MGE detailed information
MGE type: Conjugative plasmid MGE length: 67125 bp
Accession: NZ_CP073769 Location: 1..67125 Organism: Escherichia coli strain SH19PTE6 Replicon: plasmid pYUSHP6-2
Accession: NZ_CP073769 Location: 1..67125 Organism: Escherichia coli strain SH19PTE6 Replicon: plasmid pYUSHP6-2
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KEH54_RS22670 () | 143..391 | + | 249 | WP_000083839.1 | replication regulatory protein RepA | - |
| KEH54_RS22675 () | 636..710 | + | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| KEH54_RS22680 () | 703..1560 | + | 858 | WP_016240488.1 | incFII family plasmid replication initiator RepA | - |
| KEH54_RS22685 () | 2499..3152 | + | 654 | WP_000616807.1 | CPBP family intramembrane metalloprotease | - |
| KEH54_RS22690 () | 3245..3502 | + | 258 | WP_000557619.1 | type II toxin-antitoxin system antitoxin PemI | - |
| KEH54_RS22695 () | 3435..3836 | + | 402 | WP_001398199.1 | type II toxin-antitoxin system toxin endoribonuclease PemK | - |
| KEH54_RS22700 () | 4085..4500 | + | 416 | Protein_6 | IS1 family transposase IS1R | Transposase |
| KEH54_RS22705 () | 4536..5081 | - | 546 | Protein_7 | Tn3 family transposase TnpA_Tn3 | Transposase |
| KEH54_RS22710 () | 5147..5851 | - | 705 | WP_001067855.1 | IS6 family transposase IS26 | Transposase |
| KEH54_RS22715 () | 5986..6081 | + | 96 | WP_013362819.1 | 23S rRNA methyltransferase attenuation leader peptide | - |
| KEH54_RS22720 () | 6207..6944 | + | 738 | WP_013362818.1 | rRNA adenine N-6-methyltransferase | ARG |
| KEH54_RS22730 () | 7707..8404 | + | 698 | WP_095033700.1 | IS1 family transposase IS1R | Transposase |
| KEH54_RS22735 () | 8530..8733 | + | 204 | Protein_12 | hypothetical protein | - |
| KEH54_RS22740 () | 8934..9284 | - | 351 | WP_000361389.1 | plasmid partitioning/stability family protein | - |
| KEH54_RS22745 () | 9287..10249 | - | 963 | WP_000959884.1 | plasmid segregation protein ParM | - |
| KEH54_RS22750 () | 10396..10689 | + | 294 | WP_032146011.1 | hypothetical protein | - |
| KEH54_RS22755 () | 10766..11449 | + | 684 | WP_000085883.1 | DNA methylase | - |
| KEH54_RS22760 () | 11450..11671 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| KEH54_RS22765 () | 11685..12119 | + | 435 | WP_015058992.1 | DUF1380 family protein | - |
| KEH54_RS22770 () | 12164..12934 | + | 771 | WP_015058993.1 | hypothetical protein | - |
| KEH54_RS22775 () | 13347..13772 | + | 426 | WP_001198891.1 | antirestriction protein | - |
| KEH54_RS22780 () | 13819..14241 | + | 423 | WP_000271739.1 | DUF1380 family protein | - |
| KEH54_RS22785 () | 14238..14429 | + | 192 | WP_001027511.1 | hypothetical protein | - |
| KEH54_RS22790 () | 15473..15703 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| KEH54_RS22795 () | 15755..17116 | + | 1362 | WP_000170695.1 | DUF3560 domain-containing protein | - |
| KEH54_RS22800 () | 17163..17726 | + | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| KEH54_RS23745 () | 17812..18267 | - | 456 | Protein_26 | hypothetical protein | - |
| KEH54_RS22805 () | 18569..19096 | + | 528 | WP_000290834.1 | single-stranded DNA-binding protein | - |
| KEH54_RS22810 () | 19154..19387 | + | 234 | WP_000006003.1 | DUF905 family protein | - |
| KEH54_RS22815 () | 19448..21412 | + | 1965 | WP_212480488.1 | ParB/RepB/Spo0J family partition protein | - |
| KEH54_RS22820 () | 21481..21915 | + | 435 | WP_000845953.1 | conjugation system SOS inhibitor PsiB | - |
| KEH54_RS22825 () | 21912..22674 | + | 763 | Protein_31 | plasmid SOS inhibition protein A | - |
| - () | 22643..22867 | + | 225 | NuclAT_0 | - | - |
| - () | 22643..22867 | + | 225 | NuclAT_0 | - | - |
| - () | 22643..22867 | + | 225 | NuclAT_0 | - | - |
| - () | 22643..22867 | + | 225 | NuclAT_0 | - | - |
| KEH54_RS22830 () | 22652..22831 | - | 180 | WP_001309233.1 | hypothetical protein | - |
| - | 22800..22865 | - | 66 | - | - | Antitoxin Detail |
| KEH54_RS23750 () | 22853..23002 | + | 150 | Protein_33 | plasmid maintenance protein Mok | - |
| KEH54_RS22835 () | 22944..23069 | + | 126 | WP_001372321.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| KEH54_RS22840 () | 23370..23666 | - | 297 | Protein_35 | hypothetical protein | - |
| KEH54_RS22845 () | 23966..24262 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| KEH54_RS22850 () | 24373..25194 | + | 822 | WP_001234445.1 | DUF932 domain-containing protein | - |
| KEH54_RS22855 () | 25491..26093 | - | 603 | WP_000243713.1 | hypothetical protein | VF |
| KEH54_RS22860 () | 26416..26799 | + | 384 | WP_001354030.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KEH54_RS22865 () | 26993..27664 | + | 672 | WP_000283561.1 | conjugal transfer transcriptional regulator TraJ | - |
| KEH54_RS22870 () | 27801..28028 | + | 228 | WP_000089263.1 | conjugal transfer relaxosome protein TraY | - |
| KEH54_RS22875 () | 28061..28420 | + | 360 | WP_001098992.1 | type IV conjugative transfer system pilin TraA | - |
| KEH54_RS22880 () | 28435..28746 | + | 312 | WP_000012113.1 | type IV conjugative transfer system protein TraL | - |
| KEH54_RS22885 () | 28768..29334 | + | 567 | WP_000399780.1 | type IV conjugative transfer system protein TraE | - |
| KEH54_RS22890 () | 29321..30049 | + | 729 | WP_001230772.1 | type-F conjugative transfer system secretin TraK | - |
| KEH54_RS22895 () | 30049..31500 | + | 1452 | WP_000146675.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KEH54_RS22900 () | 31490..32056 | + | 567 | WP_000896599.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KEH54_RS22905 () | 32043..32363 | + | 321 | WP_001057307.1 | conjugal transfer protein TrbD | - |
| KEH54_RS22910 () | 32360..32875 | + | 516 | WP_000809881.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KEH54_RS22915 () | 33010..33231 | + | 222 | WP_001278683.1 | conjugal transfer protein TraR | - |
| KEH54_RS22920 () | 33224..33700 | + | 477 | WP_000549587.1 | hypothetical protein | - |
| KEH54_RS22925 () | 33780..33998 | + | 219 | WP_000556745.1 | hypothetical protein | - |
| KEH54_RS22930 () | 34026..34373 | + | 348 | WP_000836682.1 | hypothetical protein | - |
| KEH54_RS22935 () | 34499..37129 | + | 2631 | WP_212480485.1 | type IV secretion system protein TraC | - |
| KEH54_RS22940 () | 37126..37512 | + | 387 | WP_000214084.1 | type-F conjugative transfer system protein TrbI | - |
| KEH54_RS22945 () | 37509..38141 | + | 633 | WP_001203728.1 | type-F conjugative transfer system protein TraW | - |
| KEH54_RS22950 () | 38138..39130 | + | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| KEH54_RS22955 () | 39160..39465 | + | 306 | WP_000224416.1 | hypothetical protein | - |
| KEH54_RS22960 () | 39474..40112 | + | 639 | WP_001080256.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KEH54_RS22965 () | 40109..41958 | + | 1850 | Protein_60 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KEH54_RS22970 () | 41985..42242 | + | 258 | WP_000864353.1 | conjugal transfer protein TrbE | - |
| KEH54_RS22975 () | 42235..42978 | + | 744 | WP_001030371.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KEH54_RS22980 () | 42992..43336 | + | 345 | WP_000556796.1 | conjugal transfer protein TrbA | - |
| KEH54_RS22985 () | 43455..43739 | + | 285 | WP_000624194.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KEH54_RS22990 () | 43726..44271 | + | 546 | WP_000059831.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KEH54_RS22995 () | 44201..44548 | + | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| KEH54_RS23000 () | 44529..44921 | + | 393 | WP_000660699.1 | F-type conjugal transfer protein TrbF | - |
| KEH54_RS23005 () | 44908..46281 | + | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| KEH54_RS23010 () | 46278..49100 | + | 2823 | WP_001007039.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KEH54_RS23015 () | 49116..49601 | + | 486 | WP_000605870.1 | hypothetical protein | - |
| KEH54_RS23025 () | 49650..50380 | + | 731 | Protein_71 | conjugal transfer complement resistance protein TraT | - |
| KEH54_RS23030 () | 50583..51320 | + | 738 | WP_000199905.1 | hypothetical protein | - |
| KEH54_RS23035 () | 51371..53704 | + | 2334 | WP_128882178.1 | Coupling protein TraD | VF |
| KEH54_RS23040 () | 53704..58974 | + | 5271 | WP_117389472.1 | Multifunctional conjugation protein TraI | Relaxase |
| KEH54_RS23045 () | 58994..59740 | + | 747 | WP_059338983.1 | conjugal transfer pilus acetylase TraX | - |
| KEH54_RS23050 () | 59799..60659 | + | 861 | WP_000704523.1 | putative protein YcjY | VF |
| KEH54_RS23055 () | 60762..61322 | + | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| KEH54_RS23060 () | 61451..61663 | + | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| KEH54_RS23065 () | 61908..62369 | + | 462 | WP_001233838.1 | thermonuclease family protein | - |
| KEH54_RS23070 () | 62415..62624 | + | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| KEH54_RS23075 () | 62662..63252 | + | 591 | WP_033807967.1 | DUF2726 domain-containing protein | - |
| KEH54_RS23080 () | 63474..65045 | - | 1572 | WP_000381395.1 | IS66 family transposase ISCro1 | Transposase |
| KEH54_RS23085 () | 65065..65412 | - | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| KEH54_RS23090 () | 65412..66089 | - | 678 | WP_001299364.1 | IS66 family transposase ISCro1 | Transposase |
| KEH54_RS23095 () | 66144..66587 | + | 444 | WP_212480489.1 | hypothetical protein | - |
| - () | 66730..66789 | - | 60 | NuclAT_1 | - | - |
| - () | 66730..66789 | - | 60 | NuclAT_1 | - | - |
| - () | 66730..66789 | - | 60 | NuclAT_1 | - | - |
| - () | 66730..66789 | - | 60 | NuclAT_1 | - | - |
| KEH54_RS23100 () | 66834..66983 | + | 150 | WP_001312851.1 | Hok/Gef family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|