MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 79634 bp
Accession: NZ_CP073210 Location: 1..79634 Organism: Xanthomonas citri pv. mangiferaeindicae strain GXG07 Replicon: plasmid pGXG07-1
Accession: NZ_CP073210 Location: 1..79634 Organism: Xanthomonas citri pv. mangiferaeindicae strain GXG07 Replicon: plasmid pGXG07-1
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XCM_RS22220 | 863..1057 | - | 195 | Protein_1 | recombinase family protein | - |
| XCM_RS22225 | 1999..2289 | + | 291 | WP_040279306.1 | hypothetical protein | - |
| XCM_RS22230 (XCM_22060) | 2310..2687 | + | 378 | WP_082329433.1 | TrbC/VirB2 family protein | - |
| XCM_RS22235 (XCM_22065) | 2684..2983 | + | 300 | WP_003490875.1 | VirB3 family type IV secretion system protein | - |
| XCM_RS22240 (XCM_22070) | 3006..5639 | + | 2634 | WP_227072352.1 | Type IV secretion system protein virB4 | VF |
| XCM_RS22245 (XCM_22075) | 5636..6301 | + | 666 | WP_025989478.1 | type IV secretion system protein | - |
| XCM_RS22250 (XCM_22080) | 6353..6565 | + | 213 | WP_017174006.1 | hypothetical protein | - |
| XCM_RS22255 (XCM_22085) | 6558..6965 | + | 408 | WP_047340362.1 | hypothetical protein | - |
| XCM_RS22260 (XCM_22090) | 6953..7819 | + | 867 | WP_047340363.1 | type IV secretion system protein | - |
| XCM_RS22265 (XCM_22095) | 7816..8490 | + | 675 | WP_003490888.1 | type IV secretion system protein | - |
| XCM_RS22270 (XCM_22100) | 8515..9297 | + | 783 | WP_011052985.1 | Type IV secretion system protein virB9 | VF |
| XCM_RS22275 (XCM_22105) | 9299..10519 | + | 1221 | WP_227072353.1 | Type IV secretion system protein virB10 | VF |
| XCM_RS22280 (XCM_22110) | 10530..11552 | + | 1023 | WP_005931776.1 | Type IV secretion system protein VirB11 | VF |
| XCM_RS22285 (XCM_22115) | 11563..12450 | + | 888 | WP_033483242.1 | Type IV secretion system protein virB1 | VF |
| XCM_RS22290 | 12692..12988 | + | 297 | WP_126925283.1 | hypothetical protein | - |
| XCM_RS22295 (XCM_22120) | 13092..13451 | + | 360 | WP_033483239.1 | hypothetical protein | - |
| XCM_RS22300 (XCM_22125) | 13520..14542 | - | 1023 | WP_033483240.1 | ParA family protein | - |
| XCM_RS22305 (XCM_22135) | 14697..15269 | - | 573 | WP_003490825.1 | Tn3 family transposase ISPsy42 | Transposase |
| XCM_RS22310 (XCM_22140) | 15468..15689 | + | 222 | WP_005917854.1 | antitoxin MazE family protein | Antitoxin Detail |
| XCM_RS22315 (XCM_22145) | 15686..16009 | + | 324 | WP_005917856.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XCM_RS22320 (XCM_22150) | 16035..16322 | + | 288 | WP_029220894.1 | hypothetical protein | - |
| XCM_RS22325 (XCM_22155) | 16329..17516 | + | 1188 | WP_003490828.1 | zeta toxin family protein | - |
| XCM_RS22330 (XCM_22160) | 17702..17986 | - | 285 | WP_003490829.1 | hypothetical protein | - |
| XCM_RS22335 (XCM_22165) | 18275..21253 | - | 2979 | WP_126925285.1 | Multifunctional conjugation protein TraI | Relaxase |
| XCM_RS22340 (XCM_22170) | 21267..22841 | - | 1575 | WP_218499876.1 | type IV secretion system DNA-binding domain-containing protein | - |
| XCM_RS22345 | 22982..23323 | - | 342 | WP_078583841.1 | hypothetical protein | - |
| XCM_RS22350 (XCM_22180) | 23522..24142 | - | 621 | WP_078590106.1 | hypothetical protein | - |
| XCM_RS22355 (XCM_22185) | 24250..24645 | - | 396 | WP_039447651.1 | hypothetical protein | - |
| XCM_RS22360 (XCM_22190) | 24995..25441 | + | 447 | WP_033483176.1 | hypothetical protein | - |
| XCM_RS22365 (XCM_22195) | 25438..26145 | + | 708 | WP_078538978.1 | StbB family protein | - |
| XCM_RS22370 (XCM_22200) | 26194..26547 | + | 354 | WP_003490605.1 | hypothetical protein | - |
| XCM_RS22375 (XCM_22205) | 26795..28087 | - | 1293 | WP_033483178.1 | replication initiation protein | - |
| XCM_RS22380 (XCM_22215) | 28754..30055 | + | 1302 | WP_103791269.1 | AAA family ATPase | - |
| XCM_RS22385 (XCM_22220) | 30052..31044 | + | 993 | WP_003490612.1 | ParB/RepB/Spo0J family partition protein | - |
| XCM_RS22390 (XCM_22225) | 31965..32768 | - | 804 | WP_033483179.1 | hypothetical protein | - |
| XCM_RS22395 | 33756..33980 | + | 225 | WP_193589123.1 | hypothetical protein | - |
| XCM_RS22405 | 35210..35416 | - | 207 | WP_227072355.1 | hypothetical protein | - |
| XCM_RS22410 (XCM_22245) | 35509..35871 | + | 363 | Protein_39 | Tn3 family transposase TnpR_TnXo19 | Transposase |
| XCM_RS22415 (XCM_22250) | 35902..36510 | - | 609 | WP_227072356.1 | hypothetical protein | - |
| XCM_RS22420 | 36578..36717 | + | 140 | Protein_41 | IS30 family transposase | - |
| XCM_RS22425 (XCM_22255) | 36780..37301 | + | 522 | WP_082329646.1 | hypothetical protein | - |
| XCM_RS22430 (XCM_22260) | 37942..38427 | - | 486 | WP_040238658.1 | hypothetical protein | - |
| XCM_RS22435 | 38459..38683 | - | 225 | Protein_44 | hypothetical protein | - |
| XCM_RS22440 (XCM_22265) | 38715..39539 | - | 825 | WP_164675131.1 | IS3 family transposase ISKpn40 | Transposase |
| XCM_RS22445 (XCM_22270) | 39871..40173 | + | 303 | WP_039582911.1 | type II toxin-antitoxin system HigB family toxin | - |
| XCM_RS22450 (XCM_22275) | 40175..40534 | + | 360 | WP_039582917.1 | transcriptional regulator | - |
| XCM_RS22945 | 40531..40656 | - | 126 | WP_256723411.1 | hypothetical protein | - |
| XCM_RS22455 (XCM_22280) | 40873..41217 | - | 345 | Protein_49 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| XCM_RS22460 (XCM_22285) | 41464..44856 | + | 3393 | WP_227072346.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCM_RS22465 (XCM_22290) | 45540..45776 | - | 237 | Protein_51 | hypothetical protein | - |
| XCM_RS22470 (XCM_22295) | 46132..46716 | - | 585 | WP_227072347.1 | DUF6012 family protein | - |
| XCM_RS22480 (XCM_22310) | 48500..48781 | - | 282 | WP_019238166.1 | helix-turn-helix domain-containing protein | - |
| XCM_RS22485 (XCM_22315) | 48778..49116 | - | 339 | WP_019238165.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| XCM_RS22490 | 49468..49677 | + | 210 | WP_170914380.1 | helix-turn-helix transcriptional regulator | - |
| XCM_RS22495 (XCM_22320) | 49767..50771 | + | 1005 | WP_003491266.1 | Putative conjugal transfer protein | VF |
| XCM_RS22500 (XCM_22335) | 51018..52105 | + | 1088 | WP_103791178.1 | IS3 family transposase ISXac2 | Transposase |
| XCM_RS22505 | 52169..52246 | + | 78 | WP_241428341.1 | hypothetical protein | - |
| XCM_RS22510 (XCM_22340) | 52470..56270 | + | 3801 | WP_227072348.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCM_RS22515 | 56604..56810 | - | 207 | WP_226690116.1 | hypothetical protein | - |
| XCM_RS22520 (XCM_22355) | 57492..58717 | + | 1226 | WP_104039335.1 | IS3 family transposase ISJsp1 | Transposase |
| XCM_RS22525 (XCM_22360) | 59125..60297 | + | 1173 | WP_042841551.1 | lipase family protein | - |
| XCM_RS22530 | 60511..60801 | + | 291 | Protein_64 | transposase | - |
| XCM_RS22535 (XCM_22365) | 60782..61090 | - | 309 | WP_139370808.1 | hypothetical protein | - |
| XCM_RS22540 (XCM_22370) | 61374..64868 | + | 3495 | WP_227072349.1 | type III secretion system effector avirulence protein AvrBs3 | - |
| XCM_RS22545 (XCM_22375) | 64976..65344 | - | 369 | Protein_67 | Tn3 family transposase TnpA_TnXax1 | Transposase |
| XCM_RS22550 (XCM_22380) | 65462..66124 | - | 663 | WP_078538701.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| XCM_RS22555 (XCM_22385) | 66261..67184 | - | 924 | WP_012477429.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| XCM_RS22560 (XCM_22390) | 67398..67637 | + | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| XCM_RS22565 (XCM_22395) | 67637..68056 | + | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| XCM_RS22570 (XCM_22400) | 68061..71036 | + | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| XCM_RS22575 (XCM_22405) | 71055..71753 | + | 699 | WP_005918428.1 | YecA family protein | - |
| XCM_RS22950 | 71680..72411 | + | 732 | WP_281064729.1 | XopAF/AvrXv3 family type III secretion system effector | - |
| XCM_RS22585 (XCM_22410) | 72532..72732 | - | 201 | WP_005934416.1 | IS66 family transposase ISAzo15 | Transposase |
| XCM_RS22590 (XCM_22415) | 73147..73413 | + | 267 | WP_003486912.1 | IS3 family transposase ISXac4 | Transposase |
| XCM_RS22595 (XCM_22420) | 73437..74198 | + | 762 | WP_226690038.1 | IS3 family transposase ISXac4 | Transposase |
| XCM_RS22605 (XCM_22435) | 75331..75474 | - | 144 | WP_139370770.1 | IS66 family insertion sequence element accessory protein TnpB | - |
| XCM_RS22610 (XCM_22440) | 75468..75770 | - | 303 | WP_226690040.1 | IS66 family transposase ISDpr4 | Transposase |
| XCM_RS22615 | 75937..76029 | + | 93 | Protein_81 | avirulence protein | - |
| XCM_RS22620 (XCM_22445) | 76082..76519 | - | 438 | Protein_82 | Tn3 family transposase ISPsy42 | Transposase |
| XCM_RS22625 | 76521..76715 | + | 195 | Protein_83 | IS5/IS1182 family transposase | - |
| XCM_RS22630 | 77511..77669 | - | 159 | Protein_84 | avirulence protein | - |
| XCM_RS22635 (XCM_22450) | 77744..78136 | - | 393 | WP_029996465.1 | hypothetical protein | - |
| XCM_RS22640 (XCM_22455) | 78283..78612 | + | 330 | WP_005918642.1 | hypothetical protein | - |
| XCM_RS22645 | 78662..78868 | + | 207 | WP_011052961.1 | hypothetical protein | - |
| XCM_RS22650 | 78922..79329 | + | 408 | WP_227072351.1 | transposase | - |
| XCM_RS22215 (XCM_22045) | 79339..79634 | + | 296 | WP_087942126.1 | IS3 family transposase ISXc8 | Transposase |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|