MGE detailed information
MGE type: Prophage MGE length: 72543 bp
Accession: NZ_CP073958 Location: 2316359..2388901 Organism: Escherichia coli strain MB46 Replicon: chromosome
Accession: NZ_CP073958 Location: 2316359..2388901 Organism: Escherichia coli strain MB46 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU88_RS11445 (2313734) | 2313734..2316160 | - | 2427 | WP_257187992.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFU88_RS11450 (2316359) | 2316359..2316664 | - | 306 | WP_001295396.1 | DUF1161 domain-containing protein | - |
| KFU88_RS11455 (2316772) | 2316772..2317482 | + | 711 | WP_072104773.1 | YnfC family lipoprotein | - |
| KFU88_RS11460 (2317485) | 2317485..2318045 | - | 561 | WP_257187993.1 | spermidine N1-acetyltransferase | - |
| KFU88_RS11465 (2318080) | 2318080..2318421 | - | 342 | WP_000705197.1 | DUF1283 family protein | - |
| KFU88_RS11470 (2318556) | 2318556..2318882 | + | 327 | WP_001295395.1 | YnfA family protein | - |
| KFU88_RS11475 (2319088) | 2319088..2320302 | + | 1215 | WP_001295394.1 | starvation-sensing protein RspA | - |
| KFU88_RS11480 (2320314) | 2320314..2321333 | + | 1020 | WP_000836059.1 | Zn-dependent oxidoreductase | - |
| KFU88_RS11485 (2321521) | 2321521..2322801 | - | 1281 | WP_000876974.1 | Tyrosine recombinase XerD ; Integrase | Integrase |
| KFU88_RS11490 (2322836) | 2322836..2323087 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KFU88_RS11495 (2323160) | 2323160..2325631 | - | 2472 | WP_053270473.1 | exonuclease | - |
| KFU88_RS11500 (2325725) | 2325725..2325916 | - | 192 | WP_001083270.1 | lysis protein YdfD | - |
| KFU88_RS11505 (2325913) | 2325913..2326101 | - | 189 | WP_000854560.1 | cell division inhibition protein DicB | - |
| KFU88_RS11510 (2326604) | 2326604..2326804 | + | 201 | WP_000159335.1 | hypothetical protein | - |
| KFU88_RS11520 (2328463) | 2328463..2328615 | - | 153 | WP_000379591.1 | DUF1391 family protein | - |
| KFU88_RS11525 (2328784) | 2328784..2329191 | - | 408 | WP_000381212.1 | helix-turn-helix domain-containing protein | - |
| KFU88_RS11530 (2329272) | 2329272..2329499 | + | 228 | WP_000921596.1 | Cro/CI family transcriptional regulator | - |
| KFU88_RS11535 (2329483) | 2329483..2330004 | + | 522 | WP_257187994.1 | toxin YdaT domain-containing protein | - |
| KFU88_RS11540 (2329985) | 2329985..2330950 | + | 966 | WP_000054497.1 | hypothetical protein | - |
| KFU88_RS11545 (2330991) | 2330991..2331413 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KFU88_RS11550 (2331410) | 2331410..2331899 | + | 490 | Protein_2259 | class I SAM-dependent methyltransferase | - |
| KFU88_RS11555 (2332377) | 2332377..2332798 | + | 422 | Protein_2260 | hypothetical protein | - |
| KFU88_RS11560 (2333454) | 2333454..2334476 | + | 1023 | Protein_2261 | ISNCY family transposase ISCARN112 | Transposase |
| KFU88_RS11565 (2334597) | 2334597..2334746 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KFU88_RS11570 (2335183) | 2335183..2335515 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KFU88_RS11575 (2335718) | 2335718..2335870 | - | 153 | Protein_2264 | hypothetical protein | - |
| KFU88_RS11580 (2335928) | 2335928..2336896 | - | 969 | WP_000654805.1 | IS5 family transposase IS903B | Transposase |
| KFU88_RS11585 (2336928) | 2336928..2337089 | - | 162 | Protein_2266 | hypothetical protein | - |
| KFU88_RS11590 (2337114) | 2337114..2337353 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFU88_RS11595 (2337353) | 2337353..2337640 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFU88_RS11600 (2337712) | 2337712..2337867 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KFU88_RS11605 (2338084) | 2338084..2338335 | + | 252 | WP_000980994.1 | protein Rem | - |
| KFU88_RS11610 (2338402) | 2338402..2338680 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KFU88_RS11615 (2338682) | 2338682..2339731 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KFU88_RS11620 (2339745) | 2339745..2340497 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KFU88_RS11625 (2340775) | 2340775..2340864 | - | 90 | WP_122985911.1 | hypothetical protein | - |
| KFU88_RS11630 (2340919) | 2340919..2341131 | - | 213 | WP_024172454.1 | cold shock-like protein CspF | - |
| KFU88_RS11635 (2341430) | 2341430..2341645 | + | 216 | WP_000066485.1 | cold shock-like protein CspB | - |
| KFU88_RS11640 (2342009) | 2342009..2342179 | - | 171 | WP_001405948.1 | putative zinc-binding protein YnfU | - |
| KFU88_RS11645 (2342398) | 2342398..2342613 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KFU88_RS11650 (2342618) | 2342618..2342929 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KFU88_RS11655 (2342926) | 2342926..2343459 | + | 534 | WP_001092971.1 | lysozyme | - |
| KFU88_RS11660 (2343456) | 2343456..2343953 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KFU88_RS11665 (2344316) | 2344316..2344528 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KFU88_RS11670 (2344539) | 2344539..2344727 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KFU88_RS11675 (2344730) | 2344730..2344795 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KFU88_RS11680 (2344875) | 2344875..2345030 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KFU88_RS11685 (2345202) | 2345202..2345374 | + | 173 | Protein_2286 | addiction module toxin, GnsA/GnsB family | - |
| KFU88_RS11690 (2345526) | 2345526..2345936 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| KFU88_RS11695 (2345994) | 2345994..2346227 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KFU88_RS11700 (2346616) | 2346616..2347161 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KFU88_RS11705 (2347136) | 2347136..2349061 | + | 1926 | WP_257187995.1 | phage terminase large subunit family protein | - |
| KFU88_RS11710 (2349058) | 2349058..2349264 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KFU88_RS11715 (2349261) | 2349261..2350862 | + | 1602 | WP_001356325.1 | phage portal protein | - |
| KFU88_RS11720 (2350843) | 2350843..2352162 | + | 1320 | WP_001723435.1 | S49 family peptidase | - |
| KFU88_RS11725 (2352172) | 2352172..2352504 | + | 333 | WP_001358225.1 | head decoration protein | - |
| KFU88_RS11730 (2352560) | 2352560..2353585 | + | 1026 | WP_072657557.1 | major capsid protein | - |
| KFU88_RS11735 (2353627) | 2353627..2354022 | + | 396 | WP_052936358.1 | DNA-packaging protein FI | - |
| KFU88_RS11740 (2354034) | 2354034..2354387 | + | 354 | WP_000785282.1 | head-tail joining protein | - |
| KFU88_RS11745 (2354399) | 2354399..2354976 | + | 578 | Protein_2298 | phage tail protein | - |
| KFU88_RS11750 (2354973) | 2354973..2355368 | + | 396 | WP_001535869.1 | phage minor tail U family protein | - |
| KFU88_RS11755 (2355376) | 2355376..2356116 | + | 741 | WP_001619477.1 | phage tail protein | - |
| KFU88_RS11760 (2356132) | 2356132..2356554 | + | 423 | WP_000479151.1 | phage minor tail protein G | - |
| KFU88_RS11765 (2356536) | 2356536..2356970 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| KFU88_RS11770 (2356963) | 2356963..2359542 | + | 2580 | WP_053270648.1 | phage tail tape measure protein | - |
| KFU88_RS11775 (2359539) | 2359539..2359868 | + | 330 | WP_000847331.1 | phage tail protein | - |
| KFU88_RS11780 (2359868) | 2359868..2360566 | + | 699 | WP_001152624.1 | phage minor tail protein L | - |
| KFU88_RS11785 (2360572) | 2360572..2361315 | + | 744 | WP_000194780.1 | C40 family peptidase | - |
| KFU88_RS11790 (2361312) | 2361312..2361884 | + | 573 | WP_000847666.1 | tail assembly protein | - |
| KFU88_RS11795 (2361945) | 2361945..2365343 | + | 3399 | WP_063101755.1 | host specificity protein J | - |
| KFU88_RS11800 (2365410) | 2365410..2366009 | + | 600 | WP_001230352.1 | hypothetical protein | VF |
| KFU88_RS11805 (2366074) | 2366074..2369421 | + | 3348 | WP_072153538.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KFU88_RS11810 (2369421) | 2369421..2369996 | + | 576 | WP_053270556.1 | tail fiber assembly protein | - |
| KFU88_RS11815 (2370094) | 2370094..2370684 | - | 591 | WP_257187996.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFU88_RS11820 (2371001) | 2371001..2371234 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KFU88_RS11825 (2371303) | 2371303..2371416 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KFU88_RS11830 (2371615) | 2371615..2372843 | + | 1229 | WP_088895425.1 | IS3 family transposase IS2 | Transposase |
| KFU88_RS11835 (2373356) | 2373356..2374639 | + | 1284 | Protein_2316 | MHS family MFS transporter YdfJ | - |
| KFU88_RS11840 (2374728) | 2374728..2376188 | + | 1461 | WP_001752530.1 | mannitol dehydrogenase family protein | - |
| KFU88_RS11845 (2376224) | 2376224..2376427 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KFU88_RS11850 (2376605) | 2376605..2377291 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KFU88_RS11855 (2377380) | 2377380..2378126 | - | 747 | WP_000636570.1 | 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | VF |
| KFU88_RS11860 (2378263) | 2378263..2380308 | + | 2046 | WP_053270555.1 | peptidyl-dipeptidase Dcp | - |
| KFU88_RS11865 (2380353) | 2380353..2380871 | - | 519 | WP_001024808.1 | 2-oxo-tetronate isomerase | - |
| KFU88_RS11870 (2380946) | 2380946..2381643 | + | 698 | WP_257187856.1 | IS1 family transposase | - |
| KFU88_RS11875 (2381923) | 2381923..2382315 | + | 393 | WP_000671744.1 | YdeI family stress tolerance OB fold protein | - |
| KFU88_RS11880 (2382570) | 2382570..2383460 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| KFU88_RS11885 (2383575) | 2383575..2383679 | - | 105 | WP_211180496.1 | protein MgtT | - |
| KFU88_RS11890 (2383679) | 2383679..2383774 | - | 96 | WP_000901367.1 | protein MgtS | - |
| KFU88_RS11895 (2383901) | 2383901..2385088 | - | 1188 | WP_001054196.1 | efflux MFS transporter YdeE | - |
| KFU88_RS11900 (2385283) | 2385283..2386182 | + | 900 | WP_000087211.1 | O-acetylserine/cysteine exporter | - |
| KFU88_RS11905 (2386213) | 2386213..2386431 | - | 219 | WP_000803653.1 | multiple antibiotic resistance protein MarB | - |
| KFU88_RS11910 (2386463) | 2386463..2386846 | - | 384 | WP_000091199.1 | HTH-type transcriptional activator RhaS | VF |
| KFU88_RS11915 (2386867) | 2386867..2387301 | - | 435 | WP_000843419.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
| KFU88_RS11920 (2387521) | 2387521..2387841 | + | 321 | WP_000273128.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KFU88_RS11925 (2387831) | 2387831..2388115 | + | 285 | WP_000268704.1 | helix-turn-helix transcriptional regulator | - |
| KFU88_RS11930 (2388236) | 2388236..2388901 | + | 666 | WP_000885033.1 | NAAT family transporter MarC | - |
| KFU88_RS11935 (2388926) | 2388926..2390116 | - | 1191 | WP_000210799.1 | L-arabinose MFS transporter | - |
| KFU88_RS11940 (2390266) | 2390266..2391381 | - | 1116 | WP_000258600.1 | putative protein YneK | - |
| KFU88_RS11945 (2391459) | 2391459..2392340 | - | 882 | WP_000366501.1 | LysR family transcriptional regulator | - |
| KFU88_RS11950 (2392441) | 2392441..2393829 | + | 1389 | WP_053270554.1 | succinate-semialdehyde dehydrogenase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|