MGE detailed information
MGE type: Prophage MGE length: 66439 bp
Accession: NZ_CP073752 Location: 1703090..1769528 Organism: Clostridioides difficile strain 2015 Replicon: chromosome
Accession: NZ_CP073752 Location: 1703090..1769528 Organism: Clostridioides difficile strain 2015 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KFK07_RS07975 (KFK07_07975) | 1698195..1698956 | + | 762 | WP_009889424.1 | SprT family zinc-dependent metalloprotease | - |
| KFK07_RS07980 (KFK07_07980) | 1699487..1699726 | + | 240 | WP_003429800.1 | ACT domain-containing protein | - |
| KFK07_RS07985 (KFK07_07985) | 1699945..1700991 | + | 1047 | WP_265324588.1 | ketol-acid reductoisomerase | - |
| KFK07_RS07990 (KFK07_07990) | 1701044..1702732 | + | 1689 | WP_009888799.1 | biosynthetic-type acetolactate synthase large subunit | - |
| KFK07_RS07995 (KFK07_07995) | 1703090..1704220 | - | 1131 | WP_003429803.1 | site-specific integrase | - |
| KFK07_RS08000 (KFK07_08000) | 1704299..1705006 | - | 708 | WP_009888800.1 | HIRAN domain-containing protein | - |
| KFK07_RS08005 (KFK07_08005) | 1705019..1705888 | - | 870 | WP_009888801.1 | HipA domain-containing protein | - |
| KFK07_RS08010 (KFK07_08010) | 1706508..1707014 | - | 507 | WP_003429804.1 | ImmA/IrrE family metallo-endopeptidase | - |
| KFK07_RS08015 (KFK07_08015) | 1707090..1707638 | - | 549 | WP_009893126.1 | helix-turn-helix transcriptional regulator | - |
| KFK07_RS08020 (KFK07_08020) | 1707650..1707991 | - | 342 | WP_009888806.1 | XRE family transcriptional regulator | - |
| KFK07_RS08025 (KFK07_08025) | 1708168..1708371 | + | 204 | WP_009893129.1 | helix-turn-helix domain-containing protein | - |
| KFK07_RS08030 (KFK07_08030) | 1708419..1709228 | + | 810 | WP_009888810.1 | phage antirepressor | - |
| KFK07_RS08035 (KFK07_08035) | 1709275..1709484 | + | 210 | WP_009888812.1 | hypothetical protein | - |
| KFK07_RS08040 (KFK07_08040) | 1709494..1709868 | - | 375 | WP_003433505.1 | DUF6173 family protein | - |
| KFK07_RS08045 (KFK07_08045) | 1709971..1710141 | + | 171 | WP_234704199.1 | helix-turn-helix transcriptional regulator | - |
| KFK07_RS08050 (KFK07_08050) | 1710172..1710564 | + | 393 | WP_009888815.1 | helix-turn-helix domain-containing protein | - |
| KFK07_RS08055 (KFK07_08055) | 1710545..1710694 | + | 150 | WP_003429817.1 | hypothetical protein | - |
| KFK07_RS08060 (KFK07_08060) | 1710765..1711202 | + | 438 | WP_003433513.1 | hypothetical protein | - |
| KFK07_RS08065 (KFK07_08065) | 1711214..1712380 | + | 1167 | WP_009888818.1 | DUF2800 domain-containing protein | - |
| KFK07_RS08070 (KFK07_08070) | 1712395..1712730 | + | 336 | WP_009888819.1 | hypothetical protein | - |
| KFK07_RS08075 (KFK07_08075) | 1712783..1713355 | + | 573 | WP_003429822.1 | sigma factor | - |
| KFK07_RS08080 (KFK07_08080) | 1713378..1713950 | + | 573 | WP_003433516.1 | DUF2815 family protein | - |
| KFK07_RS08085 (KFK07_08085) | 1713950..1715908 | + | 1959 | WP_009888821.1 | DNA polymerase | - |
| KFK07_RS08090 (KFK07_08090) | 1715920..1718337 | + | 2418 | WP_009888822.1 | virulence-associated E family protein | - |
| KFK07_RS08095 (KFK07_08095) | 1718619..1718945 | + | 327 | WP_003433522.1 | VRR-NUC domain-containing protein | - |
| KFK07_RS08100 (KFK07_08100) | 1718894..1720264 | + | 1371 | WP_009888823.1 | DEAD/DEAH box helicase | - |
| KFK07_RS08105 (KFK07_08105) | 1720288..1720425 | + | 138 | WP_009888824.1 | hypothetical protein | - |
| KFK07_RS08110 (KFK07_08110) | 1720418..1720897 | + | 480 | WP_009888825.1 | sigma factor-like helix-turn-helix DNA-binding protein | - |
| KFK07_RS08115 (KFK07_08115) | 1721180..1721632 | + | 453 | WP_009888826.1 | phage antirepressor | - |
| KFK07_RS08120 (KFK07_08120) | 1721924..1722898 | + | 975 | WP_009888827.1 | hypothetical protein | - |
| KFK07_RS08125 (KFK07_08125) | 1722919..1723428 | + | 510 | WP_003429834.1 | hypothetical protein | - |
| KFK07_RS08130 (KFK07_08130) | 1723498..1724190 | + | 693 | WP_009888829.1 | phage terminase small subunit | - |
| KFK07_RS08135 (KFK07_08135) | 1724180..1725421 | + | 1242 | WP_009888830.1 | PBSX family phage terminase large subunit | - |
| KFK07_RS08140 (KFK07_08140) | 1725427..1726869 | + | 1443 | WP_009888831.1 | phage portal protein | - |
| KFK07_RS08145 (KFK07_08145) | 1726859..1728394 | + | 1536 | WP_009893134.1 | minor capsid protein | - |
| KFK07_RS08150 (KFK07_08150) | 1728396..1728644 | + | 249 | WP_009888832.1 | hypothetical protein | - |
| KFK07_RS08155 (KFK07_08155) | 1728712..1729275 | + | 564 | WP_009888833.1 | phage scaffolding protein | - |
| KFK07_RS08160 (KFK07_08160) | 1729287..1730177 | + | 891 | WP_009888834.1 | hypothetical protein | - |
| KFK07_RS08165 (KFK07_08165) | 1730196..1730429 | + | 234 | WP_009888835.1 | hypothetical protein | - |
| KFK07_RS08170 (KFK07_08170) | 1730439..1730840 | + | 402 | WP_009888836.1 | hypothetical protein | - |
| KFK07_RS08175 (KFK07_08175) | 1730834..1731181 | + | 348 | WP_003433540.1 | hypothetical protein | - |
| KFK07_RS08180 (KFK07_08180) | 1731181..1731471 | + | 291 | WP_009893135.1 | HK97 gp10 family phage protein | - |
| KFK07_RS08185 (KFK07_08185) | 1731581..1732387 | + | 807 | WP_009888838.1 | hypothetical protein | - |
| KFK07_RS08190 (KFK07_08190) | 1732736..1733173 | + | 438 | WP_009888839.1 | hypothetical protein | - |
| KFK07_RS08195 (KFK07_08195) | 1733166..1733342 | + | 177 | WP_009888840.1 | hypothetical protein | - |
| KFK07_RS08200 (KFK07_08200) | 1733343..1734653 | + | 1311 | WP_009893136.1 | phage tail sheath family protein | - |
| KFK07_RS08205 (KFK07_08205) | 1734670..1735140 | + | 471 | WP_009888842.1 | phage tail tube protein | - |
| KFK07_RS08210 (KFK07_08210) | 1735199..1736026 | + | 828 | WP_009888843.1 | hypothetical protein | - |
| KFK07_RS08215 (KFK07_08215) | 1736098..1736538 | + | 441 | WP_003429853.1 | phage portal protein | - |
| KFK07_RS08220 (KFK07_08220) | 1736879..1737040 | + | 162 | WP_003429855.1 | hypothetical protein | Toxin Detail |
| - | 1736960..1737099 | - | 140 | - | - | Antitoxin Detail |
| KFK07_RS08225 (KFK07_08225) | 1738377..1738565 | + | 189 | WP_003429858.1 | hypothetical protein | - |
| KFK07_RS08230 (KFK07_08230) | 1738684..1739550 | + | 867 | WP_009888845.1 | BRO family protein | - |
| KFK07_RS19430 | 1739603..1739737 | + | 135 | WP_009888846.1 | hypothetical protein | - |
| KFK07_RS08235 (KFK07_08235) | 1740415..1740942 | + | 528 | WP_009888847.1 | DUF4352 domain-containing protein | - |
| KFK07_RS08240 (KFK07_08240) | 1741080..1741847 | + | 768 | WP_009888848.1 | DUF4428 domain-containing protein | - |
| KFK07_RS08245 (KFK07_08245) | 1741913..1744285 | + | 2373 | WP_009893138.1 | tape measure protein | - |
| KFK07_RS08250 (KFK07_08250) | 1744302..1744991 | + | 690 | WP_009888849.1 | LysM peptidoglycan-binding domain-containing protein | - |
| KFK07_RS08255 (KFK07_08255) | 1744984..1746876 | + | 1893 | WP_009893140.1 | NlpC/P60 family protein | - |
| KFK07_RS08260 (KFK07_08260) | 1746890..1747150 | + | 261 | WP_009893142.1 | DUF2577 domain-containing protein | - |
| KFK07_RS08265 (KFK07_08265) | 1747155..1747574 | + | 420 | WP_009888851.1 | DUF2634 domain-containing protein | - |
| KFK07_RS08270 (KFK07_08270) | 1747575..1748624 | + | 1050 | WP_009888852.1 | baseplate J/gp47 family protein | - |
| KFK07_RS08275 (KFK07_08275) | 1748617..1749234 | + | 618 | WP_003433579.1 | YmfQ family protein | - |
| KFK07_RS08280 (KFK07_08280) | 1749246..1750271 | + | 1026 | WP_009888853.1 | phage tail protein | - |
| KFK07_RS08285 (KFK07_08285) | 1750288..1751814 | + | 1527 | WP_009893144.1 | hypothetical protein | - |
| KFK07_RS08290 (KFK07_08290) | 1751829..1752122 | + | 294 | WP_009889429.1 | hypothetical protein | - |
| KFK07_RS08295 (KFK07_08295) | 1752122..1752304 | + | 183 | WP_009889431.1 | hypothetical protein | - |
| KFK07_RS08300 (KFK07_08300) | 1752338..1752904 | + | 567 | WP_009889434.1 | hypothetical protein | - |
| KFK07_RS08305 (KFK07_08305) | 1752935..1753225 | + | 291 | WP_009889435.1 | hypothetical protein | - |
| KFK07_RS08310 (KFK07_08310) | 1753229..1753486 | + | 258 | WP_009889440.1 | phage holin family protein | - |
| KFK07_RS08315 (KFK07_08315) | 1753747..1754610 | + | 864 | WP_003429958.1 | Abi family protein | - |
| KFK07_RS08320 (KFK07_08320) | 1754689..1755501 | + | 813 | WP_009889444.1 | N-acetylmuramoyl-L-alanine amidase | - |
| KFK07_RS08325 (KFK07_08325) | 1755595..1757994 | + | 2400 | WP_009893147.1 | cell wall-binding repeat-containing protein | - |
| KFK07_RS08330 (KFK07_08330) | 1758035..1758220 | - | 186 | WP_003433687.1 | hypothetical protein | - |
| KFK07_RS19435 | 1758449..1758577 | - | 129 | WP_003433683.1 | hypothetical protein | - |
| KFK07_RS08335 (KFK07_08335) | 1758915..1759592 | + | 678 | WP_009889448.1 | manganese catalase family protein | - |
| KFK07_RS08340 (KFK07_08340) | 1759766..1761802 | + | 2037 | WP_009889450.1 | thioredoxin domain-containing protein | - |
| KFK07_RS08345 (KFK07_08345) | 1761993..1762559 | - | 567 | WP_009889452.1 | MarR family transcriptional regulator | - |
| KFK07_RS08350 (KFK07_08350) | 1762843..1763379 | + | 537 | WP_009889454.1 | alpha/beta fold hydrolase | - |
| KFK07_RS08355 (KFK07_08355) | 1764011..1764109 | + | 99 | Protein_1560 | transposase | - |
| KFK07_RS08360 (KFK07_08360) | 1764111..1765229 | + | 1119 | WP_211652099.1 | IS200/IS605 family element RNA-guided endonuclease TnpB | - |
| KFK07_RS08365 (KFK07_08365) | 1765348..1765755 | + | 408 | Protein_1562 | alpha/beta hydrolase | - |
| KFK07_RS08370 (KFK07_08370) | 1766220..1767434 | + | 1215 | WP_009893153.1 | helix-turn-helix transcriptional regulator | - |
| KFK07_RS08375 (KFK07_08375) | 1767854..1768375 | - | 522 | WP_009889468.1 | GNAT family N-acetyltransferase | - |
| KFK07_RS08380 (KFK07_08380) | 1768731..1769528 | + | 798 | WP_003436560.1 | 3D domain-containing protein | - |
| KFK07_RS08385 (KFK07_08385) | 1769638..1770228 | + | 591 | WP_009893156.1 | SGNH/GDSL hydrolase family protein | - |
| KFK07_RS08390 (KFK07_08390) | 1770294..1771991 | + | 1698 | WP_009893157.1 | phospho-sugar mutase | - |
| KFK07_RS08395 (KFK07_08395) | 1772205..1773044 | + | 840 | WP_003436555.1 | YihY/virulence factor BrkB family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|