MGE detailed information
MGE type: Conjugative plasmid MGE length: 115443 bp
Accession: NZ_CP073622 Location: 1..115443 Organism: Escherichia coli strain CE2050 Replicon: plasmid pCE2050_A
Accession: NZ_CP073622 Location: 1..115443 Organism: Escherichia coli strain CE2050 Replicon: plasmid pCE2050_A
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KEW59_RS23550 (2556) | 2556..4700 | - | 2145 | WP_000009347.1 | type IV conjugative transfer system coupling protein TraD | - |
| KEW59_RS23555 (4751) | 4751..5488 | - | 738 | WP_129766623.1 | hypothetical protein | - |
| KEW59_RS23560 (5691) | 5691..6422 | - | 732 | WP_000782451.1 | conjugal transfer complement resistance protein TraT | - |
| KEW59_RS23565 (6471) | 6471..6767 | - | 297 | Protein_4 | surface exclusion protein | - |
| KEW59_RS23570 (6916) | 6916..7896 | - | 981 | WP_000019403.1 | IS5 family transposase IS5D | Transposase |
| KEW59_RS23575 (7958) | 7958..8149 | - | 192 | Protein_6 | surface exclusion protein | - |
| KEW59_RS23580 (8171) | 8171..10993 | - | 2823 | WP_001007080.1 | conjugal transfer mating-pair stabilization protein TraG | - |
| KEW59_RS23585 (10990) | 10990..12363 | - | 1374 | WP_000944331.1 | conjugal transfer pilus assembly protein TraH | - |
| KEW59_RS23590 (12350) | 12350..12742 | - | 393 | WP_000660700.1 | F-type conjugal transfer protein TrbF | - |
| KEW59_RS23595 (12723) | 12723..13070 | - | 348 | WP_001309242.1 | P-type conjugative transfer protein TrbJ | - |
| KEW59_RS23600 (13000) | 13000..13545 | - | 546 | WP_000059830.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| KEW59_RS23605 (13532) | 13532..13816 | - | 285 | WP_000624107.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| KEW59_RS23610 (13897) | 13897..14232 | + | 336 | WP_000736414.1 | hypothetical protein | - |
| KEW59_RS23615 (14213) | 14213..14554 | - | 342 | WP_001298557.1 | conjugal transfer protein TrbA | - |
| KEW59_RS23620 (14568) | 14568..15311 | - | 744 | WP_001030385.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| KEW59_RS23625 (15304) | 15304..15561 | - | 258 | WP_000864314.1 | conjugal transfer protein TrbE | - |
| KEW59_RS23630 (15588) | 15588..17438 | - | 1851 | WP_000821859.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| KEW59_RS23635 (17435) | 17435..18073 | - | 639 | WP_001080251.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| KEW59_RS23640 (18082) | 18082..18387 | - | 306 | WP_000224418.1 | hypothetical protein | - |
| KEW59_RS23645 (18417) | 18417..19409 | - | 993 | WP_000830838.1 | conjugal transfer pilus assembly protein TraU | - |
| KEW59_RS23650 (19406) | 19406..20038 | - | 633 | WP_129766625.1 | type-F conjugative transfer system protein TraW | - |
| KEW59_RS23655 (20035) | 20035..20421 | - | 387 | WP_000214082.1 | type-F conjugative transfer system protein TrbI | - |
| KEW59_RS23660 (20418) | 20418..23048 | - | 2631 | WP_129766627.1 | type IV secretion system protein TraC | - |
| KEW59_RS23665 (23415) | 23415..23633 | - | 219 | WP_000556746.1 | hypothetical protein | - |
| KEW59_RS23670 (23713) | 23713..24186 | - | 474 | WP_000549566.1 | hypothetical protein | - |
| KEW59_RS23675 (24179) | 24179..24400 | - | 222 | WP_001278694.1 | conjugal transfer protein TraR | - |
| KEW59_RS23680 (24535) | 24535..25050 | - | 516 | WP_000809889.1 | type IV conjugative transfer system lipoprotein TraV | - |
| KEW59_RS23685 (25047) | 25047..25299 | - | 253 | Protein_28 | conjugal transfer protein TrbG | - |
| KEW59_RS23690 (25292) | 25292..25612 | - | 321 | WP_001057274.1 | conjugal transfer protein TrbD | - |
| KEW59_RS23695 (25599) | 25599..26189 | - | 591 | WP_000002787.1 | conjugal transfer pilus-stabilizing protein TraP | - |
| KEW59_RS23700 (26179) | 26179..27606 | - | 1428 | WP_000146665.1 | F-type conjugal transfer pilus assembly protein TraB | - |
| KEW59_RS23705 (27606) | 27606..28334 | - | 729 | WP_001230787.1 | type-F conjugative transfer system secretin TraK | - |
| KEW59_RS23710 (28321) | 28321..28887 | - | 567 | WP_000399776.1 | type IV conjugative transfer system protein TraE | - |
| KEW59_RS23715 (28909) | 28909..29220 | - | 312 | WP_000012100.1 | type IV conjugative transfer system protein TraL | - |
| KEW59_RS23720 (29235) | 29235..29594 | - | 360 | WP_001098988.1 | type IV conjugative transfer system pilin TraA | - |
| KEW59_RS23725 (29628) | 29628..29855 | - | 228 | WP_001254388.1 | conjugal transfer relaxosome protein TraY | - |
| KEW59_RS23730 (29949) | 29949..30635 | - | 687 | WP_000332487.1 | PAS domain-containing protein | - |
| KEW59_RS23735 (30829) | 30829..31212 | - | 384 | WP_001151562.1 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| KEW59_RS23740 (31543) | 31543..32145 | + | 603 | WP_001323326.1 | hypothetical protein | VF |
| KEW59_RS23745 (32441) | 32441..33262 | - | 822 | WP_001234489.1 | DUF932 domain-containing protein | - |
| KEW59_RS23750 (33381) | 33381..33668 | - | 288 | WP_000107526.1 | hypothetical protein | - |
| KEW59_RS23755 (33969) | 33969..34266 | + | 298 | Protein_42 | hypothetical protein | - |
| KEW59_RS23760 (34584) | 34584..34709 | - | 126 | WP_096937776.1 | type I toxin-antitoxin system Hok family toxin | - |
| KEW59_RS23765 (34651) | 34651..34800 | - | 150 | Protein_44 | DUF5431 family protein | - |
| - (34807) | 34807..35006 | - | 200 | NuclAT_0 | - | - |
| - (34807) | 34807..35006 | - | 200 | NuclAT_0 | - | - |
| - (34807) | 34807..35006 | - | 200 | NuclAT_0 | - | - |
| - (34807) | 34807..35006 | - | 200 | NuclAT_0 | - | - |
| KEW59_RS23770 (34974) | 34974..35737 | - | 764 | Protein_45 | plasmid SOS inhibition protein A | - |
| KEW59_RS23775 (35734) | 35734..36168 | - | 435 | WP_000845910.1 | conjugation system SOS inhibitor PsiB | - |
| KEW59_RS23780 (36223) | 36223..38181 | - | 1959 | WP_001145501.1 | ParB/RepB/Spo0J family partition protein | - |
| KEW59_RS23785 (38240) | 38240..38473 | - | 234 | WP_000006018.1 | DUF905 domain-containing protein | - |
| KEW59_RS23790 (38530) | 38530..39057 | - | 528 | WP_000290833.1 | single-stranded DNA-binding protein | - |
| KEW59_RS23795 (39359) | 39359..39831 | + | 473 | Protein_50 | hypothetical protein | - |
| KEW59_RS23800 (39917) | 39917..40480 | - | 564 | WP_001298559.1 | class I SAM-dependent methyltransferase | - |
| KEW59_RS23805 (40527) | 40527..41888 | - | 1362 | WP_000170671.1 | DUF3560 domain-containing protein | - |
| KEW59_RS23810 (41940) | 41940..42170 | - | 231 | WP_000155844.1 | hypothetical protein | - |
| KEW59_RS23815 (43133) | 43133..43324 | - | 192 | WP_001027516.1 | hypothetical protein | - |
| KEW59_RS23820 (43321) | 43321..43743 | - | 423 | WP_000271708.1 | DUF1380 family protein | - |
| KEW59_RS23825 (43790) | 43790..44215 | - | 426 | WP_001198903.1 | antirestriction protein | - |
| KEW59_RS23830 (44631) | 44631..45401 | - | 771 | WP_001004562.1 | hypothetical protein | - |
| KEW59_RS23835 (45446) | 45446..45964 | - | 519 | WP_223364201.1 | DUF1380 family protein | - |
| KEW59_RS23840 (45894) | 45894..46115 | - | 222 | WP_001104873.1 | hypothetical protein | - |
| KEW59_RS23845 (46116) | 46116..46799 | - | 684 | WP_000086169.1 | DNA methylase | - |
| KEW59_RS23850 (46875) | 46875..47186 | - | 312 | WP_001310011.1 | hypothetical protein | - |
| KEW59_RS23855 (47183) | 47183..47323 | - | 141 | Protein_62 | hypothetical protein | - |
| KEW59_RS23860 (47427) | 47427..48599 | + | 1173 | WP_000952372.1 | IS21 family transposase IS21 | Transposase |
| KEW59_RS23865 (48599) | 48599..49396 | + | 798 | WP_000544830.1 | IS21 family transposase IS21 | Transposase |
| KEW59_RS23870 (49390) | 49390..50220 | - | 831 | WP_001298676.1 | DUF1281 domain-containing protein | - |
| KEW59_RS23875 (50639) | 50639..51859 | - | 1221 | WP_000343766.1 | ISL3 family transposase ISEc53 | Transposase |
| KEW59_RS23880 (51878) | 51878..52396 | - | 519 | WP_000115885.1 | hypothetical protein | VF |
| KEW59_RS23885 (52531) | 52531..52779 | + | 249 | WP_000619112.1 | DinI-like family protein | - |
| KEW59_RS23890 (52776) | 52776..53213 | + | 438 | WP_000109079.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| KEW59_RS23895 (53213) | 53213..54483 | + | 1271 | Protein_70 | translesion error-prone DNA polymerase V subunit UmuC | - |
| KEW59_RS23900 (54488) | 54488..54880 | - | 393 | WP_000340835.1 | plasmid partitioning/stability family protein | - |
| KEW59_RS23905 (54885) | 54885..55856 | - | 972 | WP_001103694.1 | plasmid segregation protein ParM | - |
| KEW59_RS23910 (56085) | 56085..56729 | + | 645 | WP_000633911.1 | AAA family ATPase | - |
| KEW59_RS23915 (56723) | 56723..56998 | + | 276 | WP_000239529.1 | hypothetical protein | - |
| KEW59_RS23920 (57136) | 57136..57945 | - | 810 | WP_000016979.1 | site-specific integrase | - |
| KEW59_RS23925 (57946) | 57946..58251 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| KEW59_RS23930 (58253) | 58253..58471 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| KEW59_RS23935 (60793) | 60793..61434 | + | 642 | WP_000990667.1 | hypothetical protein | - |
| KEW59_RS23940 (62609) | 62609..63586 | + | 978 | WP_001309253.1 | RepB family plasmid replication initiator protein | - |
| KEW59_RS23945 (63829) | 63829..64569 | - | 741 | WP_001066947.1 | IS91 family transposase ISMno23 | Transposase |
| KEW59_RS23950 (64690) | 64690..64878 | - | 189 | WP_001332784.1 | hypothetical protein | - |
| KEW59_RS23955 (65245) | 65245..66414 | + | 1170 | WP_001072358.1 | hypothetical protein | - |
| KEW59_RS23960 (66640) | 66640..66815 | - | 176 | Protein_83 | IS3 family transposase | - |
| KEW59_RS23965 (67261) | 67261..67533 | - | 273 | WP_001322642.1 | adhesin biosynthesis transcription regulatory family protein | - |
| KEW59_RS23970 (68070) | 68070..68494 | - | 425 | Protein_85 | IS3 family transposase IS2 | Transposase |
| KEW59_RS23975 (68776) | 68776..70746 | + | 1971 | WP_001298664.1 | Hemin receptor | VF |
| KEW59_RS23980 (70753) | 70753..71544 | + | 792 | WP_000977394.1 | DUF4198 domain-containing protein | - |
| KEW59_RS23985 (71607) | 71607..72215 | - | 609 | Protein_88 | IS66 family transposase ISEc22 | Transposase |
| KEW59_RS23990 (72283) | 72283..73065 | - | 783 | WP_001300609.1 | IS21 family transposase IS100kyp | Transposase |
| KEW59_RS23995 (73062) | 73062..74084 | - | 1023 | WP_001310017.1 | IS21 family transposase IS100kyp | Transposase |
| KEW59_RS24000 (74170) | 74170..75115 | - | 946 | Protein_91 | IS66 family transposase ISEc8 | Transposase |
| KEW59_RS24005 (75164) | 75164..75511 | - | 348 | WP_000612626.1 | IS66 family transposase ISKpn24 | Transposase |
| KEW59_RS24010 (75508) | 75508..75912 | - | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| KEW59_RS24015 (75992) | 75992..76330 | - | 339 | Protein_94 | IS3 family transposase IS629 | Transposase |
| KEW59_RS24020 (76414) | 76414..77922 | - | 1509 | WP_001189113.1 | group II intron reverse transcriptase/maturase | - |
| KEW59_RS24025 (78595) | 78595..79334 | - | 740 | Protein_96 | IS3 family transposase IS629 | Transposase |
| KEW59_RS24030 (79436) | 79436..79696 | + | 261 | WP_000371882.1 | hypothetical protein | - |
| KEW59_RS24035 (79693) | 79693..80202 | + | 510 | WP_000194542.1 | hypothetical protein | - |
| KEW59_RS24040 (80222) | 80222..80569 | - | 348 | WP_000142452.1 | DUF6404 family protein | - |
| KEW59_RS24045 (80698) | 80698..81033 | + | 336 | WP_001080732.1 | colicin E1 family microcin immunity protein | - |
| KEW59_RS24050 (82485) | 82485..83171 | + | 687 | Protein_101 | replication initiation protein | - |
| KEW59_RS24055 (83503) | 83503..84378 | + | 876 | WP_001224623.1 | ChaN family lipoprotein | - |
| KEW59_RS24060 (84386) | 84386..85162 | + | 777 | WP_000981091.1 | energy transducer TonB | - |
| KEW59_RS24065 (85331) | 85331..87592 | + | 2262 | WP_001100763.1 | TonB-dependent receptor | - |
| KEW59_RS24070 (87661) | 87661..88836 | + | 1176 | WP_001020413.1 | putative protein YncE | VF |
| KEW59_RS24075 (89359) | 89359..89664 | - | 306 | Protein_106 | IS91 family transposase ISSbo1 | Transposase |
| KEW59_RS24080 (89690) | 89690..90093 | + | 404 | Protein_107 | IS3 family transposase IS629 | Transposase |
| KEW59_RS24085 (90158) | 90158..90913 | - | 756 | WP_000065240.1 | IS21 family transposase ISEc10 | Transposase |
| KEW59_RS24090 (90910) | 90910..92409 | - | 1500 | WP_000143800.1 | IS21 family transposase ISEc10 | Transposase |
| KEW59_RS24095 (92495) | 92495..92845 | + | 351 | Protein_110 | IS3 family transposase IS629 | Transposase |
| KEW59_RS24100 (93518) | 93518..93832 | + | 315 | Protein_111 | IS5 family transposase ISKpn26 | Transposase |
| KEW59_RS24105 (93833) | 93833..94006 | + | 174 | Protein_112 | IS5 family transposase ISKpn26 | Transposase |
| KEW59_RS24110 (94156) | 94156..94789 | - | 634 | Protein_113 | histidine-type phosphatase | - |
| KEW59_RS24115 (94911) | 94911..95396 | - | 486 | WP_000874189.1 | hypothetical protein | - |
| KEW59_RS24120 (95421) | 95421..95906 | - | 486 | WP_001267176.1 | TlpA disulfide reductase family protein | - |
| KEW59_RS24125 (95893) | 95893..96588 | - | 696 | WP_000117262.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| KEW59_RS24130 (96593) | 96593..97723 | - | 1131 | WP_000729218.1 | ABC transporter permease | - |
| KEW59_RS24135 (97713) | 97713..98996 | - | 1284 | WP_000964653.1 | ABC transporter permease | - |
| KEW59_RS24140 (98999) | 98999..100378 | - | 1380 | WP_000119836.1 | Fe-S-containing protein | - |
| KEW59_RS24145 (100482) | 100482..101009 | - | 528 | WP_000178050.1 | iron transporter | - |
| KEW59_RS24150 (101050) | 101050..102936 | - | 1887 | WP_001332815.1 | FTR1 family protein | - |
| KEW59_RS24155 (103283) | 103283..104044 | - | 762 | WP_001225378.1 | Na(+)-translocating NADH-quinone reductase subunit C | - |
| KEW59_RS24160 (104281) | 104281..104787 | - | 507 | WP_000949451.1 | protein disulfide oxidoreductase | - |
| KEW59_RS24165 (104777) | 104777..104947 | - | 171 | Protein_124 | DsbA family protein | - |
| KEW59_RS24170 (105034) | 105034..105738 | - | 705 | WP_001067837.1 | IS6 family transposase IS26 | Transposase |
| KEW59_RS24175 (106794) | 106794..107651 | - | 858 | WP_000131004.1 | incFII family plasmid replication initiator RepA | - |
| KEW59_RS24180 (107644) | 107644..107718 | - | 75 | WP_001365705.1 | RepA leader peptide Tap | - |
| KEW59_RS24185 (107951) | 107951..108211 | - | 261 | WP_000078109.1 | replication regulatory protein RepA | - |
| KEW59_RS24190 (108451) | 108451..109041 | - | 591 | WP_000766808.1 | DUF2726 domain-containing protein | - |
| KEW59_RS24195 (109079) | 109079..109288 | - | 210 | WP_001298565.1 | hemolysin expression modulator Hha | - |
| KEW59_RS24200 (109334) | 109334..109795 | - | 462 | WP_001233838.1 | thermonuclease family protein | - |
| KEW59_RS24205 (110040) | 110040..110252 | - | 213 | WP_001309245.1 | ANR family transcriptional regulator | - |
| KEW59_RS24210 (110381) | 110381..110941 | - | 561 | WP_000139321.1 | fertility inhibition protein FinO | - |
| KEW59_RS24215 (111044) | 111044..111904 | - | 861 | WP_000704523.1 | putative protein YcjY | VF |
| KEW59_RS24220 (111963) | 111963..112709 | - | 747 | WP_000205725.1 | conjugal transfer pilus acetylase TraX | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|