP_001240330.1 | Tn3 family transposase TnBth3 | Transposase |
| KFD69_RS23215 (KFD69_23200) | 14046..14786 | - | 741 | WP_001541566.1 | carbonic anhydrase family protein | - |
| KFD69_RS23220 (KFD69_23205) | 15441..15929 | - | 489 | WP_001135409.1 | hypothetical protein | - |
| KFD69_RS23225 (KFD69_23210) | 16187..17302 | + | 1116 | WP_001247117.1 | DNA-binding protein | - |
| KFD69_RS23230 (KFD69_23215) | 17388..17804 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| KFD69_RS23235 (KFD69_23220) | 17907..18323 | + | 417 | WP_000988946.1 | hypothetical protein | - |
| KFD69_RS23240 (KFD69_23225) | 18380..18985 | + | 606 | WP_000176303.1 | DUF2913 family protein | - |
| KFD69_RS23245 (KFD69_23230) | 18982..19923 | - | 942 | WP_000728919.1 | Recombination-promoting nuclease RpnA | VF |
| KFD69_RS23250 (KFD69_23235) | 20338..21543 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| KFD69_RS23255 (KFD69_23240) | 21543..22517 | + | 975 | WP_000064277.1 | ParB family protein | - |
| KFD69_RS23260 (KFD69_23245) | 22599..23873 | - | 1275 | WP_000457542.1 | Y-family DNA polymerase | - |
| KFD69_RS23265 (KFD69_23250) | 23873..24295 | - | 423 | WP_000925628.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KFD69_RS23270 (KFD69_23255) | 24596..26317 | + | 1722 | Protein_28 | ParB/RepB/Spo0J family partition protein | - |
| KFD69_RS23975 | 26357..26458 | + | 102 | Protein_29 | conjugation system SOS inhibitor PsiB family protein | - |
| KFD69_RS23280 (KFD69_23265) | 26461..27117 | + | 657 | Protein_30 | plasmid SOS inhibition protein A | - |
| KFD69_RS23285 (KFD69_23270) | 27323..28183 | - | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KFD69_RS23290 (KFD69_23275) | 28366..28923 | - | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| KFD69_RS23295 (KFD69_23280) | 29087..32092 | + | 3006 | WP_001143760.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KFD69_RS23300 (KFD69_23285) | 32321..32479 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| KFD69_RS23305 (KFD69_23290) | 32582..33400 | + | 819 | Protein_35 | DUF932 domain-containing protein | - |
| KFD69_RS23310 (KFD69_23295) | 33711..34181 | - | 471 | WP_015056628.1 | hypothetical protein | VF |
| KFD69_RS23315 (KFD69_23300) | 34597..34977 | + | 381 | WP_001151546.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KFD69_RS23320 (KFD69_23305) | 35171..35856 | + | 686 | Protein_38 | PAS domain-containing protein | - |
| KFD69_RS23325 (KFD69_23310) | 35950..36177 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| KFD69_RS23330 (KFD69_23315) | 36219..36581 | + | 363 | WP_001274199.1 | type IV conjugative transfer system pilin TraA | - |
| KFD69_RS23335 (KFD69_23320) | 36596..36907 | + | 312 | WP_000012130.1 | type IV conjugative transfer system protein TraL | - |
| KFD69_RS23340 (KFD69_23325) | 36929..37495 | + | 567 | WP_001679518.1 | type IV conjugative transfer system protein TraE | - |
| KFD69_RS23345 (KFD69_23330) | 37482..38222 | + | 741 | WP_001230718.1 | type-F conjugative transfer system secretin TraK | - |
| KFD69_RS23350 (KFD69_23335) | 38222..39643 | + | 1422 | WP_000146697.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KFD69_RS23355 (KFD69_23340) | 39633..40229 | + | 597 | WP_000527901.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KFD69_RS23360 (KFD69_23345) | 40207..40431 | + | 225 | WP_016716015.1 | DUF2689 domain-containing protein | - |
| KFD69_RS23365 (KFD69_23350) | 40428..40942 | + | 515 | Protein_47 | type IV conjugative transfer system lipoprotein TraV | - |
| KFD69_RS23370 (KFD69_23355) | 41022..41444 | + | 423 | Protein_48 | fertility inhibition protein FinO | - |
| KFD69_RS23980 | 41561..41842 | + | 282 | Protein_49 | disulfide bond formation protein DsbA | - |
| KFD69_RS23985 | 42123..42683 | + | 561 | Protein_50 | phospholipase D family protein | - |
| KFD69_RS23390 (KFD69_23375) | 42794..43060 | + | 267 | WP_016710725.1 | replication regulatory protein RepA | - |
| KFD69_RS23395 (KFD69_23380) | 43310..43387 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| KFD69_RS23400 (KFD69_23385) | 43368..44249 | + | 882 | WP_001676666.1 | incFII family plasmid replication initiator RepA | - |
| KFD69_RS23405 (KFD69_23390) | 45132..45326 | + | 195 | Protein_54 | SdiA-regulated domain-containing protein | - |
| KFD69_RS23410 (KFD69_23395) | 45423..46169 | - | 747 | WP_000417897.1 | AraC family transcriptional regulator | - |
| KFD69_RS23415 (KFD69_23400) | 46435..46992 | - | 558 | WP_000725064.1 | Attachment invasion locus protein | VF |
| KFD69_RS23420 (KFD69_23405) | 47082..47927 | - | 846 | WP_001701740.1 | YjiK family protein | - |
| KFD69_RS23425 (KFD69_23410) | 47978..48124 | - | 147 | WP_001141717.1 | hypothetical protein | - |
| KFD69_RS23430 (KFD69_23415) | 48114..48770 | - | 657 | WP_077907617.1 | DsbA family protein | - |
| KFD69_RS23435 (KFD69_23420) | 49014..49364 | - | 351 | WP_000135399.1 | Transcriptional regulatory protein RcsB | VF |
| KFD69_RS23440 (KFD69_23425) | 49349..49561 | - | 213 | WP_000004289.1 | hypothetical protein | VF |
| KFD69_RS23445 (KFD69_23430) | 49821..50762 | - | 942 | WP_223156944.1 | hypothetical protein | - |
| KFD69_RS23450 (KFD69_23435) | 50858..51436 | - | 579 | WP_000085742.1 | hypothetical protein | - |
| KFD69_RS23455 (KFD69_23440) | 51433..52125 | - | 693 | WP_001038509.1 | Chaperone protein FaeE | VF |
| KFD69_RS23460 (KFD69_23445) | 52118..54526 | - | 2409 | WP_000007891.1 | Outer membrane usher protein FimD | VF |
| KFD69_RS23465 (KFD69_23450) | 54753..55277 | - | 525 | WP_000748204.1 | hypothetical protein | VF |
| KFD69_RS23470 (KFD69_23455) | 55552..55854 | - | 303 | WP_000979451.1 | Major pilu subunit operon regulatory protein PapB | VF |
| KFD69_RS23475 (KFD69_23460) | 55883..56194 | + | 312 | WP_015059605.1 | hypothetical protein | - |
| KFD69_RS23480 (KFD69_23465) | 56561..56947 | + | 387 | WP_000751876.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| KFD69_RS23485 (KFD69_23470) | 57000..57119 | + | 120 | Protein_70 | recombinase | - |
| KFD69_RS23490 (KFD69_23475) | 57488..58477 | - | 990 | WP_000461382.1 | RepB family plasmid replication initiator protein | - |
| KFD69_RS23495 (KFD69_23480) | 58971..59266 | - | 296 | Protein_72 | cytoplasmic protein | - |
| KFD69_RS23500 (KFD69_23485) | 59278..59706 | + | 429 | Protein_73 | hypothetical protein | - |
| KFD69_RS23505 (KFD69_23490) | 59750..60271 | - | 522 | WP_077681952.1 | hypothetical protein | - |
| KFD69_RS23510 (KFD69_23495) | 60947..61165 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KFD69_RS23515 (KFD69_23500) | 61167..61472 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KFD69_RS23520 (KFD69_23505) | 61474..61764 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| KFD69_RS23525 (KFD69_23510) | 61761..62282 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| KFD69_RS23530 (KFD69_23515) | 62317..63099 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| KFD69_RS23535 (KFD69_23520) | 63108..63821 | + | 714 | WP_000545756.1 | Cyclic di-GMP phosphodiesterase PdeL | VF |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|