MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 108307 bp
Accession: NZ_CP073986 Location: 1..108307 Organism: Escherichia coli strain MB15 Replicon: plasmid pYLMB15b
Accession: NZ_CP073986 Location: 1..108307 Organism: Escherichia coli strain MB15 Replicon: plasmid pYLMB15b
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU92_RS24645 (KFU92_24485) | 1..882 | + | 882 | WP_072647168.1 | RepB family plasmid replication initiator protein | - |
| KFU92_RS24650 (KFU92_24490) | 2395..3608 | + | 1214 | WP_162895303.1 | IS3 family transposase IS629 | Transposase |
| KFU92_RS24655 (KFU92_24495) | 3650..4057 | + | 408 | Protein_2 | hypothetical protein | - |
| KFU92_RS24660 (KFU92_24500) | 4097..4519 | + | 423 | WP_000007769.1 | hypothetical protein | - |
| KFU92_RS24665 | 4554..4685 | + | 132 | WP_001113883.1 | hypothetical protein | - |
| KFU92_RS24670 (KFU92_24505) | 4695..5087 | + | 393 | WP_001281115.1 | hypothetical protein | - |
| KFU92_RS24675 (KFU92_24510) | 5423..6307 | + | 885 | WP_001113742.1 | RepB family plasmid replication initiator protein | - |
| KFU92_RS24680 (KFU92_24515) | 6600..7409 | + | 810 | WP_001154687.1 | GIY-YIG nuclease family protein | - |
| KFU92_RS24685 (KFU92_24520) | 7578..8774 | + | 1197 | WP_001285362.1 | AAA family ATPase | - |
| KFU92_RS24690 (KFU92_24525) | 8791..9792 | + | 1002 | WP_000038866.1 | ParB family protein | - |
| KFU92_RS24695 (KFU92_24530) | 10018..11724 | + | 1707 | WP_106490964.1 | hypothetical protein | - |
| KFU92_RS24700 (KFU92_24535) | 11784..13373 | + | 1590 | WP_032203566.1 | hypothetical protein | - |
| KFU92_RS24705 (KFU92_24540) | 13383..14198 | + | 816 | WP_104774959.1 | hypothetical protein | - |
| KFU92_RS24710 (KFU92_24545) | 14351..14815 | + | 465 | WP_224504851.1 | hypothetical protein | - |
| KFU92_RS24715 (KFU92_24550) | 14827..15336 | + | 510 | WP_000509940.1 | hypothetical protein | - |
| KFU92_RS24720 (KFU92_24555) | 15496..16609 | + | 1114 | Protein_15 | IS4 family transposase IS186A | Transposase |
| KFU92_RS24725 (KFU92_24560) | 16803..16958 | - | 156 | WP_032203563.1 | Hok/Gef family protein | - |
| KFU92_RS24730 (KFU92_24565) | 17356..18574 | + | 1219 | Protein_17 | IS3 family transposase | - |
| KFU92_RS24735 (KFU92_24570) | 18595..19611 | + | 1017 | Protein_18 | IS256 family transposase IS1414 | Transposase |
| KFU92_RS24740 (KFU92_24575) | 19659..21833 | - | 2175 | WP_032176963.1 | Catabolite control protein A | VF |
| KFU92_RS24745 (KFU92_24580) | 22167..22991 | + | 825 | WP_032203560.1 | MBL fold metallo-hydrolase | - |
| KFU92_RS24750 (KFU92_24585) | 23004..24239 | + | 1236 | WP_032177316.1 | MFS transporter | - |
| KFU92_RS24755 (KFU92_24590) | 24272..24985 | + | 714 | WP_032177315.1 | Protein SapB | VF |
| KFU92_RS24760 (KFU92_24595) | 25095..25792 | + | 698 | WP_227857199.1 | IS1-like element IS1B family transposase | - |
| KFU92_RS24765 (KFU92_24600) | 25997..27159 | + | 1163 | WP_085947598.1 | IS3 family transposase ISEc17 | Transposase |
| KFU92_RS24770 (KFU92_24605) | 27212..28084 | - | 873 | WP_000794337.1 | hypothetical protein | - |
| KFU92_RS24775 (KFU92_24610) | 28260..28424 | - | 165 | Protein_26 | XRE family transcriptional regulator | - |
| KFU92_RS24780 (KFU92_24615) | 28489..28830 | - | 342 | WP_032666102.1 | YecR family lipoprotein | - |
| KFU92_RS24785 (KFU92_24620) | 29124..29432 | - | 309 | Protein_28 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFU92_RS24790 (KFU92_24625) | 29490..29582 | + | 93 | Protein_29 | IS1 family transposase | - |
| KFU92_RS24795 (KFU92_24630) | 29771..30979 | - | 1209 | WP_137922728.1 | Methyl-accepting chemotaxis protein McpQ | VF |
| KFU92_RS24800 (KFU92_24635) | 31107..31811 | - | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| KFU92_RS24805 (KFU92_24640) | 31876..32442 | - | 567 | Protein_32 | DMT family transporter | - |
| KFU92_RS24810 (KFU92_24645) | 32580..32972 | - | 393 | WP_001351729.1 | isochorismatase family cysteine hydrolase | - |
| KFU92_RS24815 (KFU92_24650) | 32976..34727 | + | 1752 | Protein_34 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| KFU92_RS24820 (KFU92_24655) | 34761..35371 | + | 611 | Protein_35 | IS1-like element IS1B family transposase | - |
| KFU92_RS24825 (KFU92_24660) | 35382..35642 | - | 261 | WP_050010023.1 | hypothetical protein | - |
| KFU92_RS24830 (KFU92_24665) | 35653..36375 | - | 723 | WP_050010024.1 | hypothetical protein | - |
| KFU92_RS24835 (KFU92_24670) | 36526..37223 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| KFU92_RS24840 (KFU92_24675) | 37158..37586 | - | 429 | WP_257171185.1 | conjugative transfer protein MobI(A/C) | - |
| KFU92_RS24845 (KFU92_24680) | 38252..39232 | - | 981 | WP_097410882.1 | IS5-like element ISKpn26 family transposase | - |
| KFU92_RS24850 (KFU92_24685) | 39679..43194 | + | 3516 | WP_089571546.1 | Outer membrane protein IcsA autotransporter | VF |
| KFU92_RS24855 (KFU92_24690) | 43426..44123 | + | 698 | WP_095033700.1 | IS1-like element IS1B family transposase | - |
| KFU92_RS24860 (KFU92_24695) | 44505..44792 | - | 288 | WP_032206513.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KFU92_RS24865 (KFU92_24700) | 44789..45040 | - | 252 | WP_001139206.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KFU92_RS24870 (KFU92_24705) | 45623..49591 | + | 3969 | Protein_45 | helicase-related protein | - |
| KFU92_RS24875 (KFU92_24710) | 49625..50065 | + | 441 | WP_000224043.1 | hypothetical protein | - |
| KFU92_RS24880 (KFU92_24715) | 50062..50310 | + | 249 | WP_000747846.1 | hypothetical protein | - |
| KFU92_RS24885 (KFU92_24720) | 50456..52402 | + | 1947 | WP_032190829.1 | site-specific DNA-methyltransferase | - |
| KFU92_RS24890 (KFU92_24725) | 52405..55317 | + | 2913 | WP_001697581.1 | type III restriction-modification system endonuclease | - |
| KFU92_RS24895 (KFU92_24730) | 55393..56034 | - | 642 | WP_024175651.1 | hypothetical protein | - |
| KFU92_RS24900 (KFU92_24735) | 56223..56783 | - | 561 | WP_001697579.1 | Ref family protein | - |
| KFU92_RS24905 (KFU92_24740) | 57030..57341 | - | 312 | WP_001697578.1 | hypothetical protein | - |
| KFU92_RS24910 (KFU92_24745) | 57392..58423 | - | 1032 | WP_047615711.1 | site-specific integrase | - |
| KFU92_RS24915 (KFU92_24750) | 58431..58652 | - | 222 | WP_000542336.1 | hypothetical protein | - |
| KFU92_RS24920 (KFU92_24755) | 59289..60269 | - | 981 | WP_000019448.1 | IS5-like element ISKpn26 family transposase | - |
| KFU92_RS24925 (KFU92_24760) | 60727..61224 | - | 498 | WP_000019701.1 | 4Fe-4S binding protein | - |
| KFU92_RS24930 (KFU92_24765) | 61254..61850 | - | 597 | WP_032203482.1 | molecular chaperone | - |
| KFU92_RS24935 (KFU92_24770) | 61905..62681 | - | 777 | WP_000544912.1 | dimethyl sulfoxide reductase anchor subunit | - |
| KFU92_RS24940 (KFU92_24775) | 62674..63300 | - | 627 | WP_000816147.1 | dimethylsulfoxide reductase subunit B | - |
| KFU92_RS24945 (KFU92_24780) | 63314..65740 | - | 2427 | WP_000661392.1 | molybdopterin-dependent oxidoreductase | - |
| KFU92_RS24955 (KFU92_24790) | 66906..67115 | + | 210 | WP_000874156.1 | hypothetical protein | - |
| KFU92_RS24960 (KFU92_24795) | 67226..68077 | + | 852 | WP_000611664.1 | phage repressor protein C1 | - |
| KFU92_RS24965 | 68110..68442 | - | 333 | WP_224205061.1 | phage antirepressor KilAC domain-containing protein | - |
| KFU92_RS24970 | 68563..68913 | - | 351 | Protein_65 | ORF6N domain-containing protein | - |
| KFU92_RS24975 (KFU92_24805) | 69222..69443 | - | 222 | WP_001361625.1 | host cell division inhibitor Icd-like protein | - |
| KFU92_RS24980 (KFU92_24810) | 69462..69581 | - | 120 | WP_071527722.1 | ash family protein | - |
| KFU92_RS24985 (KFU92_24815) | 69750..70718 | + | 969 | WP_000654811.1 | IS5 family transposase IS903B | Transposase |
| KFU92_RS24990 (KFU92_24820) | 70842..71885 | - | 1044 | WP_072647226.1 | DUF968 domain-containing protein | - |
| KFU92_RS24995 (KFU92_24825) | 71913..72092 | - | 180 | WP_000113018.1 | hypothetical protein | - |
| KFU92_RS25000 (KFU92_24830) | 72097..72477 | - | 381 | WP_001216045.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| KFU92_RS25005 (KFU92_24835) | 72477..72698 | - | 222 | WP_001190712.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| KFU92_RS25010 (KFU92_24840) | 72881..74437 | + | 1557 | WP_072647227.1 | type I restriction-modification system subunit M | - |
| KFU92_RS25015 (KFU92_24845) | 74434..75702 | + | 1269 | WP_106490977.1 | restriction endonuclease subunit S | - |
| KFU92_RS25020 (KFU92_24850) | 75824..78940 | + | 3117 | WP_072647223.1 | HsdR family type I site-specific deoxyribonuclease | - |
| KFU92_RS25025 (KFU92_24855) | 79207..79713 | - | 507 | WP_032203676.1 | 3'-phosphatase 5'-polynucleotide kinase phage-associated protein | - |
| KFU92_RS25030 (KFU92_24860) | 79786..81047 | - | 1262 | Protein_77 | hypothetical protein | - |
| KFU92_RS25035 (KFU92_24865) | 81582..82279 | + | 698 | WP_103215986.1 | IS1-like element IS1A family transposase | - |
| KFU92_RS25040 (KFU92_24870) | 82214..82486 | - | 273 | WP_050489281.1 | PerC family transcriptional regulator | - |
| KFU92_RS25045 (KFU92_24875) | 82576..83310 | + | 735 | WP_000578338.1 | helix-turn-helix domain-containing protein | - |
| KFU92_RS25050 (KFU92_24880) | 83465..83605 | - | 141 | Protein_81 | L-threonine dehydrogenase | - |
| KFU92_RS25060 (KFU92_24890) | 84933..85516 | - | 584 | Protein_83 | IS1 family transposase | - |
| KFU92_RS25065 (KFU92_24895) | 85716..89189 | - | 3474 | WP_104692566.1 | cellulose synthase complex outer membrane protein BcsC | - |
| KFU92_RS25070 | 89171..89323 | - | 153 | Protein_85 | endo-1,4-D-glucanase | - |
| KFU92_RS25075 (KFU92_24900) | 89656..90042 | - | 387 | Protein_86 | IS200/IS605 family transposase | - |
| KFU92_RS25080 (KFU92_24905) | 90229..91575 | - | 1347 | WP_059039599.1 | group II intron reverse transcriptase/maturase | - |
| KFU92_RS25085 (KFU92_24910) | 92319..94469 | - | 2151 | WP_001351999.1 | cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB | - |
| KFU92_RS25090 (KFU92_24915) | 94533..96638 | - | 2106 | WP_050489276.1 | UDP-forming cellulose synthase catalytic subunit | - |
| KFU92_RS25095 (KFU92_24920) | 96719..97415 | + | 697 | Protein_90 | IS1 family transposase | - |
| KFU92_RS25100 (KFU92_24925) | 97462..98808 | - | 1347 | WP_161955445.1 | GGDEF domain-containing protein | - |
| KFU92_RS25105 (KFU92_24930) | 98798..101131 | - | 2334 | WP_220176419.1 | putative cyclic di-GMP phosphodiesterase PdeI | VF |
| KFU92_RS25110 (KFU92_24935) | 101641..102013 | + | 373 | Protein_93 | IS1 family transposase IS1N | Transposase |
| KFU92_RS25115 (KFU92_24940) | 102027..102635 | + | 609 | Protein_94 | IS21 family transposase IS100kyp | Transposase |
| KFU92_RS25120 (KFU92_24945) | 102632..103413 | + | 782 | Protein_95 | IS21 family transposase IS100kyp | Transposase |
| KFU92_RS25125 (KFU92_24950) | 103505..103627 | - | 123 | Protein_96 | IS66 family transposase ISEc23 | Transposase |
| KFU92_RS25130 (KFU92_24955) | 103691..104395 | + | 705 | Protein_97 | IS66 family transposase ISEc23 | Transposase |
| KFU92_RS25135 (KFU92_24960) | 104743..106041 | - | 1299 | WP_252152988.1 | Ig-like domain-containing protein | - |
| KFU92_RS25145 | 106861..107247 | - | 387 | WP_257171184.1 | Ig-like domain repeat protein | - |
| KFU92_RS25150 | 107538..107903 | - | 366 | Protein_101 | DUF4165 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|