MGE detailed information
MGE type: Prophage MGE length: 38120 bp
Accession: NZ_CP074352 Location: 2377346..2415465 Organism: Siccibacter colletis strain YSD YN2 Replicon: chromosome
Accession: NZ_CP074352 Location: 2377346..2415465 Organism: Siccibacter colletis strain YSD YN2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFZ77_RS11470 | 2373851..2374090 | - | 240 | WP_264384254.1 | hypothetical protein | - |
| KFZ77_RS11475 (KFZ77_11455) | 2374830..2375255 | + | 426 | WP_264384255.1 | hypothetical protein | - |
| KFZ77_RS11480 (KFZ77_11460) | 2375262..2376098 | + | 837 | WP_264384256.1 | hypothetical protein | - |
| KFZ77_RS11485 (KFZ77_11465) | 2376082..2376384 | + | 303 | WP_264384257.1 | hypothetical protein | - |
| KFZ77_RS11490 (KFZ77_11470) | 2376893..2377117 | - | 225 | WP_264384258.1 | tail fiber assembly protein | - |
| KFZ77_RS11495 (KFZ77_11475) | 2377110..2377346 | - | 237 | WP_264384259.1 | hypothetical protein | - |
| KFZ77_RS11500 (KFZ77_11480) | 2377346..2377828 | - | 483 | WP_264384260.1 | phage tail protein | - |
| KFZ77_RS11505 (KFZ77_11485) | 2377848..2378033 | - | 186 | WP_264384261.1 | hypothetical protein | - |
| KFZ77_RS11510 (KFZ77_11490) | 2378021..2378287 | - | 267 | Protein_2256 | C40 family peptidase | - |
| KFZ77_RS11515 (KFZ77_11500) | 2379124..2379459 | - | 336 | Protein_2257 | terminase small subunit | - |
| KFZ77_RS11520 (KFZ77_11505) | 2379505..2379945 | + | 441 | WP_264384262.1 | hypothetical protein | - |
| KFZ77_RS11525 | 2380327..2380503 | - | 177 | Protein_2259 | hypothetical protein | - |
| KFZ77_RS11530 (KFZ77_11515) | 2380818..2381267 | - | 450 | WP_264384263.1 | hypothetical protein | - |
| KFZ77_RS11535 (KFZ77_11520) | 2381955..2382224 | + | 270 | WP_264384264.1 | hypothetical protein | - |
| KFZ77_RS11540 (KFZ77_11525) | 2383063..2383527 | - | 465 | WP_264386183.1 | lysis protein | - |
| KFZ77_RS11545 (KFZ77_11530) | 2383527..2384039 | - | 513 | WP_264384265.1 | lysozyme | - |
| KFZ77_RS11550 (KFZ77_11535) | 2384039..2384254 | - | 216 | WP_264384266.1 | class II holin family protein | - |
| KFZ77_RS11555 (KFZ77_11540) | 2384620..2385402 | - | 783 | WP_264384267.1 | antitermination protein | - |
| KFZ77_RS11560 (KFZ77_11545) | 2385399..2385539 | - | 141 | WP_264384268.1 | YlcG family protein | - |
| KFZ77_RS11565 (KFZ77_11550) | 2385536..2385898 | - | 363 | WP_264384269.1 | crossover junction endodeoxyribonuclease RusA | - |
| KFZ77_RS11570 (KFZ77_11555) | 2385895..2386185 | - | 291 | WP_264384270.1 | DUF1364 domain-containing protein | - |
| KFZ77_RS11575 (KFZ77_11560) | 2386188..2386394 | - | 207 | WP_035890989.1 | hypothetical protein | - |
| KFZ77_RS11580 (KFZ77_11565) | 2386394..2386990 | - | 597 | WP_264384271.1 | DUF1367 family protein | - |
| KFZ77_RS11585 | 2387030..2387251 | - | 222 | WP_264386184.1 | hypothetical protein | - |
| KFZ77_RS11590 (KFZ77_11570) | 2387378..2387611 | - | 234 | WP_264384272.1 | DinI family protein | - |
| KFZ77_RS11595 (KFZ77_11575) | 2388533..2388820 | - | 288 | WP_264384273.1 | hypothetical protein | - |
| KFZ77_RS11600 (KFZ77_11580) | 2389055..2390071 | + | 1017 | WP_264384274.1 | hypothetical protein | - |
| KFZ77_RS11605 (KFZ77_11585) | 2390378..2392957 | + | 2580 | WP_264384275.1 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| KFZ77_RS11610 (KFZ77_11590) | 2392914..2394246 | + | 1333 | Protein_2276 | hypothetical protein ; Integrase | Integrase |
| - | 2394321..2394462 | + | 142 | - | - | Antitoxin Detail |
| - | 2394324..2394426 | - | 103 | - | - | Toxin Detail |
| KFZ77_RS11615 (KFZ77_11600) | 2394560..2394904 | - | 345 | WP_031521244.1 | YebY family protein | - |
| KFZ77_RS11620 (KFZ77_11605) | 2394932..2395798 | - | 867 | WP_264384276.1 | copper homeostasis membrane protein CopD | - |
| KFZ77_RS11625 (KFZ77_11610) | 2395798..2396172 | - | 375 | WP_264384277.1 | CopC domain-containing protein YobA | - |
| KFZ77_RS11630 (KFZ77_11615) | 2396299..2396529 | + | 231 | WP_264384278.1 | DNA polymerase III subunit theta | - |
| KFZ77_RS11635 (KFZ77_11620) | 2396589..2397251 | + | 663 | WP_264384279.1 | exodeoxyribonuclease X | - |
| KFZ77_RS11640 (KFZ77_11625) | 2397252..2399312 | - | 2061 | WP_264384280.1 | oligopeptidase B | - |
| KFZ77_RS11645 (KFZ77_11630) | 2399399..2400061 | - | 663 | WP_264384281.1 | tellurite resistance TerB family protein | - |
| KFZ77_RS11650 (KFZ77_11635) | 2400228..2400572 | - | 345 | WP_264384282.1 | protein YebF | - |
| KFZ77_RS11655 (KFZ77_11640) | 2400645..2400974 | - | 330 | WP_264384283.1 | YebG family protein | - |
| KFZ77_RS11660 (KFZ77_11645) | 2401111..2402289 | + | 1179 | WP_264384284.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| KFZ77_RS11665 (KFZ77_11650) | 2402357..2402998 | - | 642 | WP_031521227.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KFZ77_RS11670 (KFZ77_11655) | 2403062..2404876 | - | 1815 | WP_264384285.1 | phosphogluconate dehydratase | - |
| KFZ77_RS11675 (KFZ77_11660) | 2405105..2406580 | - | 1476 | WP_264384286.1 | glucose-6-phosphate dehydrogenase | - |
| KFZ77_RS11680 (KFZ77_11665) | 2406938..2407807 | + | 870 | WP_031521222.1 | MurR/RpiR family transcriptional regulator | - |
| KFZ77_RS11685 (KFZ77_11670) | 2407938..2409380 | + | 1443 | WP_264384287.1 | pyruvate kinase | - |
| KFZ77_RS11690 (KFZ77_11675) | 2409424..2410401 | - | 978 | WP_264384288.1 | Lipid A biosynthesis myristoyltransferase | VF |
| KFZ77_RS11695 (KFZ77_11680) | 2410531..2411850 | - | 1320 | WP_264384289.1 | murein DD-endopeptidase MepM | - |
| KFZ77_RS11700 (KFZ77_11685) | 2411866..2412798 | - | 933 | WP_072001995.1 | zinc ABC transporter substrate-binding protein ZnuA | - |
| KFZ77_RS11705 (KFZ77_11690) | 2412877..2413632 | + | 756 | WP_031521213.1 | zinc ABC transporter ATP-binding protein ZnuC | - |
| KFZ77_RS11710 (KFZ77_11695) | 2413629..2414414 | + | 786 | WP_264384290.1 | High-affinity zinc uptake system membrane protein ZnuB | VF |
| KFZ77_RS11715 (KFZ77_11700) | 2414455..2415465 | - | 1011 | WP_031521211.1 | Holliday junction branch migration DNA helicase RuvB | - |
| KFZ77_RS11720 (KFZ77_11705) | 2415474..2416085 | - | 612 | WP_031521210.1 | Holliday junction branch migration protein RuvA | - |
| KFZ77_RS11725 (KFZ77_11710) | 2416162..2416683 | - | 522 | WP_031521209.1 | crossover junction endodeoxyribonuclease RuvC | - |
| KFZ77_RS11730 (KFZ77_11715) | 2416721..2417461 | - | 741 | WP_031521208.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| KFZ77_RS11735 (KFZ77_11720) | 2417489..2417932 | - | 444 | WP_264384291.1 | dihydroneopterin triphosphate diphosphatase | - |
| KFZ77_RS11740 (KFZ77_11725) | 2417934..2419712 | - | 1779 | WP_264384292.1 | aspartate--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|