MGE detailed information
MGE type: Conjugative plasmid MGE length: 88082 bp
Accession: NZ_CP074021 Location: 1..88082 Organism: Escherichia coli strain PM22 Replicon: plasmid pYLPM22b
Accession: NZ_CP074021 Location: 1..88082 Organism: Escherichia coli strain PM22 Replicon: plasmid pYLPM22b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU87_RS23735 (1) | 1..1032 | + | 1032 | WP_048257187.1 | plasmid replication initiator RepA | - |
| KFU87_RS23740 (2101) | 2101..2610 | - | 510 | WP_000045394.1 | hypothetical protein | - |
| KFU87_RS23745 (2666) | 2666..3268 | - | 603 | WP_048257190.1 | ProQ/FINO family protein | - |
| KFU87_RS23750 (3622) | 3622..4968 | + | 1347 | WP_001132033.1 | protein YagA | - |
| KFU87_RS23755 (5247) | 5247..7127 | + | 1881 | WP_001283344.1 | colicin Ia central receptor-binding domain-containing protein | - |
| KFU87_RS23760 (7149) | 7149..7484 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| KFU87_RS23765 (7613) | 7613..7960 | + | 348 | WP_016231295.1 | DUF6404 family protein | - |
| KFU87_RS23770 (7980) | 7980..8570 | - | 591 | WP_024227072.1 | hypothetical protein | - |
| KFU87_RS23775 (8570) | 8570..8827 | - | 258 | WP_000371885.1 | hypothetical protein | - |
| KFU87_RS23780 (9396) | 9396..9809 | + | 414 | WP_000465036.1 | hypothetical protein | - |
| KFU87_RS23785 (9811) | 9811..10590 | + | 780 | WP_050197978.1 | site-specific integrase | - |
| KFU87_RS23790 (10770) | 10770..11414 | + | 645 | WP_001144036.1 | ParA family protein | - |
| KFU87_RS23795 (11501) | 11501..11809 | + | 309 | WP_000030199.1 | hypothetical protein | - |
| KFU87_RS23800 (12223) | 12223..13203 | + | 981 | WP_000688514.1 | plasmid segregation protein ParM | - |
| KFU87_RS23805 (13196) | 13196..13612 | + | 417 | WP_001278818.1 | plasmid partitioning/stability family protein | - |
| KFU87_RS23810 (13614) | 13614..14888 | - | 1275 | WP_000457524.1 | Y-family DNA polymerase | - |
| KFU87_RS23815 (14888) | 14888..15325 | - | 438 | WP_000109071.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KFU87_RS23820 (15322) | 15322..15570 | - | 249 | WP_000618110.1 | DinI-like family protein | - |
| KFU87_RS23825 (15988) | 15988..16890 | + | 903 | WP_126122062.1 | DUF1281 domain-containing protein | - |
| KFU87_RS23830 (16887) | 16887..17198 | + | 312 | WP_032143956.1 | hypothetical protein | - |
| KFU87_RS23835 (17274) | 17274..17957 | + | 684 | WP_001474699.1 | DNA methylase | - |
| KFU87_RS23840 (17958) | 17958..18179 | + | 222 | WP_001104879.1 | hypothetical protein | - |
| KFU87_RS23845 (18160) | 18160..18627 | + | 468 | WP_223230041.1 | DUF1380 family protein | - |
| KFU87_RS23850 (18672) | 18672..19442 | + | 771 | WP_001006206.1 | hypothetical protein | - |
| KFU87_RS23855 (19861) | 19861..20286 | + | 426 | WP_001198928.1 | antirestriction protein | - |
| KFU87_RS23860 (20333) | 20333..20755 | + | 423 | WP_016231291.1 | DUF1380 family protein | - |
| KFU87_RS23865 (20752) | 20752..20943 | + | 192 | WP_001027495.1 | hypothetical protein | - |
| KFU87_RS23870 (21015) | 21015..21362 | + | 348 | WP_001303314.1 | hypothetical protein | - |
| KFU87_RS23875 (21714) | 21714..22241 | + | 528 | WP_001276116.1 | single-stranded DNA-binding protein | - |
| KFU87_RS23880 (22299) | 22299..22532 | + | 234 | WP_000006012.1 | DUF905 family protein | - |
| KFU87_RS23885 (22591) | 22591..24549 | + | 1959 | WP_042004724.1 | ParB/RepB/Spo0J family partition protein | - |
| KFU87_RS23890 (24604) | 24604..25038 | + | 435 | WP_000845897.1 | conjugation system SOS inhibitor PsiB | - |
| KFU87_RS23895 (25035) | 25035..25754 | + | 720 | WP_001276260.1 | plasmid SOS inhibition protein A | - |
| KFU87_RS23900 (25751) | 25751..26347 | + | 597 | WP_024227064.1 | hypothetical protein | - |
| KFU87_RS23905 (26810) | 26810..27310 | + | 501 | WP_000117627.1 | antirestriction protein ArdA | - |
| KFU87_RS23910 (28039) | 28039..28473 | + | 435 | WP_000218863.1 | hypothetical protein | - |
| KFU87_RS23915 (28567) | 28567..28833 | + | 267 | WP_001247862.1 | hypothetical protein | - |
| KFU87_RS23920 (28898) | 28898..29812 | + | 915 | WP_000038334.1 | Recombination-promoting nuclease RpnA | VF |
| KFU87_RS23925 (29812) | 29812..30057 | + | 246 | WP_257182349.1 | hypothetical protein | - |
| KFU87_RS23930 (30088) | 30088..30339 | - | 252 | WP_000148285.1 | helix-turn-helix transcriptional regulator | - |
| KFU87_RS23935 (30919) | 30919..31767 | + | 849 | WP_024227041.1 | DUF4942 domain-containing protein | - |
| KFU87_RS23940 (31853) | 31853..32188 | - | 336 | WP_024227040.1 | hypothetical protein | - |
| KFU87_RS23945 (32421) | 32421..32753 | + | 333 | WP_001281051.1 | plasmid mobilization protein MobA | - |
| KFU87_RS23950 (32764) | 32764..35463 | + | 2700 | WP_021520371.1 | Protein TraI | Relaxase |
| KFU87_RS23955 (35500) | 35500..37791 | - | 2292 | WP_257182350.1 | F-type conjugative transfer protein TrbC | - |
| KFU87_RS23960 (37784) | 37784..38854 | - | 1071 | WP_000151583.1 | IncI1-type conjugal transfer protein TrbB | - |
| KFU87_RS23965 (38873) | 38873..40081 | - | 1209 | WP_001383960.1 | IncI1-type conjugal transfer protein TrbA | - |
| KFU87_RS23970 (40299) | 40299..41252 | - | 954 | WP_021513958.1 | hypothetical protein | - |
| - (41446) | 41446..41501 | - | 56 | NuclAT_1 | - | - |
| - (41446) | 41446..41501 | - | 56 | NuclAT_1 | - | - |
| - (41446) | 41446..41501 | - | 56 | NuclAT_1 | - | - |
| - (41446) | 41446..41501 | - | 56 | NuclAT_1 | - | - |
| - (41742) | 41742..41799 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (41742) | 41742..41799 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (41742) | 41742..41799 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| - (41742) | 41742..41799 | - | 58 | NuclAT_0 | - | Antitoxin Detail |
| KFU87_RS23975 (41854) | 41854..42006 | + | 153 | WP_001331364.1 | Hok/Gef family protein | Toxin Detail |
| KFU87_RS23980 (42078) | 42078..42329 | - | 252 | WP_001291964.1 | hypothetical protein | - |
| KFU87_RS23985 (42691) | 42691..42923 | + | 233 | Protein_50 | hypothetical protein | - |
| KFU87_RS23990 (42988) | 42988..43164 | - | 177 | WP_001054898.1 | hypothetical protein | - |
| KFU87_RS23995 (43556) | 43556..43765 | + | 210 | WP_000062603.1 | HEAT repeat domain-containing protein | - |
| KFU87_RS24000 (43837) | 43837..44487 | - | 651 | WP_001178506.1 | plasmid IncI1-type surface exclusion protein ExcA | - |
| KFU87_RS24005 (44561) | 44561..46729 | - | 2169 | WP_000698357.1 | DotA/TraY family protein | - |
| KFU87_RS24010 (46826) | 46826..47410 | - | 585 | WP_001037987.1 | IncI1-type conjugal transfer protein TraX | - |
| KFU87_RS24015 (47439) | 47439..48641 | - | 1203 | WP_042004725.1 | IncI1-type conjugal transfer protein TraW | - |
| KFU87_RS24020 (48608) | 48608..49222 | - | 615 | WP_000337399.1 | IncI1-type conjugal transfer protein TraV | - |
| KFU87_RS24025 (49222) | 49222..52266 | - | 3045 | WP_001024789.1 | IncI1-type conjugal transfer protein TraU | - |
| KFU87_RS24030 (52356) | 52356..53156 | - | 801 | WP_001164784.1 | IncI1-type conjugal transfer protein TraT | - |
| KFU87_RS24035 (53140) | 53140..53328 | - | 189 | WP_001277253.1 | putative conjugal transfer protein TraS | - |
| KFU87_RS24040 (53392) | 53392..53796 | - | 405 | WP_000086965.1 | IncI1-type conjugal transfer protein TraR | - |
| KFU87_RS24045 (53847) | 53847..54374 | - | 528 | WP_001055569.1 | conjugal transfer protein TraQ | - |
| KFU87_RS24050 (54374) | 54374..55078 | - | 705 | WP_000801920.1 | IncI1-type conjugal transfer protein TraP | - |
| KFU87_RS24055 (55078) | 55078..56367 | - | 1290 | WP_042004726.1 | conjugal transfer protein TraO | - |
| KFU87_RS24060 (56370) | 56370..57353 | - | 984 | WP_001191877.1 | hypothetical protein | VF |
| KFU87_RS24065 (57364) | 57364..58056 | - | 693 | WP_000138550.1 | DotI/IcmL family type IV secretion protein | - |
| KFU87_RS24070 (58053) | 58053..58400 | - | 348 | WP_001055900.1 | conjugal transfer protein | - |
| KFU87_RS24075 (58418) | 58418..62185 | - | 3768 | WP_001141527.1 | DUF5710 domain-containing protein | - |
| KFU87_RS24080 (62275) | 62275..62826 | - | 552 | WP_000014583.1 | Phospholipase D | VF |
| KFU87_RS24085 (62841) | 62841..63131 | - | 291 | WP_001299214.1 | hypothetical protein | - |
| KFU87_RS24090 (63128) | 63128..64276 | - | 1149 | WP_001024972.1 | putative protein YggR | VF |
| KFU87_RS24095 (64273) | 64273..65091 | - | 819 | WP_000646098.1 | hypothetical protein | VF |
| KFU87_RS24100 (65088) | 65088..65546 | - | 459 | WP_001079808.1 | hypothetical protein | VF |
| KFU87_RS24105 (65940) | 65940..66524 | - | 585 | WP_000977522.1 | histidine phosphatase family protein | - |
| KFU87_RS24110 (66584) | 66584..67786 | - | 1203 | WP_000976353.1 | conjugal transfer protein TraF | - |
| KFU87_RS24115 (67872) | 67872..68696 | - | 825 | WP_001238932.1 | conjugal transfer protein TraE | - |
| KFU87_RS24120 (68847) | 68847..70001 | - | 1155 | WP_001139955.1 | site-specific integrase | - |
| KFU87_RS24125 (71522) | 71522..71770 | + | 249 | WP_001349157.1 | hypothetical protein | - |
| KFU87_RS24130 (71767) | 71767..73059 | - | 1293 | WP_001417545.1 | hypothetical protein | VF |
| KFU87_RS24135 (73059) | 73059..73715 | - | 657 | WP_001193553.1 | hypothetical protein | VF |
| KFU87_RS24140 (73700) | 73700..74260 | - | 561 | WP_000014116.1 | hypothetical protein | VF |
| KFU87_RS24145 (74270) | 74270..74884 | - | 615 | WP_001542527.1 | hypothetical protein | VF |
| KFU87_RS24150 (74902) | 74902..75999 | - | 1098 | WP_001492931.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KFU87_RS24155 (76012) | 76012..77565 | - | 1554 | WP_001492932.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KFU87_RS24160 (77576) | 77576..78028 | - | 453 | WP_001247870.1 | hypothetical protein | VF |
| KFU87_RS24165 (78015) | 78015..79310 | - | 1296 | WP_001388364.1 | type 4b pilus protein PilO2 | - |
| KFU87_RS24170 (79303) | 79303..80985 | - | 1683 | WP_000748143.1 | Outer membrane lipoprotein BfpB | VF |
| KFU87_RS24175 (80999) | 80999..81436 | - | 438 | WP_000539807.1 | hypothetical protein | VF |
| KFU87_RS24180 (81436) | 81436..82503 | - | 1068 | WP_012783947.1 | hypothetical protein | VF |
| KFU87_RS24185 (83127) | 83127..83423 | - | 297 | WP_050571830.1 | hypothetical protein | - |
| KFU87_RS24190 (83590) | 83590..83844 | - | 255 | WP_001136187.1 | PilI type IV pilus biogenesis protein | - |
| KFU87_RS24195 (84006) | 84006..84557 | - | 552 | WP_000744644.1 | hypothetical protein | - |
| KFU87_RS24200 (84730) | 84730..85413 | - | 684 | WP_000213859.1 | conjugal transfer protein TraC | - |
| KFU87_RS24205 (85667) | 85667..86200 | - | 534 | WP_001303319.1 | transcription termination/antitermination NusG family protein | - |
| KFU87_RS24210 (86642) | 86642..86929 | - | 288 | WP_000074855.1 | conjugal transfer protein TraA | - |
| KFU87_RS24215 (86967) | 86967..87125 | - | 159 | Protein_96 | ash family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|