MGE detailed information
MGE type: Conjugative plasmid MGE length: 90433 bp
Accession: NZ_CP074148 Location: 1..90433 Organism: Serratia sp. JSRIV001 Replicon: plasmid pJSRIV001_1
Accession: NZ_CP074148 Location: 1..90433 Organism: Serratia sp. JSRIV001 Replicon: plasmid pJSRIV001_1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KGP17_RS27325 (KGP17_27235) | 1359..2180 | - | 822 | WP_223499791.1 | hypothetical protein | - |
| KGP17_RS27945 | 2469..2600 | - | 132 | WP_256444966.1 | hypothetical protein | - |
| KGP17_RS27330 (KGP17_27245) | 3319..3735 | + | 417 | WP_223499792.1 | hypothetical protein | - |
| KGP17_RS27335 (KGP17_27250) | 4055..4609 | + | 555 | WP_223498432.1 | Fimbria A protein | VF |
| KGP17_RS27340 (KGP17_27255) | 4679..5230 | + | 552 | WP_223498431.1 | PAP fimbrial minor pilin protein | VF |
| KGP17_RS27345 (KGP17_27260) | 5274..7781 | + | 2508 | WP_223499717.1 | Outer membrane usher protein PapC | VF |
| KGP17_RS27350 (KGP17_27265) | 7840..8604 | + | 765 | WP_223498430.1 | putative fimbrial chaperone YfcS | VF |
| KGP17_RS27355 (KGP17_27270) | 8645..9265 | + | 621 | WP_223498429.1 | fimbrial protein | - |
| KGP17_RS27360 (KGP17_27275) | 9258..9806 | + | 549 | WP_223498428.1 | putative fimbrial-like protein YfcQ | VF |
| KGP17_RS27365 (KGP17_27280) | 9818..10306 | + | 489 | WP_223498427.1 | putative fimbrial-like protein YfcQ | VF |
| KGP17_RS27370 (KGP17_27285) | 10316..10864 | + | 549 | WP_223498426.1 | Fimbrial adapter PapK | VF |
| KGP17_RS27375 (KGP17_27290) | 11017..12054 | + | 1038 | WP_223499793.1 | fimbrial protein | - |
| KGP17_RS27380 (KGP17_27295) | 12159..12389 | + | 231 | WP_223499794.1 | ANR family transcriptional regulator | - |
| KGP17_RS27385 (KGP17_27300) | 12737..12958 | + | 222 | WP_223499795.1 | hypothetical protein | - |
| KGP17_RS27390 (KGP17_27305) | 13043..13204 | + | 162 | Protein_15 | TonB-dependent receptor | - |
| KGP17_RS27395 (KGP17_27310) | 13483..14430 | + | 948 | WP_223499796.1 | Recombination-promoting nuclease RpnA | VF |
| KGP17_RS27400 (KGP17_27315) | 14459..14707 | + | 249 | Protein_17 | DUF2913 family protein | - |
| KGP17_RS27405 (KGP17_27320) | 14762..15457 | - | 696 | WP_223499797.1 | IS6 family transposase ISEas1 | Transposase |
| KGP17_RS27410 (KGP17_27325) | 15509..15766 | - | 258 | Protein_19 | IS3 family transposase ISBcen15 | Transposase |
| KGP17_RS27415 (KGP17_27330) | 15911..16405 | - | 495 | WP_223499798.1 | GNAT family N-acetyltransferase | - |
| KGP17_RS27420 (KGP17_27335) | 17398..18336 | - | 939 | WP_223499825.1 | Replication protein | - |
| KGP17_RS27425 (KGP17_27340) | 18753..19019 | - | 267 | WP_115160188.1 | replication regulatory protein RepA | - |
| KGP17_RS27430 (KGP17_27345) | 19165..19710 | - | 546 | WP_223499799.1 | Phospholipase D | VF |
| KGP17_RS27435 (KGP17_27350) | 19846..20583 | - | 738 | WP_223499800.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| KGP17_RS27440 (KGP17_27355) | 20585..25831 | - | 5247 | WP_223499801.1 | Multifunctional conjugation protein TraI | Relaxase |
| KGP17_RS27445 (KGP17_27360) | 25831..26487 | - | 657 | WP_223499829.1 | hypothetical protein | - |
| KGP17_RS27450 (KGP17_27365) | 26474..27040 | - | 567 | WP_223499802.1 | type IV conjugative transfer system protein TraE | - |
| KGP17_RS27455 (KGP17_27370) | 27055..27360 | - | 306 | WP_065684418.1 | type IV conjugative transfer system protein TraL | - |
| KGP17_RS27460 (KGP17_27375) | 27510..27860 | - | 351 | WP_223499803.1 | type IV conjugative transfer system pilin TraA | - |
| KGP17_RS27465 (KGP17_27380) | 27925..28254 | - | 330 | WP_245398332.1 | TraY domain-containing protein | - |
| KGP17_RS27470 (KGP17_27385) | 28507..28665 | - | 159 | WP_223538575.1 | TraY domain-containing protein | - |
| KGP17_RS27475 (KGP17_27390) | 28961..29740 | + | 780 | WP_223499806.1 | helix-turn-helix domain-containing protein | - |
| KGP17_RS27480 (KGP17_27395) | 29978..30373 | - | 396 | WP_223499807.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KGP17_RS27485 (KGP17_27400) | 30795..31277 | + | 483 | WP_223499808.1 | hypothetical protein | VF |
| KGP17_RS27490 (KGP17_27405) | 31669..32226 | - | 558 | WP_223499809.1 | hypothetical protein | - |
| KGP17_RS27495 (KGP17_27410) | 32168..32533 | - | 366 | WP_223499810.1 | hypothetical protein | - |
| KGP17_RS27500 (KGP17_27415) | 32599..33264 | - | 666 | WP_223499811.1 | hypothetical protein | - |
| KGP17_RS27505 (KGP17_27420) | 33525..33785 | + | 261 | WP_223499812.1 | hypothetical protein | - |
| KGP17_RS27510 (KGP17_27425) | 33817..33984 | + | 168 | WP_223499813.1 | hypothetical protein | - |
| KGP17_RS27515 (KGP17_27430) | 34031..34285 | - | 255 | WP_223499826.1 | hypothetical protein | - |
| KGP17_RS27520 (KGP17_27435) | 34380..34727 | - | 348 | WP_223499814.1 | hypothetical protein | - |
| KGP17_RS27525 (KGP17_27440) | 34787..35155 | - | 369 | WP_223499815.1 | hypothetical protein | - |
| KGP17_RS27530 (KGP17_27445) | 35896..36255 | - | 360 | WP_050313121.1 | transcriptional regulator | - |
| KGP17_RS27535 (KGP17_27450) | 36260..36562 | - | 303 | WP_050313120.1 | type II toxin-antitoxin system HigB family toxin | - |
| KGP17_RS27540 (KGP17_27455) | 36689..37510 | - | 822 | WP_223499827.1 | N-6 DNA methylase | - |
| KGP17_RS27545 (KGP17_27460) | 37603..37848 | - | 246 | WP_223499816.1 | hypothetical protein | - |
| KGP17_RS27550 (KGP17_27465) | 37892..38326 | - | 435 | WP_223499817.1 | hypothetical protein | - |
| KGP17_RS27555 (KGP17_27470) | 39017..39223 | - | 207 | WP_115160158.1 | hypothetical protein | - |
| KGP17_RS27560 (KGP17_27475) | 39325..39645 | - | 321 | WP_223499818.1 | theronine dehydrogenase | - |
| KGP17_RS27565 (KGP17_27480) | 39642..39992 | - | 351 | WP_223499819.1 | conjugation system SOS inhibitor PsiB family protein | - |
| KGP17_RS27570 (KGP17_27485) | 40032..41999 | - | 1968 | WP_223499820.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP17_RS27575 (KGP17_27490) | 42153..42362 | - | 210 | WP_223499821.1 | DUF905 family protein | - |
| KGP17_RS27580 (KGP17_27495) | 42418..42975 | - | 558 | WP_223499822.1 | single-stranded DNA-binding protein | - |
| KGP17_RS27585 (KGP17_27500) | 43923..44498 | - | 576 | WP_223499823.1 | methyltransferase | - |
| KGP17_RS27590 (KGP17_27505) | 44544..45920 | - | 1377 | WP_223499824.1 | DUF3560 domain-containing protein | - |
| KGP17_RS27595 (KGP17_27510) | 46621..47196 | + | 576 | WP_223499745.1 | hypothetical protein | - |
| KGP17_RS27600 (KGP17_27515) | 47201..47359 | - | 159 | WP_223499746.1 | hypothetical protein | - |
| KGP17_RS27605 (KGP17_27520) | 47776..48198 | + | 423 | WP_223499747.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KGP17_RS27610 (KGP17_27525) | 48210..49470 | + | 1261 | Protein_59 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KGP17_RS27615 (KGP17_27530) | 49467..50009 | + | 543 | WP_223499748.1 | hypothetical protein | - |
| KGP17_RS27620 (KGP17_27535) | 50426..50707 | - | 282 | WP_223499749.1 | helix-turn-helix transcriptional regulator | - |
| KGP17_RS27625 (KGP17_27540) | 50694..51017 | - | 324 | WP_059202210.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KGP17_RS27630 (KGP17_27545) | 51136..51441 | - | 306 | WP_223499750.1 | hypothetical protein | - |
| KGP17_RS27635 (KGP17_27550) | 51812..53902 | - | 2091 | WP_223499751.1 | DEAD/DEAH box helicase | - |
| KGP17_RS27640 (KGP17_27555) | 53917..54270 | - | 354 | WP_223499752.1 | DUF1870 family protein | - |
| KGP17_RS27645 (KGP17_27560) | 54315..54521 | - | 207 | WP_223499753.1 | hypothetical protein | - |
| KGP17_RS27650 (KGP17_27565) | 54782..55045 | - | 264 | WP_223499754.1 | hypothetical protein | - |
| KGP17_RS27655 (KGP17_27570) | 55088..55408 | - | 321 | WP_223499755.1 | hypothetical protein | - |
| KGP17_RS27660 (KGP17_27575) | 55405..55854 | - | 450 | WP_223499756.1 | hypothetical protein | - |
| KGP17_RS27665 (KGP17_27580) | 55855..57183 | - | 1329 | WP_223499757.1 | ParB/RepB/Spo0J family partition protein | - |
| KGP17_RS27670 (KGP17_27585) | 57186..58034 | - | 849 | WP_223499758.1 | ParA family protein | - |
| KGP17_RS27675 (KGP17_27590) | 58083..58421 | - | 339 | WP_223499759.1 | hypothetical protein | - |
| KGP17_RS27680 (KGP17_27595) | 58581..59051 | - | 471 | WP_223499760.1 | hypothetical protein | - |
| KGP17_RS27685 (KGP17_27600) | 59203..59523 | - | 321 | WP_223499761.1 | hypothetical protein | - |
| KGP17_RS27690 (KGP17_27605) | 59520..59987 | - | 468 | WP_223499762.1 | hypothetical protein | - |
| KGP17_RS27695 (KGP17_27610) | 60029..60538 | - | 510 | WP_223499763.1 | hypothetical protein | - |
| KGP17_RS27700 (KGP17_27615) | 60528..61214 | - | 687 | WP_223499764.1 | PspA/IM30 family protein | - |
| KGP17_RS27705 (KGP17_27620) | 61462..61737 | - | 276 | WP_223499765.1 | homeobox domain-containing protein | - |
| KGP17_RS27710 (KGP17_27625) | 61779..62258 | - | 480 | WP_223499766.1 | DNA repair protein RadC | - |
| KGP17_RS27715 | 62799..63015 | + | 217 | Protein_80 | hypothetical protein | - |
| KGP17_RS27720 (KGP17_27630) | 63246..63503 | - | 258 | WP_223499767.1 | hypothetical protein | - |
| KGP17_RS27725 (KGP17_27635) | 63584..64012 | - | 429 | WP_223499768.1 | antirestriction protein | - |
| KGP17_RS27730 (KGP17_27640) | 64011..64220 | + | 210 | WP_223499769.1 | hypothetical protein | - |
| KGP17_RS27735 (KGP17_27645) | 64405..65049 | - | 645 | WP_223499770.1 | hypothetical protein | - |
| KGP17_RS27740 (KGP17_27650) | 65099..66670 | - | 1572 | WP_223499771.1 | IS66 family transposase ISCro1 | Transposase |
| KGP17_RS27745 (KGP17_27655) | 66690..67037 | - | 348 | WP_223499772.1 | IS66 family transposase ISCro1 | Transposase |
| KGP17_RS27750 (KGP17_27660) | 67034..67639 | - | 606 | WP_223499773.1 | IS66 family transposase ISCro1 | Transposase |
| KGP17_RS27755 (KGP17_27665) | 67564..68298 | - | 735 | WP_223499774.1 | N-6 DNA methylase | - |
| KGP17_RS27760 (KGP17_27670) | 68871..69842 | - | 972 | WP_223499775.1 | ParB family protein | - |
| KGP17_RS27765 (KGP17_27675) | 69851..71044 | - | 1194 | WP_223499776.1 | AAA family ATPase | - |
| KGP17_RS27770 (KGP17_27680) | 71347..71589 | + | 243 | WP_223499777.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| KGP17_RS27775 (KGP17_27685) | 71579..71866 | + | 288 | WP_223499778.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KGP17_RS27780 (KGP17_27690) | 72116..72916 | - | 801 | WP_223499828.1 | IS91 family transposase ISMno23 | Transposase |
| KGP17_RS27785 (KGP17_27695) | 73766..74461 | + | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP17_RS27790 (KGP17_27700) | 74528..75388 | - | 861 | WP_223499780.1 | class I SAM-dependent methyltransferase | - |
| KGP17_RS27795 (KGP17_27705) | 75539..75706 | + | 168 | Protein_96 | transposase | - |
| KGP17_RS27800 | 76253..76765 | + | 513 | WP_223499781.1 | IS3 family transposase ISPa31 | Transposase |
| KGP17_RS27805 (KGP17_27715) | 76903..77424 | + | 522 | WP_223499782.1 | IS3 family transposase ISAs9 | Transposase |
| KGP17_RS27810 (KGP17_27720) | 77462..78157 | - | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP17_RS27815 (KGP17_27725) | 78239..78430 | + | 192 | WP_223499783.1 | phospholipase D-like domain-containing protein | - |
| KGP17_RS27820 (KGP17_27730) | 79069..79401 | - | 333 | WP_223498387.1 | hypothetical protein | - |
| KGP17_RS27825 (KGP17_27735) | 79628..79885 | - | 258 | WP_223498386.1 | TraR/DksA family transcriptional regulator | - |
| KGP17_RS27835 (KGP17_27745) | 80589..80750 | - | 162 | Protein_103 | helix-turn-helix domain-containing protein | - |
| KGP17_RS27840 (KGP17_27750) | 80807..81220 | + | 414 | Protein_104 | IS6 family transposase ISYps1 | Transposase |
| KGP17_RS27845 (KGP17_27755) | 81286..81981 | + | 696 | WP_223498400.1 | IS6 family transposase ISEas1 | Transposase |
| KGP17_RS27850 | 82102..82311 | + | 210 | Protein_106 | recombinase family protein | - |
| KGP17_RS27855 (KGP17_27765) | 82517..84649 | - | 2133 | WP_223499784.1 | TonB-dependent receptor | - |
| KGP17_RS27860 (KGP17_27770) | 84802..85224 | - | 423 | WP_245398331.1 | DUF2946 domain-containing protein | - |
| KGP17_RS27865 (KGP17_27775) | 85622..86317 | - | 696 | WP_223499779.1 | IS6 family transposase ISEas1 | Transposase |
| KGP17_RS27870 (KGP17_27780) | 86380..86478 | - | 99 | Protein_110 | IS6 family transposase | - |
| KGP17_RS27875 (KGP17_27785) | 86679..86969 | - | 291 | WP_223499786.1 | hypothetical protein | - |
| KGP17_RS27880 (KGP17_27790) | 87221..88153 | + | 933 | WP_223499787.1 | Recombination-promoting nuclease RpnA | VF |
| KGP17_RS27885 | 88182..88442 | + | 261 | WP_223499788.1 | DUF2913 family protein | - |
| KGP17_RS27890 (KGP17_27800) | 88918..89931 | + | 1014 | WP_223499789.1 | SIR2 family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|