MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 111136 bp
Accession: NZ_CP074379 Location: 2598256..2709391 Organism: Lacticaseibacillus zeae strain FBL8 Replicon: chromosome
Accession: NZ_CP074379 Location: 2598256..2709391 Organism: Lacticaseibacillus zeae strain FBL8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KG087_RS12250 (KG087_12250) | 2593363..2593908 | - | 546 | WP_029345568.1 | hypoxanthine phosphoribosyltransferase | - |
| KG087_RS12255 (KG087_12255) | 2593908..2595215 | - | 1308 | WP_010491295.1 | tRNA lysidine(34) synthetase TilS | - |
| KG087_RS12260 (KG087_12260) | 2595319..2595804 | - | 486 | WP_010491293.1 | S1 domain-containing RNA-binding protein | - |
| KG087_RS12265 (KG087_12265) | 2596013..2596414 | - | 402 | WP_010491291.1 | septum formation initiator family protein | - |
| KG087_RS12270 (KG087_12270) | 2596507..2596770 | - | 264 | WP_010491289.1 | RNA-binding S4 domain-containing protein | - |
| KG087_RS12275 (KG087_12275) | 2596775..2598349 | - | 1575 | WP_010491287.1 | polysaccharide biosynthesis protein | - |
| KG087_RS12280 (KG087_12280) | 2598421..2601948 | - | 3528 | WP_075761422.1 | transcription-repair coupling factor | - |
| KG087_RS12285 (KG087_12285) | 2602022..2602579 | - | 558 | WP_010491283.1 | aminoacyl-tRNA hydrolase | - |
| KG087_RS12290 (KG087_12290) | 2603055..2604062 | + | 1008 | WP_003662706.1 | L-lactate dehydrogenase | - |
| KG087_RS12295 (KG087_12295) | 2604370..2605740 | + | 1371 | WP_075761421.1 | L,D-transpeptidase family protein | - |
| KG087_RS12300 (KG087_12300) | 2605955..2606620 | + | 666 | WP_010491258.1 | cyclic di-AMP binding protein CbpA | - |
| KG087_RS12305 (KG087_12305) | 2606943..2607641 | + | 699 | WP_010491256.1 | L,D-transpeptidase | - |
| KG087_RS12310 (KG087_12310) | 2607711..2608094 | - | 384 | WP_005686631.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| KG087_RS12315 (KG087_12315) | 2608114..2608362 | - | 249 | WP_010491246.1 | antitoxin | Antitoxin Detail |
| KG087_RS12320 (KG087_12320) | 2608461..2609600 | - | 1140 | WP_213449874.1 | alanine racemase | - |
| KG087_RS12325 (KG087_12325) | 2609587..2609961 | - | 375 | WP_010491243.1 | holo-ACP synthase | - |
| KG087_RS12330 (KG087_12330) | 2610199..2611707 | - | 1509 | WP_047107145.1 | DEAD/DEAH box helicase | - |
| KG087_RS12335 (KG087_12335) | 2612386..2613774 | - | 1389 | WP_010491238.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| KG087_RS12340 (KG087_12340) | 2614264..2615022 | - | 759 | WP_010491228.1 | hypothetical protein | - |
| KG087_RS12345 (KG087_12345) | 2615108..2615749 | + | 642 | WP_010491226.1 | SMI1/KNR4 family protein | - |
| KG087_RS12350 (KG087_12350) | 2615761..2616438 | - | 678 | WP_010491224.1 | hypothetical protein | - |
| KG087_RS12355 (KG087_12355) | 2616534..2616962 | + | 429 | WP_010491222.1 | hypothetical protein | - |
| KG087_RS14815 | 2617640..2618689 | + | 1050 | WP_029345566.1 | hypothetical protein | VF |
| KG087_RS14820 | 2618695..2619186 | + | 492 | WP_029345565.1 | hypothetical protein | VF |
| KG087_RS14825 | 2619204..2620271 | + | 1068 | WP_225358807.1 | SpaA isopeptide-forming pilin-related protein | - |
| KG087_RS14830 | 2620448..2621449 | + | 1002 | WP_249481769.1 | SpaA isopeptide-forming pilin-related protein | - |
| KG087_RS12365 (KG087_12365) | 2621451..2621693 | + | 243 | WP_010491217.1 | hypothetical protein | - |
| KG087_RS14835 | 2621872..2622057 | + | 186 | WP_249481743.1 | DUF961 family protein | - |
| KG087_RS12375 (KG087_12375) | 2622075..2622446 | + | 372 | WP_010491213.1 | YdcP family protein | - |
| KG087_RS12380 (KG087_12380) | 2622524..2622787 | + | 264 | WP_010491211.1 | hypothetical protein | - |
| KG087_RS12385 (KG087_12385) | 2622792..2623037 | + | 246 | WP_225047811.1 | hypothetical protein | - |
| KG087_RS12390 (KG087_12390) | 2623072..2623320 | + | 249 | WP_010491207.1 | hypothetical protein | - |
| KG087_RS12395 (KG087_12395) | 2623340..2623627 | + | 288 | WP_010491205.1 | hypothetical protein | - |
| KG087_RS12400 (KG087_12400) | 2623624..2624991 | + | 1368 | Protein_2415 | FtsK/SpoIIIE domain-containing protein | - |
| KG087_RS12405 (KG087_12405) | 2625002..2625277 | + | 276 | WP_010491202.1 | hypothetical protein | - |
| KG087_RS12410 (KG087_12410) | 2625274..2625534 | + | 261 | WP_010491200.1 | hypothetical protein | - |
| KG087_RS12415 (KG087_12415) | 2625850..2627040 | + | 1191 | WP_075761168.1 | XRE family transcriptional regulator | - |
| KG087_RS12420 (KG087_12420) | 2627021..2627356 | + | 336 | WP_225356157.1 | hypothetical protein | - |
| KG087_RS14840 | 2627487..2627936 | + | 450 | WP_249481744.1 | site-specific DNA-methyltransferase | - |
| KG087_RS14845 | 2628009..2628221 | + | 213 | Protein_2421 | DNA methyltransferase | - |
| KG087_RS12430 (KG087_12430) | 2628320..2628541 | + | 222 | WP_003606383.1 | hypothetical protein | - |
| KG087_RS12435 (KG087_12435) | 2628545..2629042 | + | 498 | WP_010491187.1 | antirestriction protein ArdA | - |
| KG087_RS12440 (KG087_12440) | 2629104..2629496 | + | 393 | WP_010491186.1 | conjugal transfer protein | - |
| KG087_RS12445 (KG087_12445) | 2629480..2631945 | + | 2466 | WP_075761167.1 | ATP-binding protein | - |
| KG087_RS12450 (KG087_12450) | 2631932..2634024 | + | 2093 | Protein_2426 | conjugal transfer protein | - |
| KG087_RS12455 (KG087_12455) | 2634021..2635016 | + | 996 | WP_010491182.1 | putative endopeptidase p60 | VF |
| KG087_RS14850 | 2635253..2635558 | + | 306 | WP_225358803.1 | hypothetical protein | - |
| KG087_RS12465 (KG087_12465) | 2635555..2636478 | + | 924 | WP_010491181.1 | conjugal transfer protein | - |
| KG087_RS12470 (KG087_12470) | 2636650..2637282 | - | 633 | Protein_2430 | IS30 family transposase ISApl1 | Transposase |
| KG087_RS12475 (KG087_12475) | 2637351..2638033 | + | 683 | WP_138118154.1 | IS6 family transposase | - |
| KG087_RS12480 (KG087_12480) | 2638385..2640955 | - | 2571 | WP_235500845.1 | family 15 glucoamylase | - |
| KG087_RS12485 (KG087_12485) | 2641214..2641981 | - | 768 | Protein_2433 | IS30 family transposase ISLpl1 | Transposase |
| KG087_RS12490 (KG087_12490) | 2642102..2642857 | - | 756 | WP_010493894.1 | IS3 family transposase ISBce13 | Transposase |
| KG087_RS12495 (KG087_12495) | 2642998..2643249 | - | 252 | WP_056945714.1 | IS3 family transposase IS153 | Transposase |
| KG087_RS12500 (KG087_12500) | 2643329..2644342 | + | 1014 | Protein_2436 | DNA topoisomerase | - |
| KG087_RS12505 (KG087_12505) | 2644464..2644679 | + | 216 | WP_004466187.1 | hypothetical protein | - |
| KG087_RS12510 (KG087_12510) | 2644928..2645878 | - | 951 | WP_010491161.1 | LacI family DNA-binding transcriptional regulator | - |
| KG087_RS12515 (KG087_12515) | 2646030..2647367 | + | 1338 | WP_010491159.1 | SLC45 family MFS transporter | - |
| KG087_RS12520 (KG087_12520) | 2647394..2649073 | + | 1680 | WP_010491158.1 | alpha-glucosidase | - |
| KG087_RS12525 (KG087_12525) | 2649171..2650100 | - | 930 | WP_010491156.1 | IS30 family transposase ISLpl1 | Transposase |
| KG087_RS12530 (KG087_12530) | 2650426..2650935 | + | 510 | WP_010491153.1 | hypothetical protein | - |
| KG087_RS12535 (KG087_12535) | 2651055..2651477 | + | 423 | WP_029345563.1 | hypothetical protein | - |
| KG087_RS12540 (KG087_12540) | 2651720..2651962 | + | 243 | WP_003582208.1 | protein-export chaperone SecB | - |
| KG087_RS12545 (KG087_12545) | 2652190..2653053 | + | 864 | WP_010491147.1 | PRD domain-containing protein | - |
| KG087_RS12550 (KG087_12550) | 2653043..2654908 | + | 1866 | WP_010491145.1 | PTS beta-glucoside transporter subunit IIBCA | - |
| KG087_RS12555 (KG087_12555) | 2654923..2656428 | + | 1506 | WP_010491142.1 | glycoside hydrolase family 1 protein | - |
| KG087_RS12565 (KG087_12565) | 2657703..2657984 | - | 282 | Protein_2449 | cation:dicarboxylase symporter family transporter | - |
| KG087_RS12570 (KG087_12570) | 2658252..2660264 | - | 2013 | WP_138118134.1 | PTS glucose transporter subunit IIABC | - |
| KG087_RS12575 (KG087_12575) | 2660278..2661930 | - | 1653 | WP_138118132.1 | alpha,alpha-phosphotrehalase | - |
| KG087_RS12580 (KG087_12580) | 2661982..2662698 | - | 717 | WP_010493359.1 | trehalose operon repressor | - |
| KG087_RS12585 (KG087_12585) | 2662896..2663123 | - | 228 | WP_032962002.1 | hypothetical protein | - |
| KG087_RS12590 (KG087_12590) | 2663260..2663943 | - | 684 | Protein_2454 | IS6 family transposase ISBth20 | Transposase |
| KG087_RS14855 | 2664018..2664521 | + | 504 | Protein_2455 | peptidoglycan-binding protein | - |
| KG087_RS12605 (KG087_12605) | 2664541..2665044 | + | 504 | WP_012537722.1 | hypothetical protein | - |
| KG087_RS12610 (KG087_12610) | 2665157..2665807 | + | 651 | WP_003601979.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| KG087_RS12615 (KG087_12615) | 2665813..2666097 | + | 285 | WP_002819966.1 | BRCT domain-containing protein | - |
| KG087_RS12620 (KG087_12620) | 2666127..2666315 | + | 189 | WP_010491042.1 | hypothetical protein | - |
| KG087_RS12625 (KG087_12625) | 2666405..2667076 | - | 672 | WP_075761311.1 | TetR/AcrR family transcriptional regulator | - |
| KG087_RS12630 (KG087_12630) | 2667081..2668298 | - | 1218 | WP_010009081.1 | ABC transporter permease | - |
| KG087_RS12635 (KG087_12635) | 2668276..2669019 | - | 744 | WP_010491036.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| KG087_RS12640 (KG087_12640) | 2669239..2669622 | - | 384 | Protein_2463 | pyridoxal-phosphate dependent enzyme | - |
| KG087_RS12645 (KG087_12645) | 2669651..2670438 | - | 788 | Protein_2464 | IS5 family transposase ISCaa8 | Transposase |
| KG087_RS12650 (KG087_12650) | 2670482..2670841 | + | 360 | Protein_2465 | IS3 family transposase | - |
| KG087_RS12655 (KG087_12655) | 2671259..2672173 | - | 915 | WP_010491024.1 | hypothetical protein | - |
| KG087_RS12660 (KG087_12660) | 2672308..2675475 | + | 3168 | WP_010491021.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KG087_RS12665 (KG087_12665) | 2675489..2677111 | + | 1623 | WP_010491020.1 | type I restriction-modification system subunit M | - |
| KG087_RS12670 (KG087_12670) | 2677101..2678282 | + | 1182 | WP_010491017.1 | restriction endonuclease subunit S | - |
| KG087_RS12680 (KG087_12680) | 2678748..2679836 | - | 1089 | WP_010491015.1 | hypothetical protein | - |
| KG087_RS12685 (KG087_12685) | 2679840..2680055 | - | 216 | WP_010491013.1 | hypothetical protein | - |
| KG087_RS12690 (KG087_12690) | 2680178..2682313 | - | 2136 | Protein_2472 | DNA topoisomerase III | - |
| KG087_RS12695 (KG087_12695) | 2682320..2682730 | - | 411 | WP_010491011.1 | hypothetical protein | - |
| KG087_RS12700 (KG087_12700) | 2682745..2683080 | - | 336 | Protein_2474 | conjugal transfer protein | - |
| KG087_RS12705 (KG087_12705) | 2683204..2683962 | - | 759 | Protein_2475 | IS3 family transposase ISBce13 | Transposase |
| KG087_RS12710 (KG087_12710) | 2684100..2684351 | - | 252 | WP_075760722.1 | IS3 family transposase IS153 | Transposase |
| KG087_RS12715 (KG087_12715) | 2684435..2684680 | + | 246 | Protein_2477 | IS5 family transposase ISLca2 | Transposase |
| KG087_RS12720 (KG087_12720) | 2684689..2685198 | + | 510 | Protein_2478 | IS6 family transposase ISBth20 | Transposase |
| KG087_RS12725 (KG087_12725) | 2685271..2685954 | + | 684 | WP_010490996.1 | IS6 family transposase ISBth20 | Transposase |
| KG087_RS12730 (KG087_12730) | 2686282..2686680 | + | 399 | WP_075761415.1 | sigma-70 family RNA polymerase sigma factor | - |
| KG087_RS12735 (KG087_12735) | 2686701..2686958 | + | 258 | WP_019899265.1 | helix-turn-helix domain-containing protein | - |
| KG087_RS12740 (KG087_12740) | 2687308..2687580 | + | 273 | WP_010490992.1 | helix-turn-helix domain-containing protein | - |
| KG087_RS12745 (KG087_12745) | 2687632..2688894 | + | 1263 | WP_010490990.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KG087_RS12750 (KG087_12750) | 2689025..2689276 | - | 252 | WP_010490989.1 | type B 50S ribosomal protein L31 | - |
| KG087_RS12755 (KG087_12755) | 2689373..2690632 | - | 1260 | WP_010490988.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| KG087_RS12760 (KG087_12760) | 2691186..2692790 | - | 1605 | WP_010490987.1 | CTP synthase | - |
| KG087_RS12765 (KG087_12765) | 2692967..2694148 | - | 1182 | WP_010490986.1 | RNA-guided endonuclease TnpB family protein | - |
| KG087_RS12770 (KG087_12770) | 2694626..2695309 | - | 684 | WP_029345562.1 | DNA-directed RNA polymerase subunit delta | - |
| KG087_RS12775 (KG087_12775) | 2695352..2695798 | - | 447 | WP_010490984.1 | DUF1934 domain-containing protein | - |
| KG087_RS12780 (KG087_12780) | 2695941..2696765 | + | 825 | WP_010490978.1 | lipoate--protein ligase A | - |
| KG087_RS12785 (KG087_12785) | 2696894..2698246 | + | 1353 | WP_010490976.1 | HD domain-containing protein | - |
| KG087_RS12790 (KG087_12790) | 2698258..2698710 | - | 453 | WP_010490975.1 | NUDIX hydrolase | - |
| KG087_RS12795 (KG087_12795) | 2698782..2699831 | + | 1050 | WP_010490974.1 | YdcF family protein | - |
| KG087_RS12800 (KG087_12800) | 2699923..2700303 | + | 381 | WP_010490973.1 | large-conductance mechanosensitive channel protein MscL | - |
| KG087_RS12805 (KG087_12805) | 2700415..2700840 | - | 426 | WP_075761357.1 | hypothetical protein | - |
| KG087_RS12810 (KG087_12810) | 2700926..2701255 | - | 330 | WP_010490971.1 | ASCH domain-containing protein | - |
| KG087_RS12815 (KG087_12815) | 2701354..2702532 | - | 1179 | WP_010490970.1 | amidohydrolase family protein | - |
| KG087_RS12820 (KG087_12820) | 2702578..2703927 | - | 1350 | WP_010490969.1 | M20/M25/M40 family metallo-hydrolase | - |
| KG087_RS12825 (KG087_12825) | 2704177..2705367 | + | 1191 | WP_010490968.1 | hypothetical protein | - |
| KG087_RS12830 (KG087_12830) | 2705540..2706514 | - | 975 | WP_003567718.1 | ribose-phosphate diphosphokinase | - |
| KG087_RS12835 (KG087_12835) | 2706612..2708000 | - | 1389 | WP_010490965.1 | Bifunctional protein GlmU | VF |
| KG087_RS12840 (KG087_12840) | 2708426..2709598 | - | 1173 | WP_075761358.1 | VanZ family protein | - |
| KG087_RS12845 (KG087_12845) | 2709595..2710443 | - | 849 | WP_010490963.1 | pur operon repressor | - |
| KG087_RS12850 (KG087_12850) | 2710664..2711314 | + | 651 | WP_010490962.1 | ATP-binding cassette domain-containing protein | - |
| KG087_RS12855 (KG087_12855) | 2711311..2712072 | + | 762 | WP_010490961.1 | iron export ABC transporter permease subunit FetB | - |
| KG087_RS12860 (KG087_12860) | 2712172..2713050 | - | 879 | WP_070651496.1 | cation diffusion facilitator family transporter | - |
| KG087_RS12865 (KG087_12865) | 2713102..2713980 | - | 879 | WP_047107122.1 | 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|