MGE detailed information
MGE type: Prophage MGE length: 75484 bp
Accession: NZ_CP074407 Location: 3634389..3709872 Organism: Escherichia coli strain GDAR2-2 Replicon: chromosome
Accession: NZ_CP074407 Location: 3634389..3709872 Organism: Escherichia coli strain GDAR2-2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KHW16_RS17570 (3630638) | 3630638..3633064 | - | 2427 | WP_000041554.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KHW16_RS17575 (3633263) | 3633263..3633568 | - | 306 | WP_001307224.1 | DUF1161 domain-containing protein | - |
| KHW16_RS17580 (3633676) | 3633676..3634386 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KHW16_RS17585 (3634389) | 3634389..3634949 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KHW16_RS17590 (3634984) | 3634984..3635325 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KHW16_RS17595 (3635460) | 3635460..3635786 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KHW16_RS17600 (3635992) | 3635992..3637206 | + | 1215 | WP_063120133.1 | starvation-sensing protein RspA | - |
| KHW16_RS17605 (3637218) | 3637218..3638237 | + | 1020 | WP_000836058.1 | Zn-dependent oxidoreductase | - |
| KHW16_RS17610 (3638425) | 3638425..3639705 | - | 1281 | WP_123000926.1 | hypothetical protein ; Integrase | Integrase |
| KHW16_RS17615 (3639740) | 3639740..3639991 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KHW16_RS17620 (3640064) | 3640064..3642535 | - | 2472 | WP_087889626.1 | exonuclease | - |
| KHW16_RS17625 (3642628) | 3642628..3642819 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KHW16_RS17630 (3642816) | 3642816..3643004 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KHW16_RS17635 (3643572) | 3643572..3643790 | - | 219 | WP_001171942.1 | protein YdfC | - |
| KHW16_RS24320 (3643820) | 3643820..3643948 | - | 129 | WP_000344964.1 | protein YdfB | - |
| KHW16_RS17640 (3643950) | 3643950..3644105 | - | 156 | WP_032154077.1 | DUF1391 family protein | - |
| KHW16_RS17645 (3644272) | 3644272..3644679 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| KHW16_RS17650 (3644763) | 3644763..3644993 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KHW16_RS17655 (3644977) | 3644977..3645498 | + | 522 | WP_087889627.1 | toxin YdaT family protein | - |
| KHW16_RS17660 (3645479) | 3645479..3646444 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| KHW16_RS17665 (3646485) | 3646485..3646907 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KHW16_RS17670 (3646904) | 3646904..3647393 | + | 490 | Protein_3447 | class I SAM-dependent methyltransferase | - |
| KHW16_RS17675 (3647871) | 3647871..3648292 | + | 422 | Protein_3448 | hypothetical protein | - |
| KHW16_RS17680 (3648948) | 3648948..3649970 | + | 1023 | Protein_3449 | ISNCY family transposase ISCARN112 | Transposase |
| KHW16_RS17685 (3650091) | 3650091..3650240 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KHW16_RS17690 (3650677) | 3650677..3651009 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KHW16_RS17695 (3651212) | 3651212..3651517 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KHW16_RS17700 (3651542) | 3651542..3651781 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KHW16_RS17705 (3651781) | 3651781..3652068 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KHW16_RS17710 (3652140) | 3652140..3652295 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KHW16_RS17715 (3652512) | 3652512..3652763 | + | 252 | WP_000980994.1 | protein Rem | - |
| KHW16_RS17720 (3652830) | 3652830..3653108 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KHW16_RS17725 (3653110) | 3653110..3654159 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KHW16_RS17730 (3654173) | 3654173..3654925 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KHW16_RS17735 (3655203) | 3655203..3655292 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KHW16_RS17740 (3655347) | 3655347..3655559 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KHW16_RS17745 (3655860) | 3655860..3656075 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KHW16_RS17750 (3656439) | 3656439..3656609 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KHW16_RS17755 (3656829) | 3656829..3657044 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KHW16_RS17760 (3657049) | 3657049..3657360 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KHW16_RS17765 (3657357) | 3657357..3657890 | + | 534 | WP_001092971.1 | lysozyme | - |
| KHW16_RS17770 (3657887) | 3657887..3658384 | + | 498 | WP_238557796.1 | DUF2514 domain-containing protein | - |
| KHW16_RS17775 (3658747) | 3658747..3658959 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KHW16_RS17780 (3658970) | 3658970..3659158 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KHW16_RS17785 (3659161) | 3659161..3659226 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KHW16_RS17790 (3659231) | 3659231..3659461 | + | 231 | WP_000720962.1 | protein YnfN | - |
| KHW16_RS17795 (3659633) | 3659633..3659806 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KHW16_RS17800 (3659958) | 3659958..3660368 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KHW16_RS17805 (3660426) | 3660426..3660659 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KHW16_RS17810 (3661048) | 3661048..3661593 | + | 546 | WP_000453587.1 | DNA-packaging protein | - |
| KHW16_RS17815 (3661568) | 3661568..3663493 | + | 1926 | WP_001027269.1 | phage terminase large subunit family protein | - |
| KHW16_RS17820 (3663490) | 3663490..3663696 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KHW16_RS17825 (3663693) | 3663693..3665294 | + | 1602 | WP_087889866.1 | phage portal protein | - |
| KHW16_RS17830 (3665275) | 3665275..3666606 | + | 1332 | WP_001530246.1 | S49 family peptidase | - |
| KHW16_RS17835 (3666616) | 3666616..3666948 | + | 333 | WP_000201478.1 | head decoration protein | - |
| KHW16_RS17840 (3667004) | 3667004..3668029 | + | 1026 | WP_000118191.1 | major capsid protein | - |
| KHW16_RS17845 (3668071) | 3668071..3668469 | + | 399 | WP_000158862.1 | DNA-packaging protein FI | - |
| KHW16_RS17850 (3668481) | 3668481..3668834 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| KHW16_RS17855 (3668846) | 3668846..3669424 | + | 579 | WP_000975068.1 | phage tail protein | - |
| KHW16_RS17860 (3669421) | 3669421..3669816 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| KHW16_RS17865 (3669824) | 3669824..3670564 | + | 741 | WP_044502411.1 | phage tail protein | - |
| KHW16_RS17870 (3670580) | 3670580..3671002 | + | 423 | WP_087889867.1 | phage minor tail protein G | - |
| KHW16_RS17875 (3670984) | 3670984..3671418 | + | 435 | WP_021512138.1 | phage tail assembly protein T | - |
| KHW16_RS17880 (3671411) | 3671411..3673972 | + | 2562 | WP_087889868.1 | phage tail tape measure protein | - |
| KHW16_RS17885 (3673969) | 3673969..3674298 | + | 330 | WP_000847351.1 | phage tail protein | - |
| KHW16_RS17890 (3674298) | 3674298..3674996 | + | 699 | WP_001152612.1 | phage minor tail protein L | - |
| KHW16_RS17895 (3675002) | 3675002..3675745 | + | 744 | WP_001484131.1 | C40 family peptidase | - |
| KHW16_RS17900 (3675682) | 3675682..3676284 | + | 603 | WP_000090849.1 | tail assembly protein | - |
| KHW16_RS17905 (3676345) | 3676345..3679740 | + | 3396 | WP_114499237.1 | host specificity protein J | - |
| KHW16_RS17910 (3679808) | 3679808..3680407 | + | 600 | WP_001233167.1 | hypothetical protein | VF |
| KHW16_RS17915 (3680472) | 3680472..3683543 | + | 3072 | WP_097434386.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KHW16_RS17920 (3683543) | 3683543..3684118 | + | 576 | WP_000885616.1 | tail fiber assembly protein | - |
| KHW16_RS17925 (3684216) | 3684216..3684806 | - | 591 | WP_000086514.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KHW16_RS17930 (3685123) | 3685123..3685356 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KHW16_RS17935 (3685425) | 3685425..3685538 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KHW16_RS17940 (3686141) | 3686141..3687424 | + | 1284 | Protein_3501 | MHS family MFS transporter YdfJ | - |
| KHW16_RS17945 (3687513) | 3687513..3688973 | + | 1461 | Protein_3502 | mannitol dehydrogenase family protein | - |
| KHW16_RS17950 (3689009) | 3689009..3689212 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KHW16_RS17955 (3689390) | 3689390..3690076 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KHW16_RS17960 (3690165) | 3690165..3690911 | - | 747 | WP_000636571.1 | hypothetical protein | VF |
| KHW16_RS17965 (3691048) | 3691048..3693093 | + | 2046 | WP_001296767.1 | peptidyl-dipeptidase Dcp | - |
| KHW16_RS17970 (3693138) | 3693138..3693656 | - | 519 | WP_001024561.1 | 2-oxo-tetronate isomerase | - |
| KHW16_RS17975 (3693932) | 3693932..3694324 | + | 393 | WP_000671731.1 | YdeI family stress tolerance OB fold protein | - |
| KHW16_RS17980 (3694579) | 3694579..3695469 | + | 891 | WP_096985112.1 | diguanylate cyclase DgcZ | - |
| KHW16_RS17985 (3695584) | 3695584..3695688 | - | 105 | WP_211180496.1 | protein MgtT | - |
| KHW16_RS17990 (3695688) | 3695688..3695783 | - | 96 | WP_000901367.1 | protein MgtS | - |
| KHW16_RS17995 (3695910) | 3695910..3697097 | - | 1188 | WP_024243274.1 | efflux MFS transporter YdeE | - |
| KHW16_RS18000 (3697292) | 3697292..3698191 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| KHW16_RS18005 (3698236) | 3698236..3698934 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
| KHW16_RS18010 (3699133) | 3699133..3699444 | + | 312 | WP_000722571.1 | PTS sugar transporter subunit IIB | - |
| KHW16_RS18015 (3699559) | 3699559..3700881 | + | 1323 | WP_000523802.1 | PTS sugar transporter subunit IIC | - |
| KHW16_RS18020 (3700909) | 3700909..3701220 | + | 312 | WP_001296721.1 | PTS lactose/cellobiose transporter subunit IIA | - |
| KHW16_RS18025 (3701276) | 3701276..3702949 | + | 1674 | WP_001022772.1 | carbohydrate porin | - |
| KHW16_RS18030 (3702974) | 3702974..3704413 | + | 1440 | WP_063120135.1 | 6-phospho-beta-glucosidase | - |
| KHW16_RS18035 (3704470) | 3704470..3704688 | - | 219 | WP_000803659.1 | multiple antibiotic resistance protein MarB | - |
| KHW16_RS18040 (3704720) | 3704720..3705103 | - | 384 | WP_000091199.1 | hypothetical protein | VF |
| KHW16_RS18045 (3705123) | 3705123..3705557 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| KHW16_RS18050 (3705769) | 3705769..3706434 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| KHW16_RS18055 (3706459) | 3706459..3707649 | - | 1191 | WP_063120136.1 | L-arabinose MFS transporter | - |
| KHW16_RS18060 (3707799) | 3707799..3708913 | - | 1115 | Protein_3525 | putative protein YneK | - |
| KHW16_RS18065 (3708991) | 3708991..3709872 | - | 882 | WP_000366496.1 | hypothetical protein | VF |
| KHW16_RS18070 (3709973) | 3709973..3711361 | + | 1389 | WP_001296740.1 | succinate-semialdehyde dehydrogenase | - |
| KHW16_RS18075 (3711425) | 3711425..3712351 | + | 927 | WP_000257409.1 | glutaminase B | - |
| KHW16_RS18080 (3712351) | 3712351..3712710 | + | 360 | WP_001191027.1 | DUF4186 domain-containing protein | - |
| KHW16_RS18085 (3712849) | 3712849..3714267 | + | 1419 | WP_000558050.1 | diguanylate cyclase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|