MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 111789 bp
Accession: NZ_CP074122 Location: 1..111789 Organism: Escherichia coli strain EC16 Replicon: plasmid pEC16-2
Accession: NZ_CP074122 Location: 1..111789 Organism: Escherichia coli strain EC16 Replicon: plasmid pEC16-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KGQ53_RS23820 | 1..1056 | + | 1056 | WP_001293471.1 | replication protein RepA | - |
| KGQ53_RS23825 | 1546..1758 | - | 213 | WP_001229345.1 | hypothetical protein | - |
| KGQ53_RS23830 | 1758..2093 | - | 336 | WP_000644408.1 | hypothetical protein | - |
| KGQ53_RS23835 | 2309..2584 | - | 276 | WP_001265407.1 | hypothetical protein | - |
| KGQ53_RS23840 | 2640..3065 | - | 426 | WP_072651738.1 | hypothetical protein | - |
| KGQ53_RS23845 | 3145..5484 | - | 2340 | WP_086722025.1 | LAGLIDADG family homing endonuclease | - |
| KGQ53_RS23850 | 5487..5753 | - | 267 | WP_000920225.1 | hypothetical protein | - |
| KGQ53_RS23855 | 5753..6697 | - | 945 | WP_112890646.1 | 5'-3' exonuclease H3TH domain-containing protein | - |
| KGQ53_RS23860 | 6758..7786 | - | 1029 | WP_001717300.1 | hypothetical protein | - |
| KGQ53_RS23865 | 7903..8334 | - | 432 | WP_001090697.1 | hypothetical protein | - |
| KGQ53_RS23870 | 8767..9330 | + | 564 | WP_001240351.1 | hypothetical protein | - |
| KGQ53_RS23875 | 9660..9875 | + | 216 | WP_000066497.1 | cold shock protein CspG | - |
| KGQ53_RS23880 | 10179..13685 | - | 3507 | WP_175617226.1 | DNA polymerase III subunit alpha | - |
| KGQ53_RS23885 | 13866..15101 | - | 1236 | WP_061158074.1 | AAA family ATPase | - |
| KGQ53_RS23890 | 15197..17305 | - | 2109 | WP_212639653.1 | cobalamin biosynthesis protein CobT | - |
| KGQ53_RS23895 | 17404..17616 | - | 213 | WP_072770585.1 | hypothetical protein | - |
| KGQ53_RS23900 | 17868..18254 | + | 387 | WP_001282576.1 | transcriptional regulator | - |
| KGQ53_RS23905 | 18249..19352 | - | 1104 | WP_048959201.1 | site-specific integrase | - |
| KGQ53_RS23910 | 19526..19936 | - | 411 | WP_072644914.1 | type II toxin-antitoxin system YafO family toxin | - |
| KGQ53_RS23915 | 19946..20554 | - | 609 | WP_171949057.1 | hypothetical protein | - |
| KGQ53_RS23920 | 20650..20895 | - | 246 | WP_072644913.1 | GrxA family glutaredoxin | - |
| KGQ53_RS23925 | 21185..22006 | + | 822 | WP_072644912.1 | abortive infection system antitoxin AbiGi family protein | - |
| KGQ53_RS23930 | 22033..23244 | + | 1212 | WP_001308880.1 | hypothetical protein | - |
| KGQ53_RS23950 | 24449..24739 | - | 291 | WP_052904868.1 | hypothetical protein | - |
| KGQ53_RS23955 | 24736..24888 | - | 153 | WP_000613553.1 | hypothetical protein | - |
| KGQ53_RS23960 | 24885..25100 | - | 216 | WP_000636536.1 | hypothetical protein | - |
| KGQ53_RS23965 | 25097..26419 | - | 1323 | WP_077127605.1 | hypothetical protein | - |
| KGQ53_RS25985 | 26416..26898 | - | 483 | WP_162992118.1 | hypothetical protein | - |
| KGQ53_RS23975 | 26954..27730 | - | 777 | WP_077127606.1 | hypothetical protein | - |
| KGQ53_RS23980 | 27806..28921 | - | 1116 | WP_025670482.1 | hypothetical protein | - |
| KGQ53_RS23985 | 29069..30409 | - | 1341 | WP_000137333.1 | DnaB-like helicase C-terminal domain-containing protein | - |
| KGQ53_RS23990 | 30453..31193 | - | 741 | WP_072770589.1 | hypothetical protein | - |
| KGQ53_RS23995 | 31477..32244 | + | 768 | WP_000342417.1 | hypothetical protein | - |
| KGQ53_RS24000 | 32297..32650 | - | 354 | WP_160378290.1 | hypothetical protein | - |
| KGQ53_RS24005 | 32656..33324 | - | 669 | WP_000161228.1 | division plane positioning ATPase MipZ | - |
| KGQ53_RS24010 | 33644..33913 | + | 270 | WP_001711191.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| KGQ53_RS24015 | 33921..34442 | + | 522 | WP_052988649.1 | GNAT family N-acetyltransferase | Toxin Detail |
| KGQ53_RS24020 | 34611..34862 | - | 252 | WP_000901559.1 | hypothetical protein | - |
| KGQ53_RS24025 | 34864..35556 | - | 693 | WP_052988648.1 | hypothetical protein | - |
| KGQ53_RS24030 | 35570..35893 | - | 324 | WP_000064175.1 | hypothetical protein | - |
| KGQ53_RS24035 | 35968..36750 | - | 783 | WP_212639654.1 | receptor-recognizing protein | - |
| KGQ53_RS25990 | 36817..37218 | - | 402 | WP_171729182.1 | tail fiber domain-containing protein | - |
| KGQ53_RS25995 | 39190..41409 | - | 2220 | Protein_42 | short-chain fatty acid transporter | - |
| KGQ53_RS24050 | 41968..46695 | - | 4728 | WP_212639656.1 | phage tail protein | - |
| KGQ53_RS24055 | 46713..47306 | - | 594 | WP_001293195.1 | tail assembly protein | - |
| KGQ53_RS24060 | 47294..48091 | - | 798 | WP_001405045.1 | C40 family peptidase | - |
| KGQ53_RS24065 | 48084..48782 | - | 699 | WP_000511446.1 | phage minor tail protein L | - |
| KGQ53_RS24070 | 48865..49200 | - | 336 | WP_000442112.1 | phage tail protein | - |
| KGQ53_RS24075 | 49243..53820 | - | 4578 | WP_024175976.1 | tape measure protein | - |
| KGQ53_RS24080 | 53828..54052 | - | 225 | WP_000952686.1 | hypothetical protein | - |
| KGQ53_RS24085 | 54178..54495 | - | 318 | WP_000163861.1 | hypothetical protein | - |
| KGQ53_RS24090 | 54551..55297 | - | 747 | WP_000072377.1 | Ig domain-containing protein | - |
| KGQ53_RS24095 | 55372..55755 | - | 384 | WP_000469440.1 | minor capsid protein | - |
| KGQ53_RS24100 | 55757..56230 | - | 474 | WP_000523628.1 | hypothetical protein | - |
| KGQ53_RS24105 | 56221..56565 | - | 345 | WP_001027663.1 | hypothetical protein | - |
| KGQ53_RS24110 | 56645..57478 | - | 834 | WP_000057118.1 | hypothetical protein | - |
| KGQ53_RS24115 | 57478..57912 | - | 435 | WP_000801187.1 | hypothetical protein | - |
| KGQ53_RS24120 | 57957..58877 | - | 921 | WP_135512498.1 | Ig-like domain-containing protein | - |
| KGQ53_RS24125 | 58951..59826 | - | 876 | WP_001130339.1 | hypothetical protein | - |
| KGQ53_RS24130 | 59852..60739 | - | 888 | WP_001055285.1 | hypothetical protein | - |
| KGQ53_RS24135 | 60761..62335 | - | 1575 | WP_001717193.1 | phage portal protein | - |
| KGQ53_RS24140 | 62362..63618 | - | 1257 | WP_001007299.1 | phage terminase large subunit | - |
| KGQ53_RS24145 | 63618..64250 | - | 633 | WP_000215413.1 | hypothetical protein | - |
| KGQ53_RS24150 | 64446..64712 | - | 267 | WP_000176292.1 | hypothetical protein | - |
| KGQ53_RS24155 | 64722..65612 | - | 891 | WP_000129633.1 | hypothetical protein | - |
| KGQ53_RS24160 | 65609..66274 | - | 666 | WP_212639646.1 | ATP-binding cassette domain-containing protein | - |
| KGQ53_RS24165 | 66271..66939 | - | 669 | WP_000161986.1 | ParB/Srx family N-terminal domain-containing protein | - |
| KGQ53_RS24170 | 66939..67619 | - | 681 | WP_000382660.1 | ParB N-terminal domain-containing protein | - |
| KGQ53_RS24175 | 67702..69261 | + | 1560 | WP_212639647.1 | DEAD/DEAH box helicase | - |
| KGQ53_RS24180 | 69264..69542 | + | 279 | WP_001291061.1 | hypothetical protein | - |
| KGQ53_RS24185 | 69608..70174 | + | 567 | WP_128890896.1 | hypothetical protein | - |
| KGQ53_RS24190 | 70560..71360 | - | 801 | WP_023145146.1 | hypothetical protein | - |
| KGQ53_RS24195 | 71463..71984 | + | 522 | WP_023145147.1 | repressor of phase-1 flagellin | - |
| KGQ53_RS24200 | 72279..72929 | + | 651 | WP_024175978.1 | hypothetical protein | - |
| KGQ53_RS24205 | 72977..73207 | + | 231 | WP_023145149.1 | hypothetical protein | - |
| KGQ53_RS24210 | 73824..74306 | - | 483 | WP_072644898.1 | hypothetical protein | - |
| KGQ53_RS24215 | 74511..74792 | - | 282 | WP_001711139.1 | hypothetical protein | - |
| KGQ53_RS24220 | 75128..75502 | - | 375 | WP_001755487.1 | hypothetical protein | - |
| KGQ53_RS24225 | 75620..76015 | - | 396 | WP_072644896.1 | hypothetical protein | - |
| KGQ53_RS24230 | 76142..76453 | - | 312 | WP_000749407.1 | hypothetical protein | - |
| KGQ53_RS24235 | 76607..76936 | - | 330 | WP_212639648.1 | hypothetical protein | - |
| KGQ53_RS24240 | 78512..78910 | - | 399 | WP_032252448.1 | hypothetical protein | - |
| KGQ53_RS24245 | 79205..79447 | - | 243 | WP_061092983.1 | DUF1380 family protein | - |
| KGQ53_RS24250 | 79607..81640 | - | 2034 | WP_061092962.1 | methionine--tRNA ligase | - |
| KGQ53_RS24255 | 81798..82898 | + | 1101 | WP_000004356.1 | iron-sulfur cluster carrier protein ApbC | - |
| KGQ53_RS24260 | 82935..83324 | - | 390 | WP_000506720.1 | S24 family peptidase | - |
| KGQ53_RS24265 | 83423..83674 | - | 252 | WP_001755493.1 | DNA polymerase III subunit theta | - |
| KGQ53_RS24270 | 84033..85589 | + | 1557 | WP_212639649.1 | type I restriction-modification system subunit M | - |
| KGQ53_RS24275 | 85586..86776 | + | 1191 | WP_212639650.1 | restriction endonuclease subunit S | - |
| KGQ53_RS24280 | 86898..90014 | + | 3117 | WP_212639651.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KGQ53_RS24285 | 90073..90549 | - | 477 | WP_001090450.1 | hypothetical protein | - |
| KGQ53_RS24290 | 90653..91267 | - | 615 | WP_000467663.1 | hypothetical protein | - |
| KGQ53_RS24295 | 91606..92175 | - | 570 | WP_000335122.1 | hypothetical protein | - |
| KGQ53_RS24300 | 92315..92473 | - | 159 | WP_000893471.1 | DUF3927 family protein | - |
| KGQ53_RS24305 | 92473..92898 | - | 426 | WP_000900262.1 | tellurite/colicin resistance protein | - |
| KGQ53_RS24310 | 92992..93180 | - | 189 | WP_001104328.1 | hypothetical protein | - |
| KGQ53_RS24315 | 93190..93684 | - | 495 | WP_001348724.1 | hypothetical protein | - |
| KGQ53_RS24320 | 93833..94493 | - | 661 | Protein_97 | ribonuclease HI | - |
| KGQ53_RS24325 | 95010..95240 | - | 231 | WP_000121544.1 | hypothetical protein | - |
| KGQ53_RS24330 | 95427..96020 | - | 594 | WP_000559568.1 | phage N-6-adenine-methyltransferase | - |
| KGQ53_RS24335 | 96204..97013 | - | 810 | WP_001755504.1 | hypothetical protein | - |
| KGQ53_RS24340 | 97174..97728 | - | 555 | WP_127070536.1 | 3'-5' exonuclease | - |
| KGQ53_RS24345 | 97738..98157 | - | 420 | WP_001755506.1 | hypothetical protein | - |
| KGQ53_RS24350 | 98219..98863 | - | 645 | WP_000386470.1 | AAA family ATPase | - |
| KGQ53_RS24355 | 98863..99339 | - | 477 | WP_000781810.1 | dihydrofolate reductase | - |
| KGQ53_RS24360 | 99336..99749 | - | 414 | WP_001308886.1 | hypothetical protein | - |
| KGQ53_RS24365 | 99751..100854 | - | 1104 | WP_001755507.1 | thymidylate synthase | - |
| KGQ53_RS24370 | 101025..101894 | - | 870 | WP_001755508.1 | phosphoribosyl-ATP pyrophosphohydrolase | - |
| KGQ53_RS24375 | 101972..103114 | - | 1143 | WP_001755509.1 | class Ia ribonucleoside-diphosphate reductase subunit beta | - |
| KGQ53_RS24380 | 103215..105530 | - | 2316 | WP_024196939.1 | class 1a ribonucleoside-diphosphate reductase subunit alpha | - |
| KGQ53_RS24385 | 105604..106173 | - | 570 | WP_000037962.1 | hypothetical protein | - |
| KGQ53_RS24390 | 106183..106926 | - | 744 | WP_001755512.1 | hypothetical protein | - |
| KGQ53_RS24395 | 106916..108832 | - | 1917 | WP_212639652.1 | AAA family ATPase | - |
| KGQ53_RS26000 | 108829..109107 | - | 279 | WP_032140380.1 | hypothetical protein | - |
| KGQ53_RS24400 | 109062..110147 | - | 1086 | WP_000174803.1 | metallophosphoesterase | - |
| KGQ53_RS24405 | 110402..111046 | - | 645 | WP_000364573.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|