MGE detailed information
MGE type: Prophage MGE length: 67228 bp
Accession: NZ_CP073936 Location: 2241213..2308440 Organism: Escherichia coli strain MB56 Replicon: chromosome
Accession: NZ_CP073936 Location: 2241213..2308440 Organism: Escherichia coli strain MB56 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFU61_RS10725 (2237112) | 2237112..2238332 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| KFU61_RS10730 (2238457) | 2238457..2239152 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| KFU61_RS10735 (2239105) | 2239105..2240397 | - | 1293 | WP_001315626.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KFU61_RS10740 (2240556) | 2240556..2241170 | - | 615 | WP_000148710.1 | Tat proofreading chaperone DmsD | - |
| KFU61_RS10745 (2241213) | 2241213..2242067 | - | 855 | WP_000526503.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KFU61_RS10750 (2242069) | 2242069..2242686 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KFU61_RS10755 (2242697) | 2242697..2245120 | - | 2424 | WP_257182044.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFU61_RS10760 (2245181) | 2245181..2247607 | - | 2427 | WP_000041675.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KFU61_RS10765 (2247806) | 2247806..2248111 | - | 306 | WP_001300836.1 | DUF1161 domain-containing protein | - |
| KFU61_RS10770 (2248219) | 2248219..2248929 | + | 711 | WP_001321287.1 | YnfC family lipoprotein | - |
| KFU61_RS10775 (2248932) | 2248932..2249492 | - | 561 | WP_001138581.1 | spermidine N1-acetyltransferase | - |
| KFU61_RS10780 (2249527) | 2249527..2249868 | - | 342 | WP_000705211.1 | DUF1283 family protein | - |
| KFU61_RS10785 (2250003) | 2250003..2250329 | + | 327 | WP_000598292.1 | YnfA family protein | - |
| KFU61_RS10790 (2250535) | 2250535..2251749 | + | 1215 | Protein_2105 | starvation-sensing protein RspA | - |
| KFU61_RS10795 (2251761) | 2251761..2252780 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| KFU61_RS10800 (2252968) | 2252968..2254248 | - | 1281 | WP_000876958.1 | Putative defective protein IntQ ; Integrase | Integrase |
| KFU61_RS10805 (2254283) | 2254283..2254534 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| KFU61_RS10810 (2254607) | 2254607..2257078 | - | 2472 | WP_000048342.1 | exonuclease | - |
| KFU61_RS10815 (2257171) | 2257171..2257362 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| KFU61_RS10820 (2257359) | 2257359..2257547 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| KFU61_RS10825 (2258115) | 2258115..2258333 | - | 219 | WP_001171942.1 | protein YdfC | - |
| KFU61_RS10830 (2258363) | 2258363..2258491 | - | 129 | WP_000344964.1 | protein YdfB | - |
| KFU61_RS10835 (2258493) | 2258493..2258648 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| KFU61_RS10840 (2258815) | 2258815..2259222 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| KFU61_RS10845 (2259306) | 2259306..2259536 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| KFU61_RS10850 (2259520) | 2259520..2260041 | + | 522 | WP_000705358.1 | toxin YdaT family protein | - |
| KFU61_RS10855 (2260022) | 2260022..2260987 | + | 966 | WP_000054512.1 | hypothetical protein | - |
| KFU61_RS10860 (2261028) | 2261028..2261450 | + | 423 | WP_001151262.1 | DUF977 family protein | - |
| KFU61_RS10865 (2261447) | 2261447..2261936 | + | 490 | Protein_2120 | class I SAM-dependent methyltransferase | - |
| KFU61_RS10870 (2262414) | 2262414..2262835 | + | 422 | Protein_2121 | hypothetical protein | - |
| KFU61_RS10875 (2263491) | 2263491..2264513 | + | 1023 | Protein_2122 | ISNCY family transposase ISCARN112 | Transposase |
| KFU61_RS10880 (2264634) | 2264634..2264783 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| KFU61_RS10885 (2265220) | 2265220..2265552 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| KFU61_RS10890 (2265755) | 2265755..2266060 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KFU61_RS10895 (2266085) | 2266085..2266324 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KFU61_RS10900 (2266324) | 2266324..2266611 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KFU61_RS10905 (2266683) | 2266683..2266838 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KFU61_RS10910 (2266896) | 2266896..2268170 | + | 1275 | Protein_2129 | primase-like DNA-binding domain-containing protein | - |
| KFU61_RS10915 (2268458) | 2268458..2268703 | + | 246 | WP_000125506.1 | hypothetical protein | - |
| KFU61_RS10920 (2268700) | 2268700..2269149 | + | 450 | Protein_2131 | single-stranded DNA-binding protein | - |
| KFU61_RS10925 (2269367) | 2269367..2270407 | + | 1041 | WP_000228111.1 | major capsid protein | - |
| KFU61_RS10930 (2270417) | 2270417..2270758 | + | 342 | WP_000190773.1 | head decoration protein | - |
| KFU61_RS10935 (2270770) | 2270770..2271153 | + | 384 | WP_001178672.1 | AlpA family phage regulatory protein | - |
| KFU61_RS10940 (2271399) | 2271399..2271593 | + | 195 | WP_000453554.1 | hypothetical protein | - |
| KFU61_RS10945 (2271658) | 2271658..2272206 | - | 549 | WP_000389900.1 | HEPN domain-containing protein | - |
| KFU61_RS10950 (2272211) | 2272211..2273374 | - | 1164 | WP_001182199.1 | DUF262 domain-containing protein | - |
| KFU61_RS10955 (2273531) | 2273531..2274319 | + | 789 | Protein_2138 | major capsid protein | - |
| KFU61_RS10960 (2274361) | 2274361..2274756 | + | 396 | WP_000158868.1 | DNA-packaging protein FI | - |
| KFU61_RS10965 (2274768) | 2274768..2275121 | + | 354 | WP_000752986.1 | head-tail joining protein | - |
| KFU61_RS10970 (2275133) | 2275133..2275711 | + | 579 | WP_000985116.1 | phage tail protein | - |
| KFU61_RS10975 (2275708) | 2275708..2276103 | + | 396 | WP_000683142.1 | phage minor tail U family protein | - |
| KFU61_RS10980 (2276111) | 2276111..2276851 | + | 741 | WP_001564531.1 | phage tail protein | - |
| KFU61_RS10985 (2276867) | 2276867..2277289 | + | 423 | WP_000479142.1 | phage minor tail protein G | - |
| KFU61_RS10990 (2277271) | 2277271..2277705 | + | 435 | WP_000459465.1 | phage tail assembly protein T | - |
| KFU61_RS10995 (2277698) | 2277698..2280259 | + | 2562 | WP_257181945.1 | phage tail tape measure protein | - |
| KFU61_RS11000 (2280256) | 2280256..2280585 | + | 330 | WP_000847347.1 | phage tail protein | - |
| KFU61_RS11005 (2280585) | 2280585..2281283 | + | 699 | WP_001152626.1 | phage minor tail protein L | - |
| KFU61_RS11010 (2281289) | 2281289..2282032 | + | 744 | WP_000194783.1 | C40 family peptidase | - |
| KFU61_RS11015 (2282029) | 2282029..2282601 | + | 573 | WP_257182045.1 | tail assembly protein | - |
| KFU61_RS11020 (2282662) | 2282662..2286159 | + | 3498 | WP_000515713.1 | host specificity protein J | - |
| KFU61_RS11025 (2286230) | 2286230..2286829 | + | 600 | WP_001233093.1 | Outer membrane protein X | VF |
| KFU61_RS11030 (2286894) | 2286894..2289968 | + | 3075 | WP_257182038.1 | phage tail protein | - |
| KFU61_RS11035 (2289968) | 2289968..2290543 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KFU61_RS11040 (2290641) | 2290641..2291231 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| KFU61_RS11045 (2291548) | 2291548..2291781 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KFU61_RS11050 (2291850) | 2291850..2291963 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KFU61_RS11055 (2292484) | 2292484..2293299 | + | 816 | Protein_2158 | MHS family MFS transporter YdfJ | - |
| KFU61_RS11060 (2293488) | 2293488..2294750 | + | 1263 | WP_000608644.1 | IS1380 family transposase ISEcp1 | Transposase |
| KFU61_RS11065 (2294957) | 2294957..2295937 | - | 981 | WP_023155665.1 | IS5 family transposase ISKpn26 | Transposase |
| KFU61_RS11070 (2296238) | 2296238..2297113 | + | 876 | WP_000239591.1 | Beta-lactamase CTX-M-1 | ARG |
| KFU61_RS11075 (2297160) | 2297160..2297516 | - | 357 | Protein_2162 | WbuC family cupin fold metalloprotein | - |
| KFU61_RS11080 (2297506) | 2297506..2298105 | - | 600 | Protein_2163 | restriction endonuclease | - |
| KFU61_RS11085 (2298344) | 2298344..2298802 | + | 459 | WP_250110544.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| KFU61_RS11095 (2299468) | 2299468..2299689 | - | 222 | Protein_2166 | YqiJ family protein | - |
| KFU61_RS11100 (2299692) | 2299692..2300207 | + | 516 | Protein_2167 | MFS transporter | - |
| KFU61_RS11105 (2300296) | 2300296..2301756 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| KFU61_RS11110 (2301791) | 2301791..2301994 | - | 204 | WP_073503318.1 | putative selenium delivery protein YdfZ | - |
| KFU61_RS11115 (2302171) | 2302171..2302857 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KFU61_RS11120 (2302946) | 2302946..2303692 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| KFU61_RS11125 (2303829) | 2303829..2305874 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| KFU61_RS11130 (2305918) | 2305918..2306436 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| KFU61_RS11140 (2308048) | 2308048..2308440 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| KFU61_RS11145 (2308695) | 2308695..2309584 | + | 890 | Protein_2176 | diguanylate cyclase DgcZ | - |
| KFU61_RS11150 (2309699) | 2309699..2309803 | - | 105 | WP_211180496.1 | protein MgtT | - |
| KFU61_RS11155 (2309803) | 2309803..2309898 | - | 96 | WP_000901367.1 | protein MgtS | - |
| KFU61_RS11160 (2310025) | 2310025..2311212 | - | 1188 | WP_001054183.1 | efflux MFS transporter YdeE | - |
| KFU61_RS11165 (2311407) | 2311407..2312305 | + | 899 | Protein_2180 | O-acetylserine/cysteine exporter | - |
| KFU61_RS11170 (2312336) | 2312336..2312554 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| KFU61_RS11175 (2312586) | 2312586..2312969 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| KFU61_RS11180 (2312989) | 2312989..2313423 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|