MGE detailed information
MGE type: Prophage MGE length: 54183 bp
Accession: NZ_CP073624 Location: 2401387..2455569 Organism: Escherichia coli strain AW1.7 Replicon: chromosome
Accession: NZ_CP073624 Location: 2401387..2455569 Organism: Escherichia coli strain AW1.7 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KD735_RS11820 (2397286) | 2397286..2398506 | + | 1221 | WP_000225262.1 | DNA-binding transcriptional repressor Mlc | - |
| KD735_RS11825 (2398631) | 2398631..2399326 | + | 696 | WP_000919231.1 | dethiobiotin synthase | - |
| KD735_RS11830 (2399279) | 2399279..2400571 | - | 1293 | WP_071586743.1 | voltage-gated ClC-type chloride channel ClcB | - |
| KD735_RS11835 (2400730) | 2400730..2401344 | - | 615 | WP_000148706.1 | Tat proofreading chaperone DmsD | - |
| KD735_RS11840 (2401387) | 2401387..2402241 | - | 855 | WP_000526505.1 | dimethyl sulfoxide reductase anchor subunit family protein | - |
| KD735_RS11845 (2402243) | 2402243..2402860 | - | 618 | WP_000213028.1 | dimethylsulfoxide reductase subunit B | - |
| KD735_RS11850 (2402871) | 2402871..2405294 | - | 2424 | WP_072146368.1 | DmsA/YnfE/YnfF family dimethyl sulfoxide reductase | - |
| KD735_RS11855 (2405355) | 2405355..2407664 | - | 2310 | Protein_2310 | dimethyl sulfoxide reductase subunit A | - |
| KD735_RS11860 (2407718) | 2407718..2408686 | - | 969 | WP_077898063.1 | IS5 family transposase | - |
| KD735_RS11865 (2408717) | 2408717..2408902 | - | 186 | Protein_2312 | FlxA-like family protein | - |
| KD735_RS11870 (2409105) | 2409105..2409410 | - | 306 | WP_001326990.1 | protein YdfV | - |
| KD735_RS11875 (2409435) | 2409435..2409674 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| KD735_RS11880 (2409674) | 2409674..2409961 | + | 288 | WP_000323025.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| KD735_RS11885 (2410033) | 2410033..2410188 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| KD735_RS11890 (2410405) | 2410405..2410656 | + | 252 | WP_000980994.1 | protein Rem | - |
| KD735_RS11895 (2410723) | 2410723..2411001 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| KD735_RS11900 (2411003) | 2411003..2412052 | + | 1050 | WP_001265198.1 | DUF968 domain-containing protein | - |
| KD735_RS11905 (2412066) | 2412066..2412818 | + | 753 | WP_001047135.1 | antitermination protein | - |
| KD735_RS11910 (2413096) | 2413096..2413185 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| KD735_RS11915 (2413240) | 2413240..2413452 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| KD735_RS11920 (2413753) | 2413753..2413968 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| KD735_RS11925 (2414332) | 2414332..2414502 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| KD735_RS11930 (2414722) | 2414722..2414937 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| KD735_RS11935 (2414942) | 2414942..2415253 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| KD735_RS11940 (2415250) | 2415250..2415783 | + | 534 | WP_001092971.1 | lysozyme | - |
| KD735_RS11945 (2415780) | 2415780..2416277 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| KD735_RS11950 (2416640) | 2416640..2416852 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| KD735_RS11955 (2416863) | 2416863..2417051 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| KD735_RS11960 (2417054) | 2417054..2417119 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| KD735_RS11965 (2417199) | 2417199..2417354 | + | 156 | WP_001309517.1 | protein YnfN | - |
| KD735_RS11970 (2417526) | 2417526..2417699 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| KD735_RS11975 (2417851) | 2417851..2418261 | - | 411 | WP_054626330.1 | DUF1398 domain-containing protein | - |
| KD735_RS11980 (2418319) | 2418319..2418552 | - | 234 | WP_001368374.1 | YlcI/YnfO family protein | - |
| KD735_RS11985 (2418941) | 2418941..2419486 | + | 546 | WP_000453611.1 | DNA-packaging protein | - |
| KD735_RS11990 (2419461) | 2419461..2421386 | + | 1926 | WP_001027293.1 | phage terminase large subunit family protein | - |
| KD735_RS11995 (2421383) | 2421383..2421589 | + | 207 | WP_000198149.1 | gpW family protein | - |
| KD735_RS12000 (2421586) | 2421586..2423187 | + | 1602 | WP_001529148.1 | phage portal protein | - |
| KD735_RS12005 (2423168) | 2423168..2424487 | + | 1320 | WP_000123311.1 | S49 family peptidase | - |
| KD735_RS12010 (2424497) | 2424497..2424829 | + | 333 | WP_012304872.1 | head decoration protein | - |
| KD735_RS12015 (2424885) | 2424885..2425808 | + | 924 | Protein_2342 | major capsid protein | - |
| KD735_RS12020 (2425903) | 2425903..2428380 | - | 2478 | WP_054622814.1 | phage tail tape measure protein | - |
| KD735_RS12025 (2428413) | 2428413..2429006 | - | 594 | WP_054622813.1 | hypothetical protein | - |
| KD735_RS12030 (2429008) | 2429008..2429622 | - | 615 | WP_054622812.1 | hypothetical protein | - |
| KD735_RS12035 (2429665) | 2429665..2430021 | - | 357 | WP_054622811.1 | Mor transcription activator family protein | - |
| KD735_RS12040 (2430261) | 2430261..2430551 | - | 291 | WP_054622810.1 | hypothetical protein | - |
| KD735_RS12045 (2430548) | 2430548..2431291 | - | 744 | WP_054622809.1 | hypothetical protein | - |
| KD735_RS12050 (2431430) | 2431430..2431621 | + | 192 | WP_054622808.1 | toxin-antitoxin system HicB family antitoxin | - |
| KD735_RS12055 (2431759) | 2431759..2432103 | + | 345 | WP_054622807.1 | hypothetical protein | - |
| KD735_RS12060 (2433084) | 2433084..2433428 | + | 345 | WP_054622806.1 | DUF3486 family protein | - |
| KD735_RS12065 (2433712) | 2433712..2434107 | + | 396 | WP_032318908.1 | DNA-packaging protein FI | - |
| KD735_RS12070 (2434119) | 2434119..2434472 | + | 354 | WP_000753001.1 | head-tail joining protein | - |
| KD735_RS12075 (2434484) | 2434484..2435062 | + | 579 | WP_001541219.1 | phage tail protein | - |
| KD735_RS12080 (2435059) | 2435059..2435454 | + | 396 | WP_000683105.1 | phage minor tail U family protein | - |
| KD735_RS12085 (2435462) | 2435462..2436202 | + | 741 | WP_001528302.1 | phage tail protein | - |
| KD735_RS12090 (2436218) | 2436218..2436640 | + | 423 | WP_000479146.1 | phage minor tail protein G | - |
| KD735_RS12095 (2436622) | 2436622..2437056 | + | 435 | WP_000459458.1 | phage tail assembly protein T | - |
| KD735_RS12100 (2437049) | 2437049..2439610 | + | 2562 | WP_054626332.1 | phage tail tape measure protein | - |
| KD735_RS12105 (2439607) | 2439607..2439936 | + | 330 | WP_000847345.1 | phage tail protein | - |
| KD735_RS12110 (2439936) | 2439936..2440634 | + | 699 | WP_001152619.1 | phage minor tail protein L | - |
| KD735_RS12115 (2440640) | 2440640..2441383 | + | 744 | WP_044723263.1 | C40 family peptidase | - |
| KD735_RS12120 (2441380) | 2441380..2441952 | + | 573 | WP_000847668.1 | tail assembly protein | - |
| KD735_RS12125 (2442013) | 2442013..2444520 | + | 2508 | Protein_2364 | host specificity protein J | - |
| KD735_RS12130 (2444621) | 2444621..2445849 | + | 1229 | WP_211046099.1 | IS3-like element IS2 family transposase | - |
| KD735_RS12135 (2445863) | 2445863..2446828 | + | 966 | Protein_2366 | DUF1983 domain-containing protein | - |
| KD735_RS12140 (2446896) | 2446896..2447495 | + | 600 | WP_001233110.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| KD735_RS12145 (2447560) | 2447560..2450910 | + | 3351 | WP_072188646.1 | prophage tail fiber N-terminal domain-containing protein | - |
| KD735_RS12150 (2450910) | 2450910..2451485 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| KD735_RS12155 (2451583) | 2451583..2452059 | - | 477 | WP_072188601.1 | recombinase family protein | - |
| KD735_RS12165 (2452810) | 2452810..2452950 | - | 141 | Protein_2372 | recombinase family protein | - |
| KD735_RS12170 (2453267) | 2453267..2453500 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| KD735_RS12175 (2453569) | 2453569..2453682 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| KD735_RS12180 (2454286) | 2454286..2455569 | + | 1284 | Protein_2375 | MHS family MFS transporter YdfJ | - |
| KD735_RS12185 (2455658) | 2455658..2457118 | + | 1461 | WP_000527778.1 | mannitol dehydrogenase family protein | - |
| KD735_RS12190 (2457154) | 2457154..2457357 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| KD735_RS12195 (2457534) | 2457534..2458220 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| KD735_RS12200 (2458309) | 2458309..2459055 | - | 747 | WP_001324973.1 | bifunctional NADP-dependent 3-hydroxy acid dehydrogenase/3-hydroxypropionate dehydrogenase YdfG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|