MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 54950 bp
Accession: NZ_CP074022 Location: 1..54950 Organism: Escherichia coli strain PM22 Replicon: plasmid pYLPM22c
Accession: NZ_CP074022 Location: 1..54950 Organism: Escherichia coli strain PM22 Replicon: plasmid pYLPM22c
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU87_RS24225 (KFU87_24070) | 453..749 | + | 297 | WP_000916182.1 | TrbC/VirB2 family protein | - |
| KFU87_RS24230 | 768..956 | + | 189 | Protein_2 | Type IV secretion system protein virB4 | VF |
| KFU87_RS24235 (KFU87_24075) | 1527..3521 | + | 1995 | WP_072107035.1 | Type IV secretion system protein virB4 | VF |
| KFU87_RS24240 (KFU87_24080) | 3532..4281 | + | 750 | WP_000744202.1 | type IV secretion system protein | - |
| KFU87_RS24245 (KFU87_24085) | 4296..4580 | + | 285 | WP_000748128.1 | EexN family lipoprotein | - |
| KFU87_RS24250 (KFU87_24090) | 4592..5653 | + | 1062 | WP_000796673.1 | hypothetical protein | VF |
| KFU87_RS24255 | 5780..5908 | + | 129 | WP_001328099.1 | hypothetical protein | - |
| KFU87_RS24260 (KFU87_24095) | 5898..6611 | + | 714 | WP_187211378.1 | type IV secretion system protein | - |
| KFU87_RS24265 (KFU87_24100) | 6616..7545 | + | 930 | WP_000783379.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| KFU87_RS24270 (KFU87_24105) | 7542..8747 | + | 1206 | WP_000139139.1 | Type IV secretion system protein virB10 | VF |
| KFU87_RS24275 (KFU87_24110) | 8749..9780 | + | 1032 | WP_001058464.1 | Type IV secretion system protein PtlH | VF |
| KFU87_RS24280 (KFU87_24115) | 9783..11618 | + | 1836 | WP_000053817.1 | type IV secretory system conjugative DNA transfer family protein | - |
| KFU87_RS24285 (KFU87_24120) | 11615..12028 | + | 414 | WP_000722602.1 | cag pathogenicity island Cag12 family protein | - |
| KFU87_RS24290 (KFU87_24125) | 12025..12327 | + | 303 | WP_000717625.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KFU87_RS24295 (KFU87_24130) | 12442..13365 | - | 924 | WP_000902513.1 | SMEK domain-containing protein | - |
| KFU87_RS24300 (KFU87_24135) | 13501..15654 | + | 2154 | WP_012291470.1 | type IA DNA topoisomerase | - |
| KFU87_RS24305 (KFU87_24140) | 15651..15857 | + | 207 | WP_000850859.1 | hemolysin expression modulator Hha | - |
| KFU87_RS24310 (KFU87_24145) | 15873..16307 | + | 435 | WP_001293129.1 | H-NS family nucleoid-associated regulatory protein | - |
| KFU87_RS24315 (KFU87_24150) | 16576..17256 | - | 681 | WP_001618653.1 | EAL domain-containing protein | - |
| KFU87_RS24320 (KFU87_24155) | 17503..18207 | + | 705 | WP_000017205.1 | helix-turn-helix domain-containing protein | - |
| KFU87_RS24325 (KFU87_24160) | 18425..19587 | + | 1163 | WP_148713280.1 | IS3 family transposase IS3 | Transposase |
| KFU87_RS24330 (KFU87_24165) | 19618..19728 | - | 111 | Protein_22 | IS3 family transposase ISEhe3 | Transposase |
| KFU87_RS24335 (KFU87_24170) | 19926..24002 | + | 4077 | WP_063073396.1 | Serine protease SepA autotransporter | VF |
| KFU87_RS24340 (KFU87_24175) | 24180..24869 | - | 690 | Protein_24 | IS3 family transposase ISEhe3 | Transposase |
| KFU87_RS24345 (KFU87_24180) | 24904..25083 | - | 180 | Protein_25 | IS66 family transposase | - |
| KFU87_RS24350 (KFU87_24185) | 25150..26312 | + | 1163 | WP_257182352.1 | IS3 family transposase IS3 | Transposase |
| KFU87_RS24355 (KFU87_24190) | 26787..26966 | + | 180 | WP_000347021.1 | hypothetical protein | - |
| KFU87_RS24360 (KFU87_24195) | 27353..29254 | - | 1902 | WP_000407090.1 | AAA family ATPase | - |
| KFU87_RS24365 (KFU87_24200) | 29360..29869 | - | 510 | WP_000190050.1 | hypothetical protein | - |
| KFU87_RS24370 (KFU87_24205) | 29953..30291 | - | 339 | WP_001151651.1 | hypothetical protein | - |
| KFU87_RS24375 (KFU87_24215) | 31123..34128 | - | 3006 | WP_257182351.1 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KFU87_RS24380 (KFU87_24220) | 34292..34849 | + | 558 | WP_001235713.1 | Tn3 family transposase TnpR_Tn3 | Transposase |
| KFU87_RS24385 (KFU87_24225) | 35032..35892 | + | 861 | WP_000027057.1 | Beta-lactamase TEM | ARG |
| KFU87_RS24390 (KFU87_24230) | 36169..37746 | - | 1578 | WP_001323889.1 | Aerotaxis receptor | VF |
| KFU87_RS24395 (KFU87_24235) | 38056..38616 | + | 561 | WP_001161490.1 | Tn3 family transposase TnpR_TnAs1 | Transposase |
| KFU87_RS24400 (KFU87_24240) | 38620..41586 | + | 2967 | WP_001138014.1 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU87_RS24405 (KFU87_24245) | 42713..42796 | + | 84 | WP_000565612.1 | damage-inducible type I toxin DinQ | - |
| KFU87_RS24410 (KFU87_24250) | 42951..43595 | - | 645 | WP_000203396.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KFU87_RS24415 (KFU87_24255) | 43976..44638 | + | 663 | WP_000516401.1 | division plane positioning ATPase MipZ | - |
| KFU87_RS24420 (KFU87_24260) | 44736..45017 | + | 282 | WP_001185482.1 | hypothetical protein | - |
| KFU87_RS24425 (KFU87_24265) | 45042..46019 | + | 978 | WP_001269910.1 | hypothetical protein | - |
| KFU87_RS24430 (KFU87_24270) | 46016..46372 | - | 357 | WP_000456533.1 | DNA distortion polypeptide 3 | - |
| KFU87_RS24435 (KFU87_24275) | 46509..46955 | - | 447 | WP_001074386.1 | hypothetical protein | - |
| KFU87_RS24440 (KFU87_24280) | 46995..47831 | - | 837 | WP_024198970.1 | replication initiation protein | - |
| KFU87_RS24445 (KFU87_24285) | 49065..49316 | + | 252 | WP_000121743.1 | plasmid stabilization protein | Antitoxin Detail |
| KFU87_RS24450 (KFU87_24290) | 49306..49587 | + | 282 | WP_000220560.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KFU87_RS24455 (KFU87_24295) | 49733..50056 | + | 324 | WP_001181907.1 | hypothetical protein | - |
| KFU87_RS24460 (KFU87_24300) | 50101..50346 | + | 246 | WP_000356546.1 | hypothetical protein | - |
| KFU87_RS24465 (KFU87_24305) | 50336..50551 | + | 216 | WP_001180116.1 | hypothetical protein | - |
| KFU87_RS24470 (KFU87_24310) | 50644..50973 | + | 330 | WP_024216086.1 | hypothetical protein | - |
| KFU87_RS24475 (KFU87_24315) | 51016..51195 | + | 180 | WP_000439078.1 | hypothetical protein | - |
| KFU87_RS24480 (KFU87_24320) | 51265..51414 | + | 150 | WP_000003878.1 | hypothetical protein | - |
| KFU87_RS24485 (KFU87_24325) | 51427..51699 | + | 273 | WP_000160399.1 | hypothetical protein | - |
| KFU87_RS24490 (KFU87_24335) | 52025..52570 | + | 546 | WP_000757693.1 | DNA distortion polypeptide 1 | - |
| KFU87_RS24495 (KFU87_24340) | 52573..53739 | + | 1167 | WP_000539533.1 | hypothetical protein | Relaxase |
| KFU87_RS24500 (KFU87_24345) | 54085..54603 | + | 519 | WP_001446885.1 | transcription termination/antitermination NusG family protein | - |
| KFU87_RS24505 (KFU87_24350) | 54533..54745 | + | 213 | WP_000125172.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|