MGE detailed information
MGE type: Prophage MGE length: 53373 bp
Accession: NZ_CP073988 Location: 2211837..2265209 Organism: Escherichia coli strain MB10 Replicon: chromosome
Accession: NZ_CP073988 Location: 2211837..2265209 Organism: Escherichia coli strain MB10 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU65_RS10775 (2208086) | 2208086..2210512 | - | 2427 | WP_001761878.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFU65_RS10780 (2210711) | 2210711..2211016 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KFU65_RS10785 (2211124) | 2211124..2211834 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| KFU65_RS10790 (2211837) | 2211837..2212397 | - | 561 | WP_001138584.1 | spermidine N1-acetyltransferase | - |
| KFU65_RS10795 (2212432) | 2212432..2212773 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KFU65_RS10800 (2212908) | 2212908..2213234 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| KFU65_RS10805 (2213440) | 2213440..2214654 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KFU65_RS10810 (2214666) | 2214666..2215685 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| KFU65_RS10815 (2215873) | 2215873..2217153 | - | 1281 | WP_032266244.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KFU65_RS10820 (2217188) | 2217188..2217439 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KFU65_RS10825 (2217512) | 2217512..2219936 | - | 2425 | Protein_2113 | 3'-5' exoribonuclease | - |
| KFU65_RS10830 (2220030) | 2220030..2220221 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KFU65_RS10835 (2220218) | 2220218..2220406 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KFU65_RS10840 (2220974) | 2220974..2221192 | - | 219 | WP_001171952.1 | protein YdfC | - |
| KFU65_RS10845 (2221222) | 2221222..2221350 | - | 129 | WP_000344930.1 | protein YdfB | - |
| KFU65_RS10850 (2221352) | 2221352..2221507 | - | 156 | WP_000379588.1 | DUF1391 family protein | - |
| KFU65_RS10855 (2221676) | 2221676..2222083 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| KFU65_RS10860 (2222164) | 2222164..2222391 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| KFU65_RS10865 (2222375) | 2222375..2222896 | + | 522 | WP_000705355.1 | toxin YdaT family protein | - |
| KFU65_RS10870 (2222877) | 2222877..2223842 | + | 966 | WP_000054514.1 | hypothetical protein | - |
| KFU65_RS10875 (2223883) | 2223883..2224305 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KFU65_RS10880 (2224302) | 2224302..2224791 | + | 490 | Protein_2124 | class I SAM-dependent methyltransferase | - |
| KFU65_RS10885 (2225269) | 2225269..2225689 | + | 421 | Protein_2125 | hypothetical protein | - |
| KFU65_RS10890 (2226345) | 2226345..2227394 | + | 1050 | Protein_2126 | ISNCY family transposase ISCARN112 | Transposase |
| KFU65_RS10895 (2227515) | 2227515..2227664 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KFU65_RS10900 (2228101) | 2228101..2228433 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KFU65_RS10905 (2228636) | 2228636..2228941 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KFU65_RS10910 (2228966) | 2228966..2229205 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFU65_RS10915 (2229205) | 2229205..2229492 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFU65_RS10920 (2229564) | 2229564..2229719 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KFU65_RS10925 (2229936) | 2229936..2230187 | + | 252 | WP_000980994.1 | protein Rem | - |
| KFU65_RS10930 (2230254) | 2230254..2230532 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KFU65_RS10935 (2230534) | 2230534..2231583 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KFU65_RS10940 (2231597) | 2231597..2232349 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KFU65_RS10945 (2232627) | 2232627..2232716 | - | 90 | WP_122987542.1 | hypothetical protein | - |
| KFU65_RS10950 (2232771) | 2232771..2232982 | - | 212 | Protein_2138 | cold shock-like protein CspF | - |
| KFU65_RS10955 (2233281) | 2233281..2233496 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| KFU65_RS10960 (2233860) | 2233860..2234030 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| KFU65_RS10965 (2234250) | 2234250..2234465 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KFU65_RS10970 (2234470) | 2234470..2234781 | + | 312 | WP_000189915.1 | YdfR family protein | - |
| KFU65_RS10975 (2234778) | 2234778..2235311 | + | 534 | WP_001409770.1 | lysozyme | - |
| KFU65_RS10980 (2235308) | 2235308..2235805 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KFU65_RS10985 (2236167) | 2236167..2236379 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KFU65_RS10990 (2236390) | 2236390..2236578 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KFU65_RS10995 (2236581) | 2236581..2236646 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KFU65_RS11000 (2236726) | 2236726..2236881 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KFU65_RS11005 (2237053) | 2237053..2237226 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KFU65_RS11010 (2237378) | 2237378..2237788 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KFU65_RS11015 (2237846) | 2237846..2238079 | - | 234 | WP_257204730.1 | YlcI/YnfO family protein | - |
| KFU65_RS11020 (2238468) | 2238468..2239013 | + | 546 | WP_000453603.1 | DNA-packaging protein | - |
| KFU65_RS11025 (2238988) | 2238988..2240912 | + | 1925 | Protein_2153 | phage terminase large subunit family protein | - |
| KFU65_RS11030 (2240909) | 2240909..2241115 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KFU65_RS11035 (2241112) | 2241112..2242713 | + | 1602 | WP_072731531.1 | phage portal protein | - |
| KFU65_RS11040 (2242694) | 2242694..2244013 | + | 1320 | WP_000123333.1 | S49 family peptidase | - |
| KFU65_RS11045 (2244023) | 2244023..2244355 | + | 333 | WP_001549228.1 | head decoration protein | - |
| KFU65_RS11050 (2244411) | 2244411..2245436 | + | 1026 | WP_000063224.1 | major capsid protein | - |
| KFU65_RS11055 (2245478) | 2245478..2245873 | + | 396 | WP_000158880.1 | DNA-packaging protein FI | - |
| KFU65_RS11060 (2245885) | 2245885..2246238 | + | 354 | WP_000752994.1 | head-tail joining protein | - |
| KFU65_RS11065 (2246250) | 2246250..2246828 | + | 579 | WP_000985123.1 | phage tail protein | - |
| KFU65_RS11070 (2246825) | 2246825..2247220 | + | 396 | WP_000683143.1 | phage minor tail U family protein | - |
| KFU65_RS11075 (2247228) | 2247228..2247968 | + | 741 | WP_072731576.1 | phage tail protein | - |
| KFU65_RS11080 (2247984) | 2247984..2248406 | + | 423 | WP_000479139.1 | phage minor tail protein G | - |
| KFU65_RS11085 (2248388) | 2248388..2248822 | + | 435 | WP_000459480.1 | phage tail assembly protein T | - |
| KFU65_RS11090 (2248815) | 2248815..2251394 | + | 2580 | WP_000840345.1 | phage tail tape measure protein | - |
| KFU65_RS11095 (2251391) | 2251391..2251720 | + | 330 | WP_000847345.1 | phage tail protein | - |
| KFU65_RS11100 (2251720) | 2251720..2252418 | + | 699 | WP_077150944.1 | phage minor tail protein L | - |
| KFU65_RS11105 (2252424) | 2252424..2253167 | + | 744 | WP_000140764.1 | C40 family peptidase | - |
| KFU65_RS11110 (2253104) | 2253104..2253706 | + | 603 | WP_000090905.1 | tail assembly protein | - |
| KFU65_RS11115 (2253767) | 2253767..2257246 | + | 3480 | WP_257204731.1 | host specificity protein J | - |
| KFU65_RS11120 (2257314) | 2257314..2257913 | + | 600 | WP_001233182.1 | Outer membrane protein X | VF |
| KFU65_RS11125 (2257978) | 2257978..2261328 | + | 3351 | WP_072731578.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KFU65_RS11130 (2261328) | 2261328..2261903 | + | 576 | WP_032266059.1 | tail fiber assembly protein | - |
| KFU65_RS11135 (2262001) | 2262001..2262591 | - | 591 | WP_032266058.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFU65_RS11140 (2262908) | 2262908..2263141 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KFU65_RS11145 (2263210) | 2263210..2263323 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KFU65_RS11150 (2263926) | 2263926..2265209 | + | 1284 | Protein_2178 | MHS family MFS transporter YdfJ | - |
| KFU65_RS11155 (2265298) | 2265298..2266758 | + | 1461 | WP_000527813.1 | mannitol dehydrogenase family protein | - |
| KFU65_RS11160 (2266794) | 2266794..2266997 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KFU65_RS11165 (2267174) | 2267174..2267860 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KFU65_RS11170 (2267949) | 2267949..2268695 | - | 747 | WP_000636571.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|