MGE detailed information
MGE type: Prophage MGE length: 62876 bp
Accession: NZ_CP074028 Location: 566375..629250 Organism: Escherichia coli strain PK13 Replicon: chromosome
Accession: NZ_CP074028 Location: 566375..629250 Organism: Escherichia coli strain PK13 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU76_RS02820 (561626) | 561626..562336 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KFU76_RS02825 (562339) | 562339..562899 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KFU76_RS02830 (562934) | 562934..563275 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KFU76_RS02835 (563410) | 563410..563736 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KFU76_RS02840 (563942) | 563942..565156 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KFU76_RS02845 (565168) | 565168..566187 | + | 1020 | WP_000836057.1 | Zn-dependent oxidoreductase | - |
| KFU76_RS02850 (566375) | 566375..567655 | - | 1281 | WP_000876979.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KFU76_RS02855 (567690) | 567690..567941 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KFU76_RS02860 (568014) | 568014..570485 | - | 2472 | WP_001515375.1 | exonuclease | - |
| KFU76_RS02865 (570579) | 570579..570770 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KFU76_RS02870 (570767) | 570767..570955 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KFU76_RS02875 (571523) | 571523..571741 | - | 219 | WP_001171952.1 | protein YdfC | - |
| KFU76_RS02880 (571771) | 571771..571899 | - | 129 | WP_000344930.1 | protein YdfB | - |
| KFU76_RS02885 (571901) | 571901..572056 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| KFU76_RS02890 (572225) | 572225..572632 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| KFU76_RS02895 (572714) | 572714..572941 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| KFU76_RS02900 (572925) | 572925..573446 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| KFU76_RS02905 (573427) | 573427..574392 | + | 966 | WP_000054514.1 | hypothetical protein | - |
| KFU76_RS02910 (574433) | 574433..574855 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KFU76_RS02915 (574852) | 574852..575341 | + | 490 | Protein_571 | class I SAM-dependent methyltransferase | - |
| KFU76_RS02920 (575872) | 575872..576104 | + | 233 | Protein_572 | hypothetical protein | - |
| KFU76_RS02925 (576893) | 576893..577942 | + | 1050 | Protein_573 | ISNCY family transposase ISCARN112 | Transposase |
| KFU76_RS02930 (578063) | 578063..578212 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KFU76_RS02935 (578649) | 578649..578981 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KFU76_RS02940 (579184) | 579184..579489 | - | 306 | WP_071593935.1 | protein YdfV | - |
| KFU76_RS02945 (579514) | 579514..579753 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFU76_RS02950 (579753) | 579753..580040 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFU76_RS02955 (580112) | 580112..580267 | + | 156 | WP_001406737.1 | type I toxin-antitoxin system toxin HokD | - |
| KFU76_RS02960 (580558) | 580558..581720 | + | 1163 | WP_085947771.1 | IS3 family transposase IS3 | Transposase |
| KFU76_RS02965 (581755) | 581755..581997 | + | 243 | WP_106661496.1 | protein Rem | - |
| KFU76_RS02970 (582064) | 582064..582342 | + | 279 | WP_001515373.1 | hypothetical protein | - |
| KFU76_RS02975 (582344) | 582344..583393 | + | 1050 | WP_106661497.1 | DUF968 domain-containing protein | - |
| KFU76_RS02980 (583411) | 583411..583788 | + | 378 | WP_001204787.1 | antiterminator Q family protein | - |
| KFU76_RS02985 (583944) | 583944..584468 | - | 525 | WP_000780584.1 | lipocalin family protein | - |
| KFU76_RS02990 (584661) | 584661..585620 | + | 960 | WP_000592549.1 | DUF523 and DUF1722 domain-containing protein | - |
| KFU76_RS02995 (586027) | 586027..586740 | + | 714 | WP_001146314.1 | HTH-type transcriptional regulator GadW | VF |
| KFU76_RS03000 (586931) | 586931..587146 | + | 216 | WP_001515371.1 | phage lysis protein EssD | - |
| KFU76_RS03005 (587151) | 587151..587465 | + | 315 | WP_001515370.1 | YdfR family protein | - |
| KFU76_RS03010 (587521) | 587521..588054 | + | 534 | WP_001515369.1 | lysozyme | - |
| KFU76_RS03015 (588051) | 588051..588548 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KFU76_RS03020 (588911) | 588911..589123 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KFU76_RS03025 (589134) | 589134..589322 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KFU76_RS03030 (589325) | 589325..589390 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KFU76_RS03035 (589469) | 589469..589624 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KFU76_RS03040 (589796) | 589796..589969 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KFU76_RS03045 (590121) | 590121..590531 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KFU76_RS03050 (590589) | 590589..590822 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KFU76_RS03055 (591211) | 591211..591756 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KFU76_RS03060 (591731) | 591731..593656 | + | 1926 | WP_001027297.1 | phage terminase large subunit family protein | - |
| KFU76_RS03065 (593653) | 593653..593859 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KFU76_RS03070 (593856) | 593856..594689 | + | 834 | Protein_602 | phage portal protein | - |
| KFU76_RS03075 (594886) | 594886..596127 | + | 1242 | WP_000963723.1 | Prophage integrase IntA ; Integrase | Integrase |
| KFU76_RS03080 (596129) | 596129..596386 | + | 258 | WP_001029461.1 | AlpA family phage regulatory protein | - |
| KFU76_RS03085 (596443) | 596443..597021 | + | 579 | WP_001038675.1 | BRO family protein | - |
| KFU76_RS03090 (597355) | 597355..597660 | - | 306 | WP_000179580.1 | YlcI/YnfO family protein | - |
| KFU76_RS03095 (597851) | 597851..598048 | + | 198 | WP_001390072.1 | host cell division inhibitor Icd-like protein | - |
| KFU76_RS03100 (598041) | 598041..598175 | + | 135 | Protein_608 | hypothetical protein | - |
| KFU76_RS03105 (598229) | 598229..598926 | + | 698 | WP_223367350.1 | IS1 family transposase | - |
| KFU76_RS03110 (599002) | 599002..599193 | + | 192 | WP_001156310.1 | hypothetical protein | - |
| KFU76_RS03115 (599194) | 599194..599415 | + | 222 | WP_001091146.1 | hypothetical protein | - |
| KFU76_RS03120 (599433) | 599433..599732 | + | 300 | WP_065203512.1 | DUF4222 domain-containing protein | - |
| KFU76_RS03125 (599729) | 599729..601483 | + | 1755 | WP_000761841.1 | DUF5906 domain-containing protein | - |
| KFU76_RS03130 (601831) | 601831..602082 | + | 252 | WP_000161636.1 | hypothetical protein | - |
| KFU76_RS03135 (602079) | 602079..602501 | + | 423 | WP_000126640.1 | single-stranded DNA-binding protein | - |
| KFU76_RS03140 (602719) | 602719..603759 | + | 1041 | WP_000228106.1 | major capsid protein | - |
| KFU76_RS03145 (603769) | 603769..604110 | + | 342 | WP_000190771.1 | head decoration protein | - |
| KFU76_RS03150 (604122) | 604122..604505 | + | 384 | WP_001179424.1 | AlpA family phage regulatory protein | - |
| KFU76_RS03155 (604707) | 604707..605249 | + | 543 | WP_000835282.1 | terminase small subunit | - |
| KFU76_RS03160 (605261) | 605261..605542 | + | 282 | WP_000140265.1 | hypothetical protein | - |
| KFU76_RS03165 (606349) | 606349..607131 | + | 783 | Protein_621 | phage portal protein | - |
| KFU76_RS03170 (607112) | 607112..608431 | + | 1320 | WP_106661532.1 | S49 family peptidase | - |
| KFU76_RS03175 (608441) | 608441..608773 | + | 333 | WP_001338090.1 | head decoration protein | - |
| KFU76_RS03180 (608829) | 608829..609854 | + | 1026 | WP_021514934.1 | major capsid protein | - |
| KFU76_RS03185 (609896) | 609896..610291 | + | 396 | WP_106661533.1 | DNA-packaging protein FI | - |
| KFU76_RS03190 (610303) | 610303..610656 | + | 354 | WP_000752960.1 | head-tail joining protein | - |
| KFU76_RS03195 (610668) | 610668..611246 | + | 579 | WP_001398561.1 | phage tail protein | - |
| KFU76_RS03200 (611243) | 611243..611638 | + | 396 | WP_106661534.1 | phage minor tail U family protein | - |
| KFU76_RS03205 (611646) | 611646..612386 | + | 741 | WP_001543784.1 | phage tail protein | - |
| KFU76_RS03210 (612402) | 612402..612824 | + | 423 | WP_000479135.1 | phage minor tail protein G | - |
| KFU76_RS03215 (612806) | 612806..613240 | + | 435 | WP_000459471.1 | phage tail assembly protein T | - |
| KFU76_RS03220 (613233) | 613233..615812 | + | 2580 | WP_000840337.1 | phage tail tape measure protein | - |
| KFU76_RS03225 (615809) | 615809..616138 | + | 330 | WP_000847331.1 | phage tail protein | - |
| KFU76_RS03230 (616138) | 616138..616836 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| KFU76_RS03235 (616842) | 616842..617585 | + | 744 | WP_106661535.1 | C40 family peptidase | - |
| KFU76_RS03240 (617582) | 617582..618154 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| KFU76_RS03245 (618215) | 618215..621613 | + | 3399 | WP_106661536.1 | host specificity protein J | - |
| KFU76_RS03250 (621680) | 621680..622279 | + | 600 | WP_001230352.1 | Outer membrane protein X | VF |
| KFU76_RS03255 (622344) | 622344..625367 | + | 3024 | WP_024195673.1 | phage tail protein | - |
| KFU76_RS03260 (625367) | 625367..625942 | + | 576 | WP_000885587.1 | tail fiber assembly protein | - |
| KFU76_RS03265 (626040) | 626040..626630 | - | 591 | WP_032187390.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFU76_RS03270 (626947) | 626947..627180 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KFU76_RS03275 (627249) | 627249..627362 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KFU76_RS03280 (627967) | 627967..629250 | + | 1284 | Protein_644 | MHS family MFS transporter YdfJ | - |
| KFU76_RS03285 (629339) | 629339..630799 | + | 1461 | WP_000527751.1 | mannitol dehydrogenase family protein | - |
| KFU76_RS03290 (630835) | 630835..631038 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KFU76_RS03295 (631216) | 631216..631902 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KFU76_RS03300 (631991) | 631991..632737 | - | 747 | WP_000636575.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|