MGE detailed information
MGE type: Prophage MGE length: 59866 bp
Accession: NZ_CP073939 Location: 4141331..4201196 Organism: Escherichia coli strain MB53 Replicon: chromosome
Accession: NZ_CP073939 Location: 4141331..4201196 Organism: Escherichia coli strain MB53 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU83_RS20175 (4138059) | 4138059..4138523 | - | 465 | WP_000412428.1 | redox-sensitive transcriptional activator SoxR | - |
| KFU83_RS20180 (4138609) | 4138609..4138932 | + | 324 | WP_000019358.1 | superoxide response transcriptional regulator SoxS | - |
| KFU83_RS20185 (4138935) | 4138935..4140521 | - | 1587 | WP_000019548.1 | c-di-GMP phosphodiesterase PdeC | - |
| KFU83_RS20190 (4140951) | 4140951..4141232 | + | 282 | WP_001295689.1 | YjcB family protein | - |
| KFU83_RS20195 (4141331) | 4141331..4141867 | - | 537 | WP_000168305.1 | single-stranded DNA-binding protein SSB1 | - |
| KFU83_RS20200 (4142122) | 4142122..4144944 | + | 2823 | WP_000357740.1 | excinuclease ABC subunit UvrA | - |
| KFU83_RS20205 (4144979) | 4144979..4145335 | - | 357 | WP_000155657.1 | MmcQ/YjbR family DNA-binding protein | - |
| KFU83_RS20210 (4145339) | 4145339..4145755 | - | 417 | WP_000270375.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| KFU83_RS20215 (4145866) | 4145866..4146579 | - | 714 | WP_257188390.1 | acid phosphatase AphA | - |
| KFU83_RS20220 (4146981) | 4146981..4147203 | + | 223 | Protein_3956 | hypothetical protein | - |
| KFU83_RS20225 (4147268) | 4147268..4148476 | - | 1209 | WP_001339197.1 | IS4 family transposase IS10R | Transposase |
| KFU83_RS20230 (4148586) | 4148586..4148812 | + | 227 | Protein_3958 | hypothetical protein | - |
| KFU83_RS20240 (4149821) | 4149821..4151014 | - | 1194 | WP_000486988.1 | aromatic amino acid transaminase | - |
| KFU83_RS20245 (4151267) | 4151267..4152346 | - | 1080 | WP_001147328.1 | alanine racemase | - |
| KFU83_RS20250 (4152399) | 4152399..4153814 | - | 1416 | WP_000918363.1 | replicative DNA helicase | - |
| KFU83_RS20255 (4153897) | 4153897..4154880 | + | 984 | WP_000235509.1 | L-threonine 3-dehydrogenase | VF |
| KFU83_RS20260 (4155046) | 4155046..4155288 | - | 243 | WP_000891404.1 | envelope stress response protein PspG | - |
| KFU83_RS20265 (4155422) | 4155422..4156459 | - | 1038 | WP_001514813.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| KFU83_RS20270 (4156548) | 4156548..4157645 | + | 1098 | WP_063085548.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KFU83_RS20275 (4157707) | 4157707..4157955 | + | 249 | WP_001217553.1 | DinI-like family protein | - |
| KFU83_RS20280 (4157952) | 4157952..4158074 | - | 123 | WP_077249852.1 | capsid protein | - |
| KFU83_RS20285 (4158099) | 4158099..4158662 | - | 564 | WP_000639149.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| KFU83_RS20290 (4158661) | 4158661..4159053 | + | 393 | WP_257188178.1 | hypothetical protein | - |
| KFU83_RS20295 (4159134) | 4159134..4159496 | + | 363 | Protein_3971 | tail fiber assembly protein | - |
| KFU83_RS20300 (4159468) | 4159468..4160070 | - | 603 | WP_080212116.1 | tail fiber assembly protein | - |
| KFU83_RS20305 (4160070) | 4160070..4160870 | - | 801 | WP_257188179.1 | phage tail protein | - |
| KFU83_RS20310 (4160874) | 4160874..4161458 | - | 585 | WP_001752128.1 | YmfQ family protein | - |
| KFU83_RS20315 (4161449) | 4161449..4162507 | - | 1059 | WP_257188180.1 | baseplate J/gp47 family protein | - |
| KFU83_RS20320 (4162494) | 4162494..4162919 | - | 426 | WP_000424732.1 | phage GP46 family protein | - |
| KFU83_RS20325 (4162919) | 4162919..4163467 | - | 549 | WP_001752126.1 | phage baseplate assembly protein V | - |
| KFU83_RS20330 (4163467) | 4163467..4164546 | - | 1080 | WP_001752125.1 | phage late control D family protein | - |
| KFU83_RS20335 (4164543) | 4164543..4165871 | - | 1329 | WP_000219915.1 | DNA circularization N-terminal domain-containing protein | - |
| KFU83_RS20340 (4165962) | 4165962..4166456 | - | 495 | WP_023277704.1 | hypothetical protein | - |
| KFU83_RS20345 (4166556) | 4166556..4168388 | - | 1833 | WP_001752121.1 | phage tail tape measure protein | - |
| KFU83_RS20350 (4168530) | 4168530..4168799 | - | 270 | WP_000661047.1 | phage tail assembly protein | - |
| KFU83_RS20355 (4168799) | 4168799..4169155 | - | 357 | WP_000090998.1 | phage tail tube protein | - |
| KFU83_RS20360 (4169155) | 4169155..4170651 | - | 1497 | WP_000155715.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| KFU83_RS20365 (4170635) | 4170635..4170805 | - | 171 | WP_000497751.1 | DUF2635 domain-containing protein | - |
| KFU83_RS20370 (4170814) | 4170814..4171374 | - | 561 | WP_000779276.1 | hypothetical protein | - |
| KFU83_RS20375 (4171371) | 4171371..4171877 | - | 507 | WP_000213502.1 | hypothetical protein | - |
| KFU83_RS20380 (4171852) | 4171852..4172262 | - | 411 | WP_000702388.1 | phage head closure protein | - |
| KFU83_RS20385 (4172259) | 4172259..4172582 | - | 324 | WP_000927719.1 | head-tail connector protein | - |
| KFU83_RS20390 (4172585) | 4172585..4172785 | - | 201 | WP_000601364.1 | hypothetical protein | - |
| KFU83_RS20395 (4172835) | 4172835..4174040 | - | 1206 | WP_257188181.1 | phage major capsid protein | - |
| KFU83_RS20400 (4174055) | 4174055..4174705 | - | 651 | WP_001193631.1 | HK97 family phage prohead protease | - |
| KFU83_RS20405 (4174683) | 4174683..4175924 | - | 1242 | WP_000466255.1 | phage portal protein | - |
| KFU83_RS20410 (4175924) | 4175924..4176106 | - | 183 | WP_000605606.1 | protein YmfR | - |
| KFU83_RS20415 (4176118) | 4176118..4177851 | - | 1734 | WP_000088161.1 | terminase large subunit | - |
| KFU83_RS20420 (4177848) | 4177848..4178342 | - | 495 | WP_021576717.1 | phage terminase small subunit P27 family | - |
| KFU83_RS20425 (4178468) | 4178468..4178818 | - | 351 | WP_104725348.1 | HNH endonuclease | - |
| KFU83_RS20430 (4178985) | 4178985..4179209 | - | 225 | WP_000892817.1 | hypothetical protein | - |
| KFU83_RS20435 (4179337) | 4179337..4179489 | - | 153 | WP_032146275.1 | hypothetical protein | - |
| KFU83_RS20440 (4179477) | 4179477..4179938 | - | 462 | WP_001701537.1 | lysis protein | - |
| KFU83_RS20445 (4179922) | 4179922..4180398 | - | 477 | WP_257188182.1 | glycoside hydrolase family protein | - |
| KFU83_RS20450 (4180402) | 4180402..4180737 | - | 336 | WP_001120502.1 | phage holin, lambda family | - |
| KFU83_RS20455 (4180814) | 4180814..4181866 | - | 1053 | WP_001542659.1 | site-specific DNA-methyltransferase | - |
| KFU83_RS20460 (4182017) | 4182017..4182220 | - | 204 | WP_000917724.1 | hypothetical protein | - |
| KFU83_RS20465 (4182473) | 4182473..4183225 | - | 753 | WP_001547994.1 | antitermination protein | - |
| KFU83_RS20470 (4183239) | 4183239..4184228 | - | 990 | WP_001360050.1 | DUF968 domain-containing protein | - |
| KFU83_RS20475 (4184236) | 4184236..4185045 | - | 810 | WP_001061438.1 | KilA-N domain-containing protein | - |
| KFU83_RS20480 (4185065) | 4185065..4185454 | - | 390 | WP_000767113.1 | RusA family crossover junction endodeoxyribonuclease | - |
| KFU83_RS20485 (4185451) | 4185451..4185777 | - | 327 | WP_000210155.1 | LexA family transcriptional regulator | - |
| KFU83_RS20490 (4185774) | 4185774..4186427 | - | 654 | WP_024249645.1 | phage N-6-adenine-methyltransferase | - |
| KFU83_RS20495 (4186427) | 4186427..4186921 | - | 495 | WP_072126958.1 | PerC family transcriptional regulator | - |
| KFU83_RS20500 (4186918) | 4186918..4187910 | - | 993 | WP_000054957.1 | hypothetical protein | - |
| KFU83_RS20505 (4187867) | 4187867..4188079 | - | 213 | WP_001250270.1 | DUF4222 domain-containing protein | - |
| KFU83_RS20510 (4188255) | 4188255..4188806 | - | 552 | WP_032279270.1 | protein YmfL | - |
| KFU83_RS20515 (4188799) | 4188799..4189059 | - | 261 | WP_001191669.1 | helix-turn-helix transcriptional regulator | - |
| KFU83_RS20520 (4189157) | 4189157..4189849 | + | 693 | WP_001345148.1 | helix-turn-helix transcriptional regulator | - |
| KFU83_RS20525 (4190552) | 4190552..4190914 | + | 363 | WP_000135691.1 | protein YfdP | - |
| KFU83_RS20530 (4190980) | 4190980..4191804 | + | 825 | WP_001569327.1 | DUF2303 family protein | - |
| KFU83_RS20535 (4191932) | 4191932..4192468 | + | 537 | WP_000008210.1 | 5'-deoxynucleotidase | - |
| KFU83_RS20540 (4192459) | 4192459..4192821 | + | 363 | WP_001565177.1 | phage protein | - |
| KFU83_RS20545 (4192821) | 4192821..4193630 | + | 810 | WP_000206745.1 | hypothetical protein | - |
| KFU83_RS20550 (4193630) | 4193630..4194202 | + | 573 | WP_001061348.1 | 3'-5' exonuclease | - |
| KFU83_RS20555 (4194239) | 4194239..4194520 | + | 282 | WP_001093917.1 | pyocin activator PrtN family protein | - |
| KFU83_RS20560 (4194568) | 4194568..4194741 | - | 174 | WP_000390072.1 | hypothetical protein | - |
| KFU83_RS20565 (4194781) | 4194781..4195167 | - | 387 | WP_014640052.1 | hypothetical protein | Toxin Detail |
| KFU83_RS20570 (4195197) | 4195197..4195706 | - | 510 | WP_001339382.1 | Panacea domain-containing protein | Antitoxin Detail |
| KFU83_RS20575 (4196023) | 4196023..4196127 | - | 105 | Protein_4027 | tRNA-dihydrouridine synthase | - |
| KFU83_RS20580 (4196490) | 4196490..4197511 | - | 1022 | Protein_4028 | DUF2713 domain-containing protein | - |
| KFU83_RS20585 (4197830) | 4197830..4198345 | + | 516 | WP_001295691.1 | zinc uptake transcriptional repressor Zur | - |
| KFU83_RS20590 (4198387) | 4198387..4198596 | - | 210 | WP_001030593.1 | CsbD family protein | - |
| KFU83_RS20595 (4198712) | 4198712..4200037 | - | 1326 | WP_001301116.1 | MATE family efflux transporter DinF | - |
| KFU83_RS20600 (4200110) | 4200110..4200718 | - | 609 | WP_000646078.1 | transcriptional repressor LexA | - |
| KFU83_RS20605 (4200828) | 4200828..4201196 | - | 369 | WP_000002907.1 | diacylglycerol kinase | - |
| KFU83_RS20610 (4201367) | 4201367..4203790 | + | 2424 | WP_000017354.1 | glycerol-3-phosphate 1-O-acyltransferase PlsB | - |
| KFU83_RS20615 (4203945) | 4203945..4204817 | - | 873 | WP_000455227.1 | 4-hydroxybenzoate octaprenyltransferase | - |
| KFU83_RS20620 (4204830) | 4204830..4205327 | - | 498 | WP_001295693.1 | chorismate lyase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|