MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 88995 bp
Accession: NZ_CP073080 Location: 5837126..5926120 Organism: Pseudomonas aeruginosa strain NDTH9845 Replicon: chromosome
Accession: NZ_CP073080 Location: 5837126..5926120 Organism: Pseudomonas aeruginosa strain NDTH9845 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KCG38_RS27330 (KCG38_27330) | 5832645..5836897 | + | 4253 | Protein_5429 | two-partner secretion system exoprotein TpsA4 | - |
| KCG38_RS27335 (KCG38_27335) | 5837264..5838124 | + | 861 | WP_023082029.1 | ParA family protein | - |
| KCG38_RS27340 (KCG38_27340) | 5838126..5838854 | + | 729 | WP_025298022.1 | hypothetical protein | - |
| KCG38_RS27345 (KCG38_27345) | 5838851..5839348 | + | 498 | WP_128709434.1 | hypothetical protein | - |
| KCG38_RS36245 | 5839345..5840496 | + | 1152 | WP_023108755.1 | Lar family restriction alleviation protein | - |
| KCG38_RS27360 (KCG38_27360) | 5840496..5841197 | + | 702 | WP_023082648.1 | DUF2786 domain-containing protein | - |
| KCG38_RS27365 (KCG38_27365) | 5841194..5841901 | + | 708 | WP_023082649.1 | HNH endonuclease signature motif containing protein | - |
| KCG38_RS27370 (KCG38_27370) | 5841885..5842109 | + | 225 | WP_009315888.1 | hypothetical protein | - |
| KCG38_RS27375 (KCG38_27375) | 5842106..5843449 | + | 1344 | WP_023082650.1 | replicative DNA helicase | - |
| KCG38_RS27380 (KCG38_27380) | 5843888..5844334 | - | 447 | WP_003117028.1 | hypothetical protein | - |
| KCG38_RS27385 (KCG38_27385) | 5845269..5845706 | - | 438 | WP_003157043.1 | hypothetical protein | - |
| KCG38_RS27390 (KCG38_27390) | 5845884..5846069 | + | 186 | WP_003157042.1 | hypothetical protein | - |
| KCG38_RS27395 (KCG38_27395) | 5846059..5846586 | + | 528 | WP_003448815.1 | hypothetical protein | - |
| KCG38_RS27400 (KCG38_27400) | 5846583..5846840 | + | 258 | WP_003448812.1 | hypothetical protein | - |
| KCG38_RS27405 (KCG38_27405) | 5846833..5847072 | + | 240 | WP_023082652.1 | hypothetical protein | - |
| KCG38_RS27410 (KCG38_27410) | 5847065..5847298 | + | 234 | WP_003103841.1 | hypothetical protein | - |
| KCG38_RS27415 (KCG38_27415) | 5847298..5848320 | + | 1023 | WP_010792224.1 | nucleoid-associated protein YejK | - |
| KCG38_RS27420 (KCG38_27420) | 5848317..5849207 | + | 891 | WP_025298026.1 | DNA adenine methylase | - |
| KCG38_RS27425 (KCG38_27425) | 5849228..5849497 | + | 270 | WP_012076847.1 | Arc family DNA-binding protein | - |
| KCG38_RS27430 (KCG38_27430) | 5849494..5851227 | + | 1734 | WP_031637209.1 | ParB family protein | - |
| KCG38_RS27435 (KCG38_27435) | 5851255..5852010 | + | 756 | WP_012076849.1 | DUF2857 domain-containing protein | - |
| KCG38_RS27440 (KCG38_27440) | 5852013..5853338 | + | 1326 | WP_031637207.1 | STY4528 family pathogenicity island replication protein | - |
| KCG38_RS27445 (KCG38_27445) | 5853879..5854049 | + | 171 | WP_024100016.1 | hypothetical protein | - |
| KCG38_RS27450 (KCG38_27450) | 5854206..5854934 | + | 729 | WP_023082037.1 | TIGR03761 family integrating conjugative element protein | - |
| KCG38_RS27455 (KCG38_27455) | 5854940..5855488 | + | 549 | WP_023082038.1 | DUF3158 family protein | - |
| KCG38_RS27460 (KCG38_27460) | 5855536..5856378 | + | 843 | WP_023082039.1 | Rha family transcriptional regulator | - |
| KCG38_RS27465 (KCG38_27465) | 5856408..5856896 | + | 489 | WP_023082040.1 | single-stranded DNA-binding protein | - |
| KCG38_RS27470 (KCG38_27470) | 5857004..5857357 | + | 354 | WP_003120979.1 | helix-turn-helix transcriptional regulator | - |
| KCG38_RS27475 (KCG38_27475) | 5857477..5857644 | + | 168 | WP_128729268.1 | CrpP family ICE-associated protein | - |
| KCG38_RS27480 (KCG38_27480) | 5857759..5859678 | + | 1920 | WP_211851994.1 | type I DNA topoisomerase | - |
| KCG38_RS27485 (KCG38_27485) | 5859692..5860438 | + | 747 | WP_235195578.1 | hypothetical protein | - |
| KCG38_RS27490 (KCG38_27490) | 5860739..5862628 | + | 1890 | WP_211851996.1 | hypothetical protein | - |
| KCG38_RS27495 (KCG38_27495) | 5862625..5864601 | + | 1977 | WP_016851611.1 | DEAD/DEAH box helicase | - |
| KCG38_RS36380 | 5864611..5864745 | + | 135 | WP_255253641.1 | hypothetical protein | - |
| KCG38_RS27500 (KCG38_27500) | 5864742..5865086 | + | 345 | WP_016851612.1 | hypothetical protein | - |
| KCG38_RS27505 (KCG38_27505) | 5865157..5865447 | - | 291 | WP_003448662.1 | putative addiction module antidote protein | Antitoxin Detail |
| KCG38_RS27510 (KCG38_27510) | 5865444..5865743 | - | 300 | WP_003120987.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| KCG38_RS27515 (KCG38_27515) | 5865945..5867069 | + | 1125 | WP_012076859.1 | hypothetical protein | VF |
| KCG38_RS27520 (KCG38_27520) | 5867069..5868778 | + | 1710 | WP_012076860.1 | Outer membrane lipoprotein BfpB | VF |
| KCG38_RS27525 (KCG38_27525) | 5868782..5870107 | + | 1326 | WP_003099758.1 | type 4b pilus protein PilO2 | - |
| KCG38_RS27530 (KCG38_27530) | 5870097..5870630 | + | 534 | WP_003099760.1 | type IV pilus biogenesis protein PilP | - |
| KCG38_RS27535 (KCG38_27535) | 5870639..5872219 | + | 1581 | WP_003099761.1 | Toxin coregulated pilus biosynthesis protein T | VF |
| KCG38_RS27540 (KCG38_27540) | 5872219..5873298 | + | 1080 | WP_003109360.1 | Toxin coregulated pilus biosynthesis protein E | VF |
| KCG38_RS27545 (KCG38_27545) | 5873320..5873850 | + | 531 | WP_003099765.1 | hypothetical protein | VF |
| KCG38_RS27550 (KCG38_27550) | 5873847..5874803 | + | 957 | WP_023093675.1 | ATPase, T2SS/T4P/T4SS family | - |
| KCG38_RS27555 (KCG38_27555) | 5874796..5876175 | + | 1380 | WP_023093860.1 | hypothetical protein | VF |
| KCG38_RS27560 (KCG38_27560) | 5876193..5876630 | + | 438 | WP_023093861.1 | hypothetical protein | VF |
| KCG38_RS27565 (KCG38_27565) | 5877629..5878615 | + | 987 | WP_211851998.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| KCG38_RS27570 (KCG38_27570) | 5878925..5879491 | + | 567 | WP_003099777.1 | hypothetical protein | - |
| KCG38_RS27575 (KCG38_27575) | 5879568..5879708 | + | 141 | WP_003099780.1 | hypothetical protein | - |
| KCG38_RS36385 | 5879746..5879880 | + | 135 | WP_003099783.1 | hypothetical protein | - |
| KCG38_RS27580 (KCG38_27580) | 5880206..5880694 | + | 489 | WP_003099785.1 | STY4534 family ICE replication protein | - |
| KCG38_RS27585 (KCG38_27585) | 5880832..5880990 | + | 159 | WP_003099787.1 | hypothetical protein | - |
| KCG38_RS27590 (KCG38_27590) | 5881064..5881261 | + | 198 | WP_003099789.1 | hypothetical protein | - |
| KCG38_RS27595 (KCG38_27595) | 5881381..5881749 | + | 369 | WP_003099790.1 | hypothetical protein | - |
| KCG38_RS27600 (KCG38_27600) | 5881992..5882342 | + | 351 | WP_003099791.1 | hypothetical protein | - |
| KCG38_RS27605 (KCG38_27605) | 5882399..5883031 | + | 633 | WP_003099792.1 | DUF3275 family protein | - |
| KCG38_RS27610 (KCG38_27610) | 5883028..5883303 | + | 276 | WP_003099794.1 | hypothetical protein | - |
| KCG38_RS27615 (KCG38_27615) | 5883373..5883735 | + | 363 | WP_003099795.1 | hypothetical protein | - |
| KCG38_RS27620 (KCG38_27620) | 5883803..5884063 | + | 261 | WP_003099797.1 | hypothetical protein | - |
| KCG38_RS27625 (KCG38_27625) | 5884156..5884761 | + | 606 | WP_003099799.1 | hypothetical protein | - |
| KCG38_RS27630 (KCG38_27630) | 5884791..5886236 | + | 1446 | WP_003099801.1 | DUF6094 domain-containing protein | - |
| KCG38_RS27635 (KCG38_27635) | 5886341..5888590 | + | 2250 | WP_042166055.1 | DEAD/DEAH box helicase | - |
| KCG38_RS27640 (KCG38_27640) | 5888685..5889141 | + | 457 | Protein_5492 | IS3 family transposase | - |
| KCG38_RS27645 (KCG38_27645) | 5889320..5890531 | + | 1212 | WP_223697283.1 | three-Cys-motif partner protein TcmP | - |
| KCG38_RS27650 (KCG38_27650) | 5890764..5891507 | + | 744 | WP_003117069.1 | phage Gp37/Gp68 family protein | - |
| KCG38_RS27655 (KCG38_27655) | 5891525..5892859 | + | 1335 | WP_003117070.1 | three-Cys-motif partner protein TcmP | - |
| KCG38_RS27660 (KCG38_27660) | 5893311..5894009 | + | 699 | WP_023121525.1 | hypothetical protein | - |
| KCG38_RS27665 (KCG38_27665) | 5894020..5894775 | + | 756 | WP_003099814.1 | TIGR03759 family integrating conjugative element protein | - |
| KCG38_RS27670 (KCG38_27670) | 5894760..5895341 | + | 582 | WP_003117072.1 | hypothetical protein | VF |
| KCG38_RS27675 (KCG38_27675) | 5895338..5895838 | + | 501 | WP_003099819.1 | integrating conjugative element protein | - |
| KCG38_RS27680 (KCG38_27680) | 5895847..5896116 | + | 270 | WP_003099820.1 | hypothetical protein | - |
| KCG38_RS27685 (KCG38_27685) | 5896120..5898351 | + | 2232 | WP_196994078.1 | type IV conjugative transfer system coupling protein TraD | - |
| KCG38_RS27690 (KCG38_27690) | 5898351..5899097 | + | 747 | WP_003086173.1 | TIGR03747 family integrating conjugative element membrane protein | - |
| KCG38_RS27695 (KCG38_27695) | 5899115..5899606 | + | 492 | WP_003109389.1 | hypothetical protein | - |
| KCG38_RS27700 (KCG38_27700) | 5899846..5901327 | + | 1482 | WP_042166176.1 | UvrD-helicase domain-containing protein | - |
| KCG38_RS27705 (KCG38_27705) | 5901436..5901741 | + | 306 | WP_058016274.1 | hypothetical protein | - |
| KCG38_RS27710 (KCG38_27710) | 5901835..5902173 | + | 339 | WP_003158157.1 | RAQPRD family integrative conjugative element protein | - |
| KCG38_RS27715 (KCG38_27715) | 5902170..5902409 | + | 240 | WP_003121019.1 | TIGR03758 family integrating conjugative element protein | - |
| KCG38_RS27720 (KCG38_27720) | 5902427..5902783 | + | 357 | WP_003117077.1 | TIGR03745 family integrating conjugative element membrane protein | - |
| KCG38_RS27725 (KCG38_27725) | 5902794..5903180 | + | 387 | WP_003456553.1 | TIGR03750 family conjugal transfer protein | - |
| KCG38_RS27730 (KCG38_27730) | 5903177..5903836 | + | 660 | WP_003117079.1 | TIGR03746 family integrating conjugative element protein | - |
| KCG38_RS27735 (KCG38_27735) | 5903833..5904717 | + | 885 | WP_003121020.1 | TIGR03749 family integrating conjugative element protein | - |
| KCG38_RS27740 (KCG38_27740) | 5904701..5906206 | + | 1506 | WP_003121021.1 | TIGR03752 family integrating conjugative element protein | - |
| KCG38_RS27745 (KCG38_27745) | 5906184..5906627 | + | 444 | WP_003121022.1 | TIGR03751 family conjugal transfer lipoprotein | - |
| KCG38_RS27750 (KCG38_27750) | 5906627..5909569 | + | 2943 | WP_179063012.1 | conjugative transfer ATPase | - |
| KCG38_RS27755 (KCG38_27755) | 5909566..5909850 | + | 285 | WP_003086159.1 | hypothetical protein | - |
| KCG38_RS27760 (KCG38_27760) | 5909847..5910518 | + | 672 | WP_023092929.1 | DsbA family protein | - |
| KCG38_RS27765 (KCG38_27765) | 5910674..5911927 | + | 1254 | WP_003151440.1 | DNA cytosine methyltransferase | - |
| KCG38_RS27770 (KCG38_27770) | 5911914..5914016 | - | 2103 | WP_023092930.1 | ATP-binding protein | - |
| KCG38_RS27775 (KCG38_27775) | 5914282..5914713 | + | 432 | WP_023518409.1 | TIGR03757 family integrating conjugative element protein | - |
| KCG38_RS27780 (KCG38_27780) | 5914713..5915651 | + | 939 | WP_012076879.1 | TIGR03756 family integrating conjugative element protein | - |
| KCG38_RS27785 (KCG38_27785) | 5915669..5917051 | + | 1383 | WP_050413521.1 | integrating conjugative element protein | - |
| KCG38_RS27790 (KCG38_27790) | 5917051..5917398 | + | 348 | WP_003099870.1 | hypothetical protein | - |
| KCG38_RS27795 (KCG38_27795) | 5917395..5918906 | + | 1512 | WP_211852000.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| KCG38_RS27800 (KCG38_27800) | 5918944..5919297 | - | 354 | WP_165567195.1 | hypothetical protein | - |
| KCG38_RS27805 (KCG38_27805) | 5919413..5919685 | + | 273 | WP_003086148.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| KCG38_RS27810 (KCG38_27810) | 5919689..5920039 | + | 351 | WP_003117088.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KCG38_RS27815 (KCG38_27815) | 5920212..5920442 | + | 231 | WP_021264354.1 | hypothetical protein | - |
| KCG38_RS27820 (KCG38_27820) | 5920663..5922012 | + | 1350 | WP_023082061.1 | SH3 domain-containing protein | - |
| KCG38_RS27825 (KCG38_27825) | 5922510..5924429 | + | 1920 | WP_211852002.1 | MobH family relaxase | - |
| KCG38_RS27830 (KCG38_27830) | 5924426..5925706 | + | 1281 | WP_211852004.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KCG38_RS27850 (KCG38_27850) | 5926558..5929122 | - | 2565 | WP_003145976.1 | ATP-dependent chaperone ClpB | - |
| KCG38_RS27855 (KCG38_27855) | 5929278..5930006 | - | 729 | WP_003116257.1 | peptidoglycan editing factor PgeF | - |
| KCG38_RS27860 (KCG38_27860) | 5930003..5930965 | - | 963 | WP_003094686.1 | 23S rRNA pseudouridine(1911/1915/1917) synthase RluD | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|