NZ_CP0740951..93933

MGE detailed information

MGE type: Conjugative plasmid        MGE length: 93933 bp
Accession: NZ_CP074095        Location: 1..93933         Organism: Salmonella enterica subsp. enterica serovar Typhimurium strain A_cip       Replicon: plasmid pSLT


Gene structure


The 5 kb flanking regions of this MGE are displayed.

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
KFU99_RS23460 (KFU99_23465) 94..378 + 285 WP_000477658.1 hypothetical protein -
KFU99_RS23465 (KFU99_23470) 391..546 + 156 WP_000983042.1 hypothetical protein -
KFU99_RS23470 (KFU99_23475) 668..1223 + 556 Protein_2 Phospholipase D VF
KFU99_RS23475 (KFU99_23480) 1334..1600 + 267 WP_010999936.1 replication regulatory protein RepA -
KFU99_RS23480 (KFU99_23485) 1850..1927 + 78 WP_001541552.1 RepA leader peptide Tap -
KFU99_RS23485 (KFU99_23490) 1908..2789 + 882 WP_001738692.1 incFII family plasmid replication initiator RepA -
KFU99_RS23490 (KFU99_23495) 3574..3870 + 297 WP_254888533.1 SdiA-regulated domain-containing protein -
KFU99_RS23495 (KFU99_23500) 3967..4725 - 759 WP_000417898.1 AraC family transcriptional regulator -
KFU99_RS23500 (KFU99_23505) 4992..5549 - 558 WP_000725062.1 Attachment invasion locus protein VF
KFU99_RS23505 (KFU99_23510) 5639..6538 - 900 WP_010999938.1 YjiK family protein -
KFU99_RS23510 (KFU99_23515) 6535..6681 - 147 WP_001192557.1 hypothetical protein -
KFU99_RS23515 (KFU99_23520) 6671..7324 - 654 WP_000178592.1 DsbA family protein -
KFU99_RS23520 (KFU99_23525) 7569..7919 - 351 WP_001526811.1 Transcriptional regulatory protein RcsB VF
KFU99_RS23525 (KFU99_23530) 7904..8116 - 213 WP_000004313.1 hypothetical protein VF
KFU99_RS23530 (KFU99_23535) 8548..9423 - 876 WP_010999939.1 membrane protein -
KFU99_RS23535 (KFU99_23540) 9676..10233 - 558 WP_010999940.1 membrane protein -
KFU99_RS23540 (KFU99_23545) 10248..10940 - 693 WP_001038510.1 Chaperone protein FaeE VF
KFU99_RS23545 (KFU99_23550) 10933..13341 - 2409 WP_000007893.1 Outer membrane usher protein FimD VF
KFU99_RS23550 (KFU99_23555) 13569..14087 - 519 WP_000748205.1 hypothetical protein VF
KFU99_RS23555 (KFU99_23560) 14362..14664 - 303 WP_000979451.1 Major pilu subunit operon regulatory protein PapB VF
KFU99_RS23560 (KFU99_23565) 15383..15764 + 382 Protein_20 YgiW/YdeI family stress tolerance OB fold protein -
KFU99_RS23565 (KFU99_23570) 15933..16377 + 445 Protein_21 tyrosine-type recombinase/integrase -
KFU99_RS23570 (KFU99_23575) 16636..17625 - 990 WP_001527061.1 RepB family plasmid replication initiator protein -
KFU99_RS23575 (KFU99_23580) 18119..18415 - 297 WP_001687482.1 hypothetical protein -
KFU99_RS24205 18427..18855 + 429 Protein_24 hypothetical protein -
KFU99_RS23580 (KFU99_23585) 18899..19420 - 522 WP_010999942.1 hypothetical protein -
KFU99_RS23585 (KFU99_23590) 20096..20314 + 219 WP_000813641.1 type II toxin-antitoxin system antitoxin CcdA Antitoxin Detail
KFU99_RS23590 (KFU99_23595) 20316..20621 + 306 WP_001159863.1 type II toxin-antitoxin system toxin CcdB Toxin Detail
KFU99_RS23595 (KFU99_23600) 20623..20913 + 291 WP_001266176.1 hypothetical protein -
KFU99_RS23600 (KFU99_23605) 20910..21431 + 522 WP_000198608.1 hypothetical protein -
KFU99_RS23605 (KFU99_23610) 21466..22248 + 783 WP_000082169.1 site-specific integrase -
KFU99_RS23610 (KFU99_23615) 22257..22808 + 552 WP_000545754.1 Cyclic di-GMP phosphodiesterase PdeL VF
KFU99_RS23615 (KFU99_23620) 22995..23483 + 489 WP_001075507.1 CaiF/GrlA family transcriptional regulator -
KFU99_RS23620 (KFU99_23625) 23477..23962 + 486 WP_000905606.1 membrane protein -
KFU99_RS23625 (KFU99_23630) 24239..24526 - 288 WP_071530243.1 hypothetical protein -
KFU99_RS23630 (KFU99_23635) 24682..25242 + 561 WP_000900095.1 Invasin VF
KFU99_RS23635 (KFU99_23640) 25309..25659 - 351 WP_001541541.1 IS200-IS605 family transposase ISEc46 Transposase
KFU99_RS23640 (KFU99_23645) 25716..26140 + 425 Protein_37 IS200/IS605 family transposase -
KFU99_RS23645 (KFU99_23650) 26267..26917 - 651 WP_001575489.1 SPI-2 type III secretion system effector cysteine hydrolase SpvD -
KFU99_RS23650 (KFU99_23655) 27178..27903 - 726 WP_001122242.1 MAPK phosphothreonine lyase VF
KFU99_RS23655 (KFU99_23660) 28185..29960 - 1776 WP_001676648.1 Mono(ADP-ribosyl)transferase SpvB VF
KFU99_RS23660 (KFU99_23665) 30012..30179 - 168 WP_001526987.1 hypothetical protein -
KFU99_RS23665 (KFU99_23670) 30142..30909 - 768 WP_001526990.1 virulence protein SpvA -
KFU99_RS23670 (KFU99_23675) 31083..31247 - 165 WP_001576629.1 glycoside hydrolase family protein -
KFU99_RS23675 (KFU99_23680) 31421..32314 - 894 WP_000346691.1 virulence genes transcriptional activator SpvR -
KFU99_RS23680 (KFU99_23685) 32923..33960 + 1038 WP_001121399.1 IS630 family transposase ISEc33 Transposase
KFU99_RS23685 (KFU99_23690) 34149..35174 - 1026 WP_001576625.1 ExeA family protein -
KFU99_RS23690 (KFU99_23695) 35107..36771 - 1665 WP_000098783.1 IS481 family transposase ISAzs36 Transposase
KFU99_RS23695 (KFU99_23700) 36755..37315 - 561 WP_001240331.1 Tn3 family transposase ISPsy42 Transposase
KFU99_RS23700 (KFU99_23705) 37522..38262 - 741 WP_001541566.1 carbonic anhydrase family protein -
KFU99_RS23705 (KFU99_23710) 38917..39405 - 489 WP_001135407.1 hypothetical protein -
KFU99_RS23710 (KFU99_23715) 39664..40779 + 1116 WP_001247118.1 DNA-binding protein -
KFU99_RS23715 (KFU99_23720) 40865..41281 + 417 WP_001541564.1 hypothetical protein -
KFU99_RS23720 (KFU99_23725) 41384..41800 + 417 WP_000988946.1 hypothetical protein -
KFU99_RS23725 (KFU99_23730) 41857..42458 + 602 Protein_54 DUF2913 family protein -
KFU99_RS23730 (KFU99_23735) 42455..43396 - 942 WP_000728917.1 Recombination-promoting nuclease RpnA VF
KFU99_RS23735 (KFU99_23740) 43811..45016 + 1206 WP_000427676.1 AAA family ATPase -
KFU99_RS23740 (KFU99_23745) 45016..45990 + 975 WP_000064274.1 ParB family protein -
KFU99_RS23745 (KFU99_23750) 46072..47346 - 1275 WP_000457541.1 Y-family DNA polymerase -
KFU99_RS23750 (KFU99_23755) 47346..47768 - 423 WP_000925627.1 translesion error-prone DNA polymerase V autoproteolytic subunit -
KFU99_RS23755 (KFU99_23760) 48279..48749 + 471 WP_000490265.1 hypothetical protein -
KFU99_RS23760 (KFU99_23765) 48742..49098 + 357 WP_000369839.1 hypothetical protein -
KFU99_RS24210 49036..49317 - 282 WP_146671468.1 hypothetical protein -
KFU99_RS23765 (KFU99_23770) 49480..50160 + 681 WP_000088645.1 DNA methylase -
KFU99_RS23770 (KFU99_23775) 50160..50381 + 222 WP_001109588.1 hypothetical protein -
KFU99_RS23775 (KFU99_23780) 50437..50850 + 414 WP_000990114.1 DUF1380 family protein -
KFU99_RS23780 (KFU99_23785) 50922..51686 + 765 WP_001246548.1 membrane protein -
KFU99_RS23785 (KFU99_23790) 52182..52616 + 435 WP_001200150.1 antirestriction protein -
KFU99_RS23790 (KFU99_23795) 52683..53117 + 435 WP_000274533.1 DUF1380 family protein -
KFU99_RS23795 (KFU99_23800) 53353..53676 + 324 WP_000015983.1 DNA polymerase III subunit theta -
KFU99_RS23800 (KFU99_23805) 53640..53801 + 162 WP_153810625.1 hypothetical protein -
KFU99_RS23805 (KFU99_23810) 54395..54913 + 519 WP_000741240.1 single-stranded DNA-binding protein SSB2 -
KFU99_RS23810 (KFU99_23815) 54968..55210 + 243 WP_000131520.1 DUF905 domain-containing protein -
KFU99_RS23815 (KFU99_23820) 55279..57276 + 1998 WP_000117513.1 ParB/RepB/Spo0J family partition protein -
KFU99_RS23820 (KFU99_23825) 57316..57750 + 435 WP_010999943.1 conjugation system SOS inhibitor PsiB -
KFU99_RS23825 (KFU99_23830) 57747..58484 + 738 WP_000581933.1 plasmid SOS inhibition protein A -
KFU99_RS24265 58519..58647 + 129 WP_000372429.1 hypothetical protein -
KFU99_RS23830 (KFU99_23835) 58733..58891 + 159 WP_001704449.1 hypothetical protein -
KFU99_RS23835 (KFU99_23840) 58994..59812 + 819 Protein_78 DUF932 domain-containing protein -
KFU99_RS23840 (KFU99_23845) 60123..60593 - 471 WP_001526856.1 hypothetical protein VF
KFU99_RS23845 (KFU99_23850) 61008..61388 + 381 WP_001151546.1 conjugal transfer relaxosome DNA-binding protein TraM -
KFU99_RS23850 (KFU99_23855) 61581..62267 + 687 WP_000336297.1 PAS domain-containing protein -
KFU99_RS23855 (KFU99_23860) 62361..62588 + 228 WP_001676655.1 conjugal transfer relaxosome protein TraY -
KFU99_RS23860 (KFU99_23865) 62630..62992 + 363 WP_001274201.1 type IV conjugative transfer system pilin TraA -
KFU99_RS23865 (KFU99_23870) 63007..63318 + 312 WP_000012129.1 type IV conjugative transfer system protein TraL -
KFU99_RS23870 (KFU99_23875) 63340..63906 + 567 WP_000399769.1 type IV conjugative transfer system protein TraE -
KFU99_RS23875 (KFU99_23880) 63893..64633 + 741 WP_001230719.1 type-F conjugative transfer system secretin TraK -
KFU99_RS23880 (KFU99_23885) 64633..66054 + 1422 WP_000146700.1 F-type conjugal transfer pilus assembly protein TraB -
KFU99_RS23885 (KFU99_23890) 66044..66640 + 597 WP_000527896.1 conjugal transfer pilus-stabilizing protein TraP -
KFU99_RS23890 (KFU99_23895) 66618..66863 + 246 WP_010999944.1 DUF2689 domain-containing protein -
KFU99_RS23895 (KFU99_23900) 66860..67375 + 516 WP_001079995.1 type IV conjugative transfer system lipoprotein TraV -
KFU99_RS23900 (KFU99_23905) 67510..67731 + 222 WP_001278699.1 conjugal transfer protein TraR -
KFU99_RS23905 (KFU99_23910) 67724..68191 + 468 WP_000549562.1 hypothetical protein -
KFU99_RS23910 (KFU99_23915) 68308..68571 + 264 WP_001239256.1 hypothetical protein -
KFU99_RS23915 (KFU99_23920) 68587..71235 + 2649 WP_000793310.1 type IV secretion system protein TraC -
KFU99_RS23920 (KFU99_23925) 71210..71596 + 387 WP_000105164.1 type-F conjugative transfer system protein TrbI -
KFU99_RS23925 (KFU99_23930) 71593..72225 + 633 WP_000871995.1 type-F conjugative transfer system protein TraW -
KFU99_RS23930 (KFU99_23935) 72222..73214 + 993 WP_000833320.1 conjugal transfer pilus assembly protein TraU -
KFU99_RS23935 (KFU99_23940) 73233..73541 + 309 WP_010999945.1 hypothetical protein -
KFU99_RS23940 (KFU99_23945) 73526..74164 + 639 WP_000554823.1 type-F conjugative transfer system pilin assembly protein TrbC -
KFU99_RS23945 (KFU99_23950) 74201..74620 + 420 WP_001229397.1 HNH endonuclease signature motif containing protein -
KFU99_RS23950 (KFU99_23955) 74617..76443 + 1827 WP_000827528.1 type-F conjugative transfer system mating-pair stabilization protein TraN -
KFU99_RS23955 (KFU99_23960) 76454..76669 + 216 WP_000700023.1 conjugal transfer protein TrbE -
KFU99_RS23960 (KFU99_23965) 76681..77430 + 750 WP_001226854.1 type-F conjugative transfer system pilin assembly protein TraF -
KFU99_RS23965 (KFU99_23970) 77644..77937 + 294 WP_001233881.1 type-F conjugative transfer system pilin chaperone TraQ -
KFU99_RS23970 (KFU99_23975) 77924..78472 + 549 WP_000055840.1 type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB -
KFU99_RS23975 (KFU99_23980) 78462..79844 + 1383 WP_001161719.1 conjugal transfer pilus assembly protein TraH -
KFU99_RS23980 (KFU99_23985) 79841..82663 + 2823 WP_001007086.1 conjugal transfer mating-pair stabilization protein TraG -
KFU99_RS23985 (KFU99_23990) 82679..83173 + 495 WP_010999946.1 entry exclusion protein -
KFU99_RS23990 (KFU99_23995) 83209..83940 + 732 WP_000782438.1 conjugal transfer complement resistance protein TraT -
KFU99_RS23995 (KFU99_24000) 84317..86560 + 2244 WP_000009320.1 type IV conjugative transfer system coupling protein TraD -
KFU99_RS24000 (KFU99_24005) 86569..86967 - 399 WP_000911322.1 type II toxin-antitoxin system VapC family toxin -
KFU99_RS24005 (KFU99_24010) 86967..87194 - 228 WP_000450265.1 toxin-antitoxin system antitoxin VapB -
KFU99_RS24010 (KFU99_24015) 87276..92534 + 5259 WP_000986921.1 Multifunctional conjugation protein TraI Relaxase
KFU99_RS24015 (KFU99_24020) 92554..93294 + 741 WP_000177629.1 conjugal transfer pilus acetylase TraX -
KFU99_RS24020 (KFU99_24025) 93349..93912 + 564 WP_000139307.1 fertility inhibition protein FinO -

Similar MGE(s)


Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.

Detail Organism MGE type Related TA Genome accession Coordinates Mash
distance