MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 110557 bp
Accession: NZ_CP074185 Location: 1..110557 Organism: Raoultella planticola strain JBIWA001 Replicon: plasmid pJBIWA001_3
Accession: NZ_CP074185 Location: 1..110557 Organism: Raoultella planticola strain JBIWA001 Replicon: plasmid pJBIWA001_3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KGP19_RS28270 (KGP19_28165) | 19..894 | + | 876 | WP_004098982.1 | replication initiation protein | - |
| KGP19_RS28275 (KGP19_28170) | 1567..2193 | + | 627 | WP_004197649.1 | Chromosome-partitioning ATPase Soj | VF |
| KGP19_RS28280 | 2190..2492 | + | 303 | WP_004197636.1 | hypothetical protein | - |
| KGP19_RS28285 (KGP19_28180) | 2948..3742 | - | 795 | WP_004197635.1 | site-specific integrase | - |
| KGP19_RS28290 (KGP19_28185) | 3940..4956 | - | 1017 | WP_017899884.1 | hypothetical protein | - |
| KGP19_RS28295 (KGP19_28190) | 4967..5281 | - | 315 | WP_053389906.1 | hypothetical protein | - |
| KGP19_RS28300 (KGP19_28195) | 5308..5703 | - | 396 | WP_017899885.1 | hypothetical protein | - |
| KGP19_RS28305 (KGP19_28200) | 5872..6177 | - | 306 | WP_013023785.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KGP19_RS28310 (KGP19_28205) | 6179..6397 | - | 219 | WP_001568025.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KGP19_RS28315 (KGP19_28210) | 7215..7505 | - | 291 | WP_013023783.1 | hypothetical protein | - |
| KGP19_RS28320 (KGP19_28215) | 7502..8629 | - | 1128 | WP_013023782.1 | DUF4238 domain-containing protein | - |
| KGP19_RS28325 (KGP19_28220) | 8663..10186 | - | 1524 | WP_017899887.1 | hypothetical protein | - |
| KGP19_RS28330 (KGP19_28225) | 10462..11241 | - | 780 | WP_013023780.1 | hypothetical protein | - |
| KGP19_RS28335 (KGP19_28230) | 11254..11754 | - | 501 | WP_013023779.1 | HEPN family nuclease | - |
| KGP19_RS28340 (KGP19_28235) | 12029..12292 | + | 264 | WP_013023778.1 | hypothetical protein | - |
| KGP19_RS28345 (KGP19_28240) | 12289..12855 | + | 567 | WP_013023777.1 | hypothetical protein | - |
| KGP19_RS28350 (KGP19_28245) | 12886..13380 | + | 495 | WP_013023776.1 | hypothetical protein | - |
| KGP19_RS28355 (KGP19_28250) | 13424..13792 | + | 369 | WP_048337418.1 | hypothetical protein | - |
| KGP19_RS28360 (KGP19_28255) | 13826..14029 | + | 204 | WP_004098931.1 | HHA domain-containing protein | - |
| KGP19_RS28365 (KGP19_28260) | 14078..14335 | + | 258 | WP_017899889.1 | hypothetical protein | - |
| KGP19_RS28370 (KGP19_28265) | 14411..14665 | + | 255 | WP_009653916.1 | hypothetical protein | - |
| KGP19_RS28375 (KGP19_28270) | 14801..15577 | - | 777 | WP_077260495.1 | DUF2971 domain-containing protein | - |
| KGP19_RS28380 (KGP19_28275) | 15818..16141 | - | 324 | WP_017899891.1 | hypothetical protein | - |
| KGP19_RS28385 (KGP19_28280) | 16320..16589 | - | 270 | Protein_23 | SOS response-associated peptidase family protein | - |
| KGP19_RS28390 (KGP19_28285) | 16677..17381 | + | 705 | Protein_24 | IS110 family transposase ISCARN91 | Transposase |
| KGP19_RS28395 (KGP19_28290) | 17423..18028 | - | 606 | WP_000509966.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| KGP19_RS28400 (KGP19_28295) | 18123..21371 | + | 3249 | Protein_26 | Tn3 family transposase TnpA_Tn5403 | Transposase |
| KGP19_RS28405 (KGP19_28305) | 21768..21935 | + | 168 | Protein_27 | IS5 family transposase IS903 | Transposase |
| KGP19_RS28410 (KGP19_28310) | 22254..23279 | - | 1026 | WP_001101446.1 | IS110 family transposase | - |
| KGP19_RS28415 (KGP19_28315) | 23666..24691 | - | 1026 | WP_001101446.1 | IS110 family transposase | - |
| KGP19_RS28420 (KGP19_28320) | 25118..27310 | + | 2193 | WP_004099052.1 | 1,4-alpha-glucan branching enzyme | - |
| KGP19_RS28425 (KGP19_28325) | 27440..28723 | + | 1284 | WP_071047168.1 | glucose-1-phosphate adenylyltransferase | - |
| KGP19_RS28430 (KGP19_28330) | 28812..30245 | + | 1434 | WP_049100408.1 | glycogen synthase GlgA | - |
| KGP19_RS28435 (KGP19_28335) | 30264..32711 | + | 2448 | WP_065890392.1 | glycogen phosphorylase | - |
| KGP19_RS28440 (KGP19_28340) | 32825..34468 | + | 1644 | WP_004197675.1 | phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) | - |
| KGP19_RS28445 (KGP19_28345) | 34593..35159 | + | 567 | WP_004197678.1 | LuxR C-terminal-related transcriptional regulator | - |
| KGP19_RS28450 (KGP19_28350) | 35494..35772 | + | 279 | WP_004197671.1 | hypothetical protein | - |
| KGP19_RS28455 (KGP19_28355) | 35800..35991 | - | 192 | Protein_37 | hypothetical protein | - |
| KGP19_RS28460 (KGP19_28360) | 36012..37409 | - | 1398 | WP_009653207.1 | ISNCY family transposase ISKpn21 | Transposase |
| KGP19_RS28465 (KGP19_28365) | 37520..39052 | + | 1533 | WP_004118819.1 | IS3 family transposase ISKpn38 | Transposase |
| KGP19_RS28470 (KGP19_28370) | 39306..40205 | + | 900 | WP_003026794.1 | hypothetical protein | - |
| KGP19_RS28475 (KGP19_28375) | 40276..40479 | - | 204 | WP_003026790.1 | HHA domain-containing protein | - |
| KGP19_RS28480 (KGP19_28380) | 40554..40907 | - | 354 | WP_003026788.1 | hypothetical protein | - |
| KGP19_RS28485 (KGP19_28385) | 40951..41445 | - | 495 | WP_064360948.1 | hypothetical protein | - |
| KGP19_RS28490 (KGP19_28390) | 41477..42049 | - | 573 | WP_032932889.1 | hypothetical protein | - |
| KGP19_RS28495 (KGP19_28395) | 42037..42306 | - | 270 | WP_003026780.1 | hypothetical protein | - |
| KGP19_RS28500 (KGP19_28400) | 42620..42799 | + | 180 | WP_004118349.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| KGP19_RS28505 (KGP19_28405) | 42786..42884 | + | 99 | WP_004118688.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP19_RS28510 | 42921..43083 | + | 163 | Protein_48 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP19_RS28515 (KGP19_28410) | 43263..43697 | - | 435 | WP_004118347.1 | hypothetical protein | - |
| KGP19_RS28520 (KGP19_28415) | 43913..45313 | - | 1401 | WP_064360950.1 | copper resistance membrane spanning protein PcoS | - |
| KGP19_RS28525 (KGP19_28420) | 45310..45990 | - | 681 | WP_001188930.1 | Transcriptional activator protein CopR | VF |
| KGP19_RS28530 (KGP19_28425) | 46045..46974 | - | 930 | WP_004118344.1 | copper resistance inner membrane protein PcoD | - |
| KGP19_RS28535 (KGP19_28430) | 46979..47359 | - | 381 | WP_085397508.1 | copper resistance system metallochaperone PcoC | - |
| KGP19_RS28540 (KGP19_28435) | 47399..48289 | - | 891 | WP_001378118.1 | copper resistance outer membrane transporter PcoB | - |
| KGP19_RS28545 (KGP19_28440) | 48295..50112 | - | 1818 | WP_073554100.1 | multicopper oxidase PcoA | - |
| KGP19_RS28550 (KGP19_28445) | 50347..50796 | + | 450 | WP_064360952.1 | hypothetical protein | - |
| KGP19_RS28555 (KGP19_28450) | 51085..51822 | + | 738 | WP_000287501.1 | Murein DD-endopeptidase MepM | VF |
| KGP19_RS28560 (KGP19_28455) | 51856..52053 | - | 198 | WP_000843497.1 | DUF2933 domain-containing protein | - |
| KGP19_RS28565 (KGP19_28460) | 52094..54565 | - | 2472 | WP_129897305.1 | Ag(+)-translocating P-type ATPase SilP | - |
| KGP19_RS28570 (KGP19_28465) | 54663..55103 | - | 441 | WP_004118665.1 | DUF411 domain-containing protein | - |
| KGP19_RS28575 (KGP19_28470) | 55190..58336 | - | 3147 | WP_000574021.1 | Cu(+)/Ag(+) efflux RND transporter permease subunit SilA | - |
| KGP19_RS28580 (KGP19_28475) | 58347..59639 | - | 1293 | WP_001485328.1 | Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB | - |
| KGP19_RS28585 (KGP19_28480) | 59753..60106 | - | 354 | WP_001246153.1 | cation efflux system protein CusF | - |
| KGP19_RS28590 (KGP19_28485) | 60135..61520 | - | 1386 | WP_000475512.1 | Cation efflux system protein CusC | VF |
| KGP19_RS28595 (KGP19_28490) | 61710..62390 | + | 681 | WP_000697968.1 | Transcriptional regulatory protein CusR | VF |
| KGP19_RS28600 (KGP19_28495) | 62383..63858 | + | 1476 | WP_040118426.1 | copper/silver sensor histidine kinase SilS | - |
| KGP19_RS28605 (KGP19_28500) | 64104..64535 | + | 432 | WP_007374411.1 | silver-binding protein SilE | - |
| KGP19_RS28610 (KGP19_28505) | 64681..65055 | + | 375 | WP_064375608.1 | DUF305 domain-containing protein | - |
| KGP19_RS28615 (KGP19_28510) | 65463..66371 | - | 909 | WP_007374408.1 | HNH endonuclease | - |
| KGP19_RS28620 (KGP19_28515) | 66601..67056 | - | 456 | WP_001166628.1 | IS607 family transposase ISChh1 | Transposase |
| KGP19_RS28625 (KGP19_28520) | 67128..67478 | + | 351 | WP_001294660.1 | mercuric transport protein MerT | - |
| KGP19_RS28630 (KGP19_28525) | 67512..70520 | - | 3009 | WP_004098837.1 | Tn3 family transposase ISEc63 | Transposase |
| KGP19_RS28635 (KGP19_28530) | 70684..71241 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| KGP19_RS28640 (KGP19_28535) | 71424..72284 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KGP19_RS28645 (KGP19_28540) | 72543..73019 | + | 477 | WP_013023839.1 | WbuC family cupin fold metalloprotein | - |
| KGP19_RS28650 (KGP19_28545) | 73066..73941 | - | 876 | WP_011091028.1 | Beta-lactamase CTX-M-1 | ARG |
| KGP19_RS28655 (KGP19_28550) | 74276..74470 | - | 195 | Protein_77 | IS1380 family transposase | - |
| KGP19_RS28660 (KGP19_28555) | 74527..75224 | + | 698 | WP_223216367.1 | IS1 family transposase IS1G | Transposase |
| KGP19_RS28665 (KGP19_28560) | 75240..76145 | - | 906 | Protein_79 | IS1380 family transposase ISEcp1 | Transposase |
| KGP19_RS28670 (KGP19_28565) | 76384..77126 | + | 743 | Protein_80 | ISKra4 family transposase ISKpn19 | Transposase |
| KGP19_RS28675 (KGP19_28570) | 77159..77587 | + | 429 | Protein_81 | Tn3 family transposase TnpR_ISMex22 | Transposase |
| KGP19_RS28680 (KGP19_28575) | 77906..78562 | - | 657 | WP_001516695.1 | Pentapeptide repeat protein | ARG |
| KGP19_RS28685 (KGP19_28580) | 78844..80235 | - | 1392 | WP_001493761.1 | ISKra4 family transposase ISKpn19 | Transposase |
| KGP19_RS28690 (KGP19_28585) | 80272..80844 | - | 573 | WP_001493762.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| KGP19_RS28695 (KGP19_28590) | 80981..81526 | - | 546 | WP_001493763.1 | plasmid pRiA4b ORF-3 family protein | - |
| KGP19_RS28700 (KGP19_28595) | 81622..82197 | + | 576 | WP_077256884.1 | DUF4113 domain-containing protein | - |
| KGP19_RS28705 (KGP19_28600) | 82344..82625 | - | 282 | WP_000780222.1 | helix-turn-helix transcriptional regulator | - |
| KGP19_RS28710 (KGP19_28605) | 82606..82935 | - | 330 | WP_000493286.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP19_RS28715 (KGP19_28610) | 83171..83428 | + | 258 | WP_048337415.1 | hypothetical protein | - |
| KGP19_RS28720 (KGP19_28615) | 83462..84166 | - | 705 | WP_001067858.1 | IS6 family transposase IS15DI | Transposase |
| KGP19_RS28725 (KGP19_28620) | 84231..85028 | + | 798 | Protein_91 | IS256 family transposase ISSoEn2 | Transposase |
| KGP19_RS28730 (KGP19_28625) | 85164..85577 | - | 414 | WP_013023817.1 | helix-turn-helix domain-containing protein | - |
| KGP19_RS28735 (KGP19_28630) | 85578..85856 | - | 279 | WP_004152721.1 | helix-turn-helix transcriptional regulator | - |
| KGP19_RS28740 (KGP19_28635) | 85846..86166 | - | 321 | WP_004152720.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP19_RS28745 (KGP19_28640) | 86247..86471 | - | 225 | WP_004152719.1 | hypothetical protein | - |
| KGP19_RS28750 (KGP19_28645) | 86482..86694 | - | 213 | WP_013023815.1 | hypothetical protein | - |
| KGP19_RS28755 (KGP19_28650) | 86755..87111 | - | 357 | WP_013023814.1 | hypothetical protein | - |
| KGP19_RS28760 (KGP19_28655) | 87953..88270 | - | 318 | WP_013023810.1 | hypothetical protein | - |
| KGP19_RS28765 (KGP19_28660) | 88285..88635 | - | 351 | WP_013023809.1 | hypothetical protein | - |
| KGP19_RS28770 (KGP19_28665) | 88632..88904 | - | 273 | WP_014343506.1 | hypothetical protein | - |
| KGP19_RS28775 (KGP19_28670) | 89597..89716 | - | 120 | WP_159376494.1 | type I toxin-antitoxin system Hok family toxin | - |
| KGP19_RS28780 | 89661..89813 | - | 153 | WP_004150508.1 | DUF5431 family protein | - |
| KGP19_RS28785 (KGP19_28675) | 89983..90357 | - | 375 | WP_047665807.1 | hypothetical protein | - |
| KGP19_RS28790 (KGP19_28680) | 90413..90739 | - | 327 | WP_013023807.1 | hypothetical protein | - |
| KGP19_RS28795 (KGP19_28685) | 90736..91464 | - | 729 | WP_001568058.1 | plasmid SOS inhibition protein A | - |
| KGP19_RS28800 (KGP19_28690) | 91461..91892 | - | 432 | WP_013023806.1 | conjugation system SOS inhibitor PsiB | - |
| KGP19_RS28805 (KGP19_28695) | 91937..93994 | - | 2058 | WP_013023805.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP19_RS28810 (KGP19_28700) | 94064..94312 | - | 249 | WP_001568055.1 | DUF905 domain-containing protein | - |
| KGP19_RS28815 (KGP19_28705) | 94361..94903 | - | 543 | WP_223526253.1 | single-stranded DNA-binding protein | - |
| KGP19_RS28820 (KGP19_28710) | 95733..96296 | - | 564 | WP_004152756.1 | methyltransferase | - |
| KGP19_RS28825 (KGP19_28715) | 96344..97699 | - | 1356 | WP_015344996.1 | DUF3560 domain-containing protein | - |
| KGP19_RS28830 (KGP19_28720) | 97751..97981 | - | 231 | WP_001568051.1 | hypothetical protein | - |
| KGP19_RS28835 (KGP19_28725) | 98073..98300 | - | 228 | WP_001568050.1 | hypothetical protein | - |
| KGP19_RS28840 (KGP19_28730) | 99085..99402 | - | 318 | WP_223526254.1 | hypothetical protein | - |
| KGP19_RS28845 (KGP19_28735) | 99437..99691 | - | 255 | WP_011977779.1 | DNA polymerase III subunit theta | - |
| KGP19_RS28850 (KGP19_28740) | 99879..100070 | - | 192 | WP_001568047.1 | hypothetical protein | - |
| KGP19_RS28855 (KGP19_28745) | 100113..100619 | - | 507 | WP_013214014.1 | antirestriction protein ArdA | - |
| KGP19_RS28860 (KGP19_28750) | 100662..101090 | - | 429 | WP_004152356.1 | antirestriction protein | - |
| KGP19_RS28865 (KGP19_28755) | 101771..102538 | - | 768 | WP_001568044.1 | hypothetical protein | - |
| KGP19_RS28870 (KGP19_28760) | 102592..103011 | - | 420 | WP_001568043.1 | DUF1380 domain-containing protein | - |
| KGP19_RS28875 (KGP19_28765) | 103021..103242 | - | 222 | WP_001568042.1 | hypothetical protein | - |
| KGP19_RS28880 (KGP19_28770) | 103242..103943 | - | 702 | WP_004152355.1 | DNA methylase | - |
| KGP19_RS28885 | 104015..104184 | - | 170 | Protein_123 | hypothetical protein | - |
| KGP19_RS28890 (KGP19_28775) | 104380..104610 | - | 231 | WP_001568040.1 | hypothetical protein | - |
| KGP19_RS28895 (KGP19_28780) | 104674..105345 | - | 672 | WP_015345000.1 | plasmid partitioning/stability family protein | - |
| KGP19_RS28900 (KGP19_28785) | 105348..106319 | - | 972 | WP_001568038.1 | plasmid segregation protein ParM | - |
| KGP19_RS28905 (KGP19_28790) | 106568..108055 | - | 1488 | WP_004178082.1 | group II intron reverse transcriptase/maturase | - |
| KGP19_RS28910 (KGP19_28795) | 108462..108893 | + | 432 | WP_001568036.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KGP19_RS28915 (KGP19_28800) | 108893..110164 | + | 1272 | WP_004197646.1 | Y-family DNA polymerase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|