MGE detailed information
MGE type: Genomic_island MGE length: 42956 bp
Accession: NZ_CP074233 Location: 3384193..3427148 Organism: Salmonella bongori CFSAN000510 strain SGSC 3100 Replicon: chromosome
Accession: NZ_CP074233 Location: 3384193..3427148 Organism: Salmonella bongori CFSAN000510 strain SGSC 3100 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JYN33_RS16050 (3379226) | 3379226..3382402 | + | 3177 | WP_000673165.1 | multidrug efflux RND transporter permease subunit MdsB | - |
| JYN33_RS16055 (3382419) | 3382419..3383876 | + | 1458 | WP_000691230.1 | efflux transporter outer membrane subunit | - |
| JYN33_RS16060 (3384193) | 3384193..3384537 | - | 345 | WP_000651477.1 | hypothetical protein | - |
| JYN33_RS16065 (3384716) | 3384716..3385423 | - | 708 | WP_141024918.1 | hypothetical protein | - |
| JYN33_RS16070 (3385410) | 3385410..3385892 | - | 483 | WP_001015732.1 | CaiF/GrlA family transcriptional regulator | - |
| JYN33_RS16075 (3385971) | 3385971..3386405 | - | 435 | WP_001286315.1 | hypothetical protein | - |
| JYN33_RS16080 (3386918) | 3386918..3387508 | + | 591 | WP_000646707.1 | fimbrial protein | - |
| JYN33_RS16085 (3387593) | 3387593..3390058 | + | 2466 | WP_024134949.1 | hypothetical protein | VF |
| JYN33_RS16090 (3390182) | 3390182..3390805 | + | 624 | WP_020842754.1 | hypothetical protein | VF |
| JYN33_RS16095 (3390838) | 3390838..3391794 | + | 957 | WP_000621807.1 | fimbrial protein | - |
| JYN33_RS16100 (3392611) | 3392611..3393432 | - | 822 | WP_013991373.1 | hypothetical protein | VF |
| JYN33_RS16105 (3393445) | 3393445..3394473 | - | 1029 | WP_013991372.1 | hypothetical protein | VF |
| JYN33_RS16110 (3394457) | 3394457..3395791 | - | 1335 | WP_024134948.1 | hypothetical protein | VF |
| JYN33_RS16115 (3395983) | 3395983..3396465 | - | 483 | WP_001169431.1 | hypothetical protein | - |
| JYN33_RS16120 (3396453) | 3396453..3397280 | - | 828 | WP_000662269.1 | hypothetical protein | - |
| JYN33_RS16125 (3397286) | 3397286..3397855 | - | 570 | WP_000647409.1 | hypothetical protein | - |
| JYN33_RS16130 (3397857) | 3397857..3399305 | - | 1449 | WP_000768340.1 | hypothetical protein | - |
| JYN33_RS21175 (3399325) | 3399325..3399789 | - | 465 | WP_000277015.1 | TcpQ domain-containing protein | - |
| JYN33_RS16140 (3399869) | 3399869..3401467 | - | 1599 | WP_000680636.1 | hypothetical protein | - |
| JYN33_RS16145 (3401554) | 3401554..3402300 | - | 747 | WP_000469472.1 | hypothetical protein | VF |
| JYN33_RS16150 (3402357) | 3402357..3402845 | - | 489 | WP_000615269.1 | hypothetical protein | VF |
| JYN33_RS16155 (3402842) | 3402842..3403705 | - | 864 | WP_000353269.1 | hypothetical protein | - |
| JYN33_RS21180 (3404069) | 3404069..3404333 | + | 265 | Protein_3179 | IS3 family transposase | - |
| JYN33_RS16160 (3404668) | 3404668..3405987 | + | 1320 | WP_001218450.1 | hypothetical protein ; Integrase | Integrase |
| JYN33_RS16165 (3406025) | 3406025..3407077 | - | 1053 | WP_000575274.1 | macro domain-containing protein | - |
| JYN33_RS16170 (3407091) | 3407091..3407738 | - | 648 | WP_000026701.1 | DUF4433 domain-containing protein | - |
| JYN33_RS16175 (3407839) | 3407839..3408672 | - | 834 | WP_001192753.1 | DUF4942 domain-containing protein | - |
| JYN33_RS16180 (3408788) | 3408788..3409129 | - | 342 | WP_001194750.1 | TA system toxin CbtA family protein | Toxin Detail |
| JYN33_RS16185 (3409173) | 3409173..3409514 | - | 342 | WP_000380487.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin Detail |
| JYN33_RS16190 (3409537) | 3409537..3409758 | - | 222 | WP_000691988.1 | DUF987 family protein | - |
| JYN33_RS16195 (3409755) | 3409755..3410255 | - | 501 | WP_001090292.1 | DNA repair protein RadC | - |
| JYN33_RS16200 (3410268) | 3410268..3411086 | - | 819 | WP_001234407.1 | DUF932 domain-containing protein | - |
| JYN33_RS16205 (3411188) | 3411188..3411433 | - | 246 | WP_000082136.1 | DUF905 domain-containing protein | - |
| JYN33_RS16210 (3411508) | 3411508..3412422 | - | 915 | WP_000797249.1 | hypothetical protein | - |
| JYN33_RS16215 (3412487) | 3412487..3412690 | - | 204 | WP_000508162.1 | hypothetical protein | - |
| JYN33_RS16220 (3412707) | 3412707..3412853 | - | 147 | WP_023892166.1 | hypothetical protein | - |
| JYN33_RS16225 (3412926) | 3412926..3413640 | - | 715 | Protein_3193 | WYL domain-containing protein | - |
| JYN33_RS16230 (3413993) | 3413993..3414298 | - | 306 | WP_000227087.1 | hypothetical protein | - |
| JYN33_RS16235 (3414666) | 3414666..3415784 | + | 1119 | WP_000833601.1 | hypothetical protein | - |
| JYN33_RS16240 (3415930) | 3415930..3416217 | + | 288 | WP_000788133.1 | hypothetical protein | - |
| JYN33_RS16245 (3416369) | 3416369..3419476 | - | 3108 | WP_000194036.1 | type I restriction endonuclease subunit R | - |
| JYN33_RS16250 (3419606) | 3419606..3420817 | - | 1212 | WP_231845620.1 | restriction endonuclease subunit S | - |
| JYN33_RS16255 (3420823) | 3420823..3422379 | - | 1557 | WP_000202810.1 | type I restriction-modification system subunit M | - |
| JYN33_RS16260 (3422944) | 3422944..3423564 | - | 621 | WP_000861012.1 | inovirus Gp2 family protein | - |
| JYN33_RS16265 (3423811) | 3423811..3425304 | - | 1494 | WP_000923662.1 | YfjI family protein | - |
| JYN33_RS16270 (3425441) | 3425441..3425677 | - | 237 | WP_013991366.1 | AlpA family phage regulatory protein | - |
| JYN33_RS16275 (3426045) | 3426045..3427148 | - | 1104 | WP_000371010.1 | hypothetical protein | - |
| JYN33_RS16285 (3427920) | 3427920..3429170 | - | 1251 | WP_000893244.1 | glutamate-5-semialdehyde dehydrogenase | - |
| JYN33_RS16290 (3429182) | 3429182..3430285 | - | 1104 | WP_001285272.1 | glutamate 5-kinase | - |
| JYN33_RS16295 (3430724) | 3430724..3431125 | - | 402 | WP_000174691.1 | sigma factor-binding protein Crl | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|