MGE detailed information
MGE type: Prophage MGE length: 41518 bp
Accession: NZ_CP074366 Location: 2306941..2348458 Organism: Escherichia coli strain ZYB62 Replicon: chromosome
Accession: NZ_CP074366 Location: 2306941..2348458 Organism: Escherichia coli strain ZYB62 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KG092_RS11110 (2302840) | 2302840..2304060 | + | 1221 | WP_000225276.1 | DNA-binding transcriptional repressor Mlc | - |
| KG092_RS11115 (2304185) | 2304185..2304880 | + | 696 | WP_000919226.1 | dethiobiotin synthase | - |
| KG092_RS11120 (2304833) | 2304833..2306125 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KG092_RS11125 (2306284) | 2306284..2306898 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| KG092_RS11130 (2306941) | 2306941..2307795 | - | 855 | WP_000526492.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KG092_RS11135 (2307797) | 2307797..2308414 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KG092_RS11140 (2308425) | 2308425..2310848 | - | 2424 | WP_001340362.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KG092_RS11145 (2310909) | 2310909..2313335 | - | 2427 | WP_047631323.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KG092_RS11150 (2313534) | 2313534..2313839 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KG092_RS11155 (2313947) | 2313947..2314657 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KG092_RS11160 (2314660) | 2314660..2315220 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KG092_RS11165 (2315255) | 2315255..2315596 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KG092_RS11170 (2315731) | 2315731..2316057 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KG092_RS11175 (2316263) | 2316263..2317477 | + | 1215 | WP_097412174.1 | starvation-sensing protein RspA | - |
| KG092_RS11180 (2317489) | 2317489..2318508 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| KG092_RS11185 (2318696) | 2318696..2319976 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KG092_RS11190 (2320011) | 2320011..2320262 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KG092_RS11195 (2320335) | 2320335..2322806 | - | 2472 | WP_000048327.1 | exonuclease | - |
| KG092_RS11200 (2322899) | 2322899..2323090 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KG092_RS11205 (2323087) | 2323087..2323275 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KG092_RS11210 (2323359) | 2323359..2323448 | + | 90 | Protein_2189 | hypothetical protein | - |
| KG092_RS11215 (2323885) | 2323885..2324217 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KG092_RS11220 (2324420) | 2324420..2324725 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KG092_RS11225 (2324750) | 2324750..2324989 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KG092_RS11230 (2324989) | 2324989..2325276 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KG092_RS11235 (2325348) | 2325348..2325503 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KG092_RS11240 (2325720) | 2325720..2325971 | + | 252 | WP_000980994.1 | protein Rem | - |
| KG092_RS11245 (2326038) | 2326038..2326316 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KG092_RS11250 (2326318) | 2326318..2327367 | + | 1050 | WP_001439074.1 | DUF968 domain-containing protein | - |
| KG092_RS11255 (2327381) | 2327381..2328133 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KG092_RS11260 (2328411) | 2328411..2328500 | - | 90 | WP_122985911.1 | hypothetical protein | - |
| KG092_RS11265 (2328555) | 2328555..2328767 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| KG092_RS11270 (2329066) | 2329066..2329281 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| KG092_RS11275 (2329645) | 2329645..2329815 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| KG092_RS11280 (2330034) | 2330034..2330249 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KG092_RS11285 (2330254) | 2330254..2330565 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KG092_RS11290 (2330562) | 2330562..2331095 | + | 534 | WP_001092971.1 | lysozyme | - |
| KG092_RS11295 (2331092) | 2331092..2331589 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KG092_RS11300 (2331952) | 2331952..2332164 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KG092_RS11305 (2332175) | 2332175..2332363 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KG092_RS11310 (2332366) | 2332366..2332431 | + | 66 | WP_122985912.1 | small protein YnfR | - |
| KG092_RS11315 (2332436) | 2332436..2332666 | + | 231 | WP_000720962.1 | protein YnfN | - |
| KG092_RS11320 (2332838) | 2332838..2333011 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KG092_RS11325 (2333163) | 2333163..2333573 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KG092_RS11330 (2333631) | 2333631..2333864 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KG092_RS11335 (2334253) | 2334253..2334657 | + | 405 | Protein_2214 | DNA-packaging protein | - |
| KG092_RS11340 (2334645) | 2334645..2335541 | + | 897 | Protein_2215 | host specificity protein J | - |
| KG092_RS11345 (2335543) | 2335543..2336415 | + | 873 | Protein_2216 | phage tail protein | - |
| KG092_RS11350 (2336415) | 2336415..2336990 | + | 576 | WP_001439069.1 | tail fiber assembly protein | - |
| KG092_RS11355 (2337113) | 2337113..2338275 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| KG092_RS11360 (2338349) | 2338349..2338939 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KG092_RS11365 (2339256) | 2339256..2339489 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KG092_RS11370 (2339558) | 2339558..2339671 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KG092_RS11375 (2340275) | 2340275..2341558 | + | 1284 | Protein_2222 | MHS family MFS transporter YdfJ | - |
| KG092_RS11380 (2341647) | 2341647..2343107 | + | 1461 | WP_047631000.1 | mannitol dehydrogenase family protein | - |
| KG092_RS11385 (2343143) | 2343143..2343346 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KG092_RS11390 (2343524) | 2343524..2344210 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KG092_RS11395 (2344299) | 2344299..2345045 | - | 747 | WP_000636575.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| KG092_RS11400 (2345182) | 2345182..2347227 | + | 2046 | WP_001315525.1 | peptidyl-dipeptidase Dcp | - |
| KG092_RS11405 (2347272) | 2347272..2347790 | - | 519 | WP_001024810.1 | 2-oxo-tetronate isomerase | - |
| KG092_RS11410 (2348066) | 2348066..2348458 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
| KG092_RS11415 (2348713) | 2348713..2349603 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| KG092_RS11420 (2349718) | 2349718..2349822 | - | 105 | WP_211180496.1 | protein MgtT | - |
| KG092_RS11425 (2349822) | 2349822..2349917 | - | 96 | WP_000901367.1 | protein MgtS | - |
| KG092_RS11430 (2350044) | 2350044..2351231 | - | 1188 | WP_001054217.1 | efflux MFS transporter YdeE | - |
| KG092_RS11435 (2351426) | 2351426..2352325 | + | 900 | WP_000087216.1 | O-acetylserine/cysteine exporter | - |
| KG092_RS11440 (2352370) | 2352370..2353068 | - | 699 | WP_000577184.1 | GntR family transcriptional regulator | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|