MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 89324 bp
Accession: NZ_CP073116 Location: 413356..502679 Organism: Neisseria subflava strain TT0073 Replicon: chromosome
Accession: NZ_CP073116 Location: 413356..502679 Organism: Neisseria subflava strain TT0073 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KCG56_RS01840 (KCG56_01850) | 408740..409702 | + | 963 | WP_254321711.1 | D-glycero-beta-D-manno-heptose-7-phosphate kinase | - |
| KCG56_RS01845 (KCG56_01855) | 409842..410846 | + | 1005 | WP_049348399.1 | ADP-glyceromanno-heptose 6-epimerase | - |
| KCG56_RS01850 (KCG56_01860) | 410946..411389 | - | 444 | WP_254321712.1 | hypothetical protein | - |
| KCG56_RS01855 (KCG56_01865) | 411772..412860 | - | 1089 | WP_254321713.1 | arylsulfatase | - |
| KCG56_RS01860 (KCG56_01870) | 413588..414226 | + | 639 | WP_254321714.1 | lytic transglycosylase domain-containing protein | - |
| KCG56_RS01865 (KCG56_01875) | 414296..414598 | + | 303 | WP_254321715.1 | hypothetical protein | - |
| KCG56_RS01870 | 414626..415057 | + | 432 | WP_254321716.1 | VirB3 family type IV secretion system protein | - |
| KCG56_RS01875 (KCG56_01880) | 414957..417371 | + | 2415 | WP_254321717.1 | Type IV secretion system protein virB4 | VF |
| KCG56_RS01880 (KCG56_01885) | 417398..418126 | + | 729 | WP_254321718.1 | Type IV secretion system protein virB5 | VF |
| KCG56_RS01885 (KCG56_01890) | 418189..418872 | + | 684 | WP_254321719.1 | type IV secretion system protein | - |
| KCG56_RS01890 (KCG56_01895) | 419126..419317 | + | 192 | WP_128582986.1 | hypothetical protein | - |
| KCG56_RS01895 (KCG56_01900) | 419336..419830 | + | 495 | WP_254321720.1 | hypothetical protein | - |
| KCG56_RS01900 (KCG56_01905) | 420022..420726 | + | 705 | WP_254321721.1 | Type IV secretion system protein virB8 | VF |
| KCG56_RS01905 (KCG56_01910) | 420778..421587 | + | 810 | Protein_370 | Type IV secretion system protein virB9 | VF |
| KCG56_RS01910 (KCG56_01915) | 421584..422282 | + | 699 | WP_254321722.1 | hypothetical protein | - |
| KCG56_RS01915 (KCG56_01920) | 422327..422914 | + | 588 | WP_254321723.1 | Type IV secretion system protein virB10 | VF |
| KCG56_RS01920 (KCG56_01925) | 422968..424095 | + | 1128 | WP_254321724.1 | Type IV secretion system protein VirB11 | VF |
| KCG56_RS01925 (KCG56_01930) | 424105..424539 | + | 435 | WP_254321725.1 | single-stranded DNA-binding protein | - |
| KCG56_RS01930 (KCG56_01935) | 424674..426554 | + | 1881 | WP_254321726.1 | Protein VirD4 | VF |
| KCG56_RS01935 (KCG56_01940) | 426618..429191 | + | 2574 | WP_254321727.1 | PriCT-2 domain-containing protein | - |
| KCG56_RS01940 (KCG56_01945) | 429201..429407 | + | 207 | WP_049323736.1 | hypothetical protein | - |
| KCG56_RS01945 | 429463..430715 | + | 1253 | Protein_378 | zincin-like metallopeptidase domain-containing protein | - |
| KCG56_RS01950 (KCG56_01960) | 430769..431314 | + | 546 | WP_225905455.1 | plasmid mobilization relaxosome protein MobC | - |
| KCG56_RS01955 (KCG56_01965) | 431325..432388 | + | 1064 | Protein_380 | traS protein | - |
| KCG56_RS01960 (KCG56_01970) | 432642..433436 | + | 795 | WP_254321728.1 | hypothetical protein | - |
| KCG56_RS01965 (KCG56_01975) | 434234..434608 | + | 375 | WP_254321729.1 | hypothetical protein | - |
| KCG56_RS01970 (KCG56_01980) | 434622..434984 | + | 363 | WP_254321730.1 | hypothetical protein | - |
| KCG56_RS01975 (KCG56_01985) | 434999..435430 | + | 432 | WP_254321731.1 | protein-export chaperone SecB | - |
| KCG56_RS01980 (KCG56_01990) | 435554..436336 | + | 783 | Protein_385 | IS5 family transposase IS1106 | Transposase |
| KCG56_RS01985 (KCG56_01995) | 436672..437346 | + | 675 | WP_254321732.1 | Fic family protein | - |
| KCG56_RS01990 (KCG56_02000) | 437355..437981 | + | 627 | WP_254321733.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| KCG56_RS01995 (KCG56_02005) | 437984..438199 | + | 216 | WP_225905456.1 | hypothetical protein | - |
| KCG56_RS02000 (KCG56_02010) | 438478..439451 | - | 974 | Protein_389 | IS5 family transposase ISNme1 | Transposase |
| KCG56_RS02005 (KCG56_02015) | 439779..448039 | + | 8261 | Protein_390 | tRNA nuclease CdiA-2 | VF |
| KCG56_RS02010 (KCG56_02025) | 448029..448658 | + | 630 | WP_254322202.1 | hypothetical protein | - |
| KCG56_RS02015 | 448858..451373 | + | 2516 | Protein_392 | hemagglutinin repeat-containing protein | - |
| KCG56_RS02020 (KCG56_02040) | 451375..451833 | + | 459 | WP_254321734.1 | hypothetical protein | - |
| KCG56_RS02025 (KCG56_02045) | 451830..452240 | + | 411 | WP_254321735.1 | hypothetical protein | - |
| KCG56_RS02030 (KCG56_02050) | 452718..453211 | + | 494 | Protein_395 | contact-dependent growth inhibition system immunity protein | - |
| KCG56_RS02035 (KCG56_02055) | 453369..453995 | + | 627 | WP_254321736.1 | hypothetical protein | - |
| KCG56_RS02040 (KCG56_02060) | 454253..456052 | - | 1800 | WP_254321737.1 | ShlB/FhaC/HecB family hemolysin secretion/activation protein | - |
| KCG56_RS02045 | 456350..456694 | - | 345 | WP_254321738.1 | hypothetical protein | - |
| KCG56_RS02050 (KCG56_02070) | 457062..457616 | - | 555 | WP_254322203.1 | hypothetical protein | - |
| KCG56_RS02055 (KCG56_02075) | 457634..458422 | - | 789 | WP_254321739.1 | N-6 DNA methylase | - |
| KCG56_RS02060 (KCG56_02080) | 458476..458874 | - | 399 | WP_254321740.1 | phosphoglycerate kinase | - |
| KCG56_RS02065 (KCG56_02085) | 459582..459914 | + | 333 | WP_254321741.1 | hypothetical protein | - |
| KCG56_RS02070 (KCG56_02090) | 460055..460828 | - | 774 | WP_254321742.1 | DNA adenine methylase | - |
| KCG56_RS02075 (KCG56_02095) | 460801..460977 | - | 177 | WP_254322204.1 | Com family DNA-binding transcriptional regulator | - |
| KCG56_RS02080 (KCG56_02100) | 461157..461582 | - | 426 | WP_254321743.1 | hypothetical protein | - |
| KCG56_RS02085 (KCG56_02105) | 461650..462420 | - | 771 | WP_254321744.1 | hypothetical protein | - |
| KCG56_RS02090 (KCG56_02110) | 462453..463241 | - | 789 | WP_254321745.1 | phage tail protein | - |
| KCG56_RS02095 (KCG56_02115) | 463259..463975 | - | 717 | WP_254321746.1 | hypothetical protein | - |
| KCG56_RS02100 (KCG56_02120) | 463975..464553 | - | 579 | WP_254321747.1 | phage tail protein | - |
| KCG56_RS02105 (KCG56_02125) | 464557..465699 | - | 1143 | WP_254321748.1 | baseplate J/gp47 family protein | - |
| KCG56_RS02110 (KCG56_02130) | 465690..466067 | - | 378 | WP_254321749.1 | GPW/gp25 family protein | - |
| KCG56_RS02115 (KCG56_02135) | 466146..466772 | - | 627 | WP_254321750.1 | phage baseplate assembly protein V | - |
| KCG56_RS02120 (KCG56_02140) | 466738..467837 | - | 1100 | Protein_413 | contractile injection system protein, VgrG/Pvc8 family | - |
| KCG56_RS02125 (KCG56_02145) | 467848..468066 | - | 219 | WP_049332801.1 | tail protein X | - |
| KCG56_RS02130 (KCG56_02150) | 468063..468959 | - | 897 | WP_254321751.1 | phage tail protein | - |
| KCG56_RS02135 | 468959..470002 | - | 1044 | WP_254321752.1 | hypothetical protein | - |
| KCG56_RS02140 | 469939..471387 | - | 1449 | WP_254321753.1 | phage tail tape measure protein | - |
| KCG56_RS02145 (KCG56_02160) | 471431..471706 | + | 276 | WP_254321754.1 | hypothetical protein | - |
| KCG56_RS02150 | 471703..471846 | - | 144 | WP_254321755.1 | GpE family phage tail protein | - |
| KCG56_RS02155 (KCG56_02170) | 471869..472165 | - | 297 | WP_049322394.1 | phage tail assembly protein | - |
| KCG56_RS02160 (KCG56_02175) | 472268..472783 | - | 516 | WP_254321756.1 | phage major tail tube protein | - |
| KCG56_RS02165 (KCG56_02180) | 472795..474189 | - | 1395 | WP_254321757.1 | phage tail sheath subtilisin-like domain-containing protein | - |
| KCG56_RS02170 (KCG56_02185) | 474189..474692 | - | 504 | WP_254321758.1 | Gp37 family protein | - |
| KCG56_RS02175 (KCG56_02190) | 474695..475123 | - | 429 | WP_254321759.1 | DUF1320 domain-containing protein | - |
| KCG56_RS02180 (KCG56_02195) | 475123..475389 | - | 267 | WP_254321760.1 | hypothetical protein | - |
| KCG56_RS02185 (KCG56_02200) | 475392..475724 | - | 333 | WP_254321761.1 | DUF2190 family protein | - |
| KCG56_RS02190 (KCG56_02205) | 475725..475991 | - | 267 | WP_049322387.1 | Gp49 family protein | - |
| KCG56_RS02195 (KCG56_02210) | 476037..476972 | - | 936 | WP_107976301.1 | hypothetical protein | - |
| KCG56_RS02200 (KCG56_02215) | 477019..478152 | - | 1134 | WP_254321762.1 | 2-oxoacid:acceptor oxidoreductase | - |
| KCG56_RS02205 (KCG56_02220) | 478368..478712 | - | 345 | WP_079453739.1 | Mor transcription activator family protein | - |
| KCG56_RS02210 (KCG56_02225) | 478705..479184 | - | 480 | WP_254321763.1 | regulatory protein GemA | - |
| KCG56_RS02215 (KCG56_02230) | 479333..479608 | - | 276 | WP_254321764.1 | HU family DNA-binding protein | - |
| KCG56_RS02220 (KCG56_02235) | 479658..479855 | - | 198 | WP_254321765.1 | hypothetical protein | - |
| KCG56_RS02225 (KCG56_02240) | 479858..480469 | - | 612 | WP_254321766.1 | DUF3164 family protein | - |
| KCG56_RS02230 (KCG56_02245) | 480466..480924 | - | 459 | WP_254321767.1 | hypothetical protein | - |
| KCG56_RS02235 (KCG56_02250) | 480908..481408 | - | 501 | WP_254321768.1 | hypothetical protein | - |
| KCG56_RS02240 (KCG56_02255) | 481405..481692 | - | 288 | WP_254321769.1 | hypothetical protein | - |
| KCG56_RS02245 (KCG56_02260) | 481689..481883 | - | 195 | WP_049322378.1 | hypothetical protein | - |
| KCG56_RS02250 (KCG56_02265) | 481880..482056 | - | 177 | WP_254321770.1 | hypothetical protein | - |
| KCG56_RS02255 (KCG56_02270) | 482053..482193 | - | 141 | WP_254321771.1 | hypothetical protein | - |
| KCG56_RS02260 (KCG56_02275) | 482204..482437 | - | 234 | WP_254321772.1 | hypothetical protein | - |
| KCG56_RS02265 (KCG56_02280) | 482439..483584 | - | 1146 | WP_254321773.1 | AAA family ATPase | - |
| KCG56_RS02270 (KCG56_02285) | 483625..485403 | - | 1779 | WP_254321774.1 | hypothetical protein ; Integrase | Integrase |
| KCG56_RS02275 (KCG56_02290) | 485407..486249 | - | 843 | WP_254321775.1 | DUF3102 domain-containing protein | - |
| KCG56_RS02280 (KCG56_02295) | 486334..486618 | - | 285 | WP_254321776.1 | DNA-binding protein | - |
| KCG56_RS02285 (KCG56_02300) | 486618..486818 | - | 201 | WP_070822343.1 | DNA-binding protein | - |
| KCG56_RS02290 (KCG56_02305) | 486960..487631 | + | 672 | WP_254321777.1 | XRE family transcriptional regulator | - |
| KCG56_RS02295 (KCG56_02310) | 487644..488258 | + | 615 | WP_254321778.1 | hypothetical protein | - |
| KCG56_RS02300 (KCG56_02315) | 488320..489399 | + | 1080 | WP_254321779.1 | nucleoid-associated protein | - |
| KCG56_RS02305 (KCG56_02320) | 489396..490403 | + | 1008 | WP_254321780.1 | hypothetical protein | - |
| KCG56_RS02310 (KCG56_02325) | 490476..490979 | + | 504 | WP_254321781.1 | glycoside hydrolase family 108 protein | - |
| KCG56_RS02315 (KCG56_02330) | 490993..491166 | + | 174 | WP_049322420.1 | hypothetical protein | - |
| KCG56_RS02320 (KCG56_02335) | 491091..491420 | + | 330 | WP_254321782.1 | hypothetical protein | - |
| KCG56_RS02325 (KCG56_02340) | 491404..491799 | + | 396 | WP_049322367.1 | hypothetical protein | - |
| KCG56_RS02330 (KCG56_02345) | 491780..491998 | + | 219 | WP_049322366.1 | hypothetical protein | - |
| KCG56_RS02335 (KCG56_02350) | 491991..492200 | + | 210 | WP_049332755.1 | TraR/DksA family transcriptional regulator | - |
| KCG56_RS02340 (KCG56_02355) | 492203..492523 | + | 321 | WP_049332753.1 | hypothetical protein | - |
| KCG56_RS02345 (KCG56_02360) | 492520..492837 | + | 318 | WP_254321783.1 | hypothetical protein | - |
| KCG56_RS02350 (KCG56_02365) | 492840..493385 | + | 546 | WP_049322363.1 | DUF3486 family protein | - |
| KCG56_RS02355 (KCG56_02370) | 493382..494896 | + | 1515 | WP_254321784.1 | hypothetical protein | - |
| KCG56_RS02360 (KCG56_02375) | 494918..496390 | + | 1473 | WP_254321785.1 | DUF935 family protein | - |
| KCG56_RS02365 (KCG56_02380) | 496390..497295 | + | 906 | WP_254321786.1 | phage minor head protein | - |
| KCG56_RS02370 (KCG56_02385) | 497298..497738 | + | 441 | WP_254321787.1 | phage virion morphogenesis protein | - |
| KCG56_RS02375 (KCG56_02390) | 497991..498254 | - | 264 | WP_254321788.1 | Txe/YoeB family addiction module toxin | Toxin Detail |
| KCG56_RS02380 (KCG56_02395) | 498251..498499 | - | 249 | WP_223169026.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin Detail |
| KCG56_RS02385 (KCG56_02400) | 498855..499022 | + | 168 | WP_164836862.1 | hypothetical protein | - |
| KCG56_RS02390 (KCG56_02405) | 499134..499532 | + | 399 | WP_254321789.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KCG56_RS02395 | 499474..499686 | + | 213 | WP_254321790.1 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| KCG56_RS02400 (KCG56_02410) | 499837..500616 | + | 780 | WP_254321791.1 | conjugal transfer protein TraL | - |
| KCG56_RS02405 (KCG56_02415) | 500598..501032 | + | 435 | WP_254321792.1 | hypothetical protein | - |
| KCG56_RS02410 (KCG56_02420) | 501301..501627 | + | 327 | WP_254321793.1 | helix-turn-helix domain-containing protein | - |
| KCG56_RS02415 (KCG56_02425) | 501549..502523 | + | 975 | WP_254322205.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KCG56_RS02460 (KCG56_02470) | 503498..504058 | - | 561 | WP_254322206.1 | CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase | - |
| KCG56_RS02465 (KCG56_02480) | 504736..505302 | - | 567 | WP_254321794.1 | FixH family protein | - |
| KCG56_RS02470 (KCG56_02485) | 505308..506792 | - | 1485 | WP_254321795.1 | cytochrome c oxidase accessory protein CcoG | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|