MGE detailed information
MGE type: Prophage MGE length: 48700 bp
Accession: NZ_CP072933 Location: 433775..482474 Organism: Xylella fastidiosa subsp. multiplex strain AlmaEM3 Replicon: chromosome
Accession: NZ_CP072933 Location: 433775..482474 Organism: Xylella fastidiosa subsp. multiplex strain AlmaEM3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KBP49_RS01715 (KBP49_01715) | 429237..429896 | - | 660 | WP_004085204.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| KBP49_RS01720 (KBP49_01720) | 429993..431909 | - | 1917 | WP_004085203.1 | phosphogluconate dehydratase | - |
| KBP49_RS01725 (KBP49_01725) | 432049..432768 | - | 720 | WP_004085202.1 | 6-phosphogluconolactonase | - |
| KBP49_RS01730 (KBP49_01730) | 432765..433778 | - | 1014 | WP_004085201.1 | glucokinase | - |
| KBP49_RS01735 (KBP49_01735) | 433775..435277 | - | 1503 | WP_004085200.1 | glucose-6-phosphate dehydrogenase | - |
| KBP49_RS01740 (KBP49_01740) | 435537..436631 | + | 1095 | WP_012337631.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| KBP49_RS01745 (KBP49_01745) | 436776..437636 | - | 861 | WP_021358464.1 | folate-binding protein YgfZ | - |
| KBP49_RS01750 (KBP49_01750) | 437932..438096 | + | 165 | WP_071869476.1 | DUF1674 domain-containing protein | - |
| KBP49_RS01755 (KBP49_01755) | 438154..438576 | + | 423 | WP_021358463.1 | succinate dehydrogenase, cytochrome b556 subunit | - |
| KBP49_RS01760 (KBP49_01760) | 438573..438956 | + | 384 | WP_004085197.1 | succinate dehydrogenase, hydrophobic membrane anchor protein | - |
| KBP49_RS01765 (KBP49_01765) | 438964..440754 | + | 1791 | WP_071869468.1 | succinate dehydrogenase flavoprotein subunit | - |
| KBP49_RS01770 (KBP49_01770) | 440775..441560 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| KBP49_RS01775 (KBP49_01775) | 441681..441929 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| KBP49_RS01780 (KBP49_01780) | 441961..442332 | + | 372 | WP_247644820.1 | hypothetical protein | - |
| KBP49_RS01785 (KBP49_01785) | 442358..443599 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| KBP49_RS01790 (KBP49_01790) | 443592..444314 | + | 723 | WP_038230153.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| KBP49_RS01795 (KBP49_01795) | 444662..447139 | + | 2478 | WP_071869475.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| KBP49_RS01800 (KBP49_01800) | 447124..447786 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| KBP49_RS01805 (KBP49_01805) | 447791..448228 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| KBP49_RS01810 (KBP49_01810) | 448246..449994 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| KBP49_RS01815 (KBP49_01815) | 449991..451010 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| KBP49_RS01820 (KBP49_01820) | 451385..452467 | - | 1083 | WP_071869467.1 | phage late control D family protein | - |
| KBP49_RS01825 (KBP49_01825) | 452458..452676 | - | 219 | WP_038230466.1 | tail protein X | - |
| KBP49_RS01830 (KBP49_01830) | 452673..453155 | - | 483 | WP_071869466.1 | phage tail protein | - |
| KBP49_RS01835 (KBP49_01835) | 453152..455407 | - | 2256 | WP_242412813.1 | phage tail tape measure protein | - |
| KBP49_RS01840 (KBP49_01840) | 455498..455785 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| KBP49_RS01845 (KBP49_01845) | 455788..456297 | - | 510 | WP_012337639.1 | phage major tail tube protein | - |
| KBP49_RS01850 (KBP49_01850) | 456297..457475 | - | 1179 | WP_027700434.1 | phage tail sheath family protein | - |
| KBP49_RS01855 (KBP49_01855) | 457540..459132 | - | 1593 | WP_140161039.1 | tail fiber domain-containing protein | - |
| KBP49_RS01860 (KBP49_01860) | 459140..459697 | - | 558 | WP_004086970.1 | phage tail protein I | - |
| KBP49_RS01865 (KBP49_01865) | 459690..460583 | - | 894 | WP_011097611.1 | baseplate J/gp47 family protein | - |
| KBP49_RS01870 (KBP49_01870) | 460583..460906 | - | 324 | WP_011097934.1 | GPW/gp25 family protein | - |
| KBP49_RS01875 (KBP49_01875) | 461055..461369 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KBP49_RS01880 (KBP49_01880) | 461371..461652 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| KBP49_RS01885 (KBP49_01885) | 461664..461963 | + | 300 | WP_020850959.1 | HigA family addiction module antitoxin | - |
| KBP49_RS01890 (KBP49_01890) | 461968..462555 | - | 588 | WP_071869462.1 | phage baseplate assembly protein V | - |
| KBP49_RS01895 (KBP49_01895) | 462552..463094 | - | 543 | WP_140161038.1 | hypothetical protein | - |
| KBP49_RS01900 (KBP49_01900) | 463070..463591 | - | 522 | WP_011097614.1 | hypothetical protein | - |
| KBP49_RS01905 (KBP49_01905) | 463588..463911 | - | 324 | WP_011097935.1 | hypothetical protein | - |
| KBP49_RS01910 (KBP49_01910) | 463911..464171 | - | 261 | WP_038232801.1 | hypothetical protein | - |
| KBP49_RS01915 (KBP49_01915) | 464189..466063 | - | 1875 | WP_038232803.1 | phage major capsid protein | - |
| KBP49_RS01920 (KBP49_01920) | 466060..467646 | - | 1587 | WP_012382621.1 | phage portal protein | - |
| KBP49_RS01925 (KBP49_01925) | 467643..468194 | - | 552 | WP_004088901.1 | hypothetical protein | - |
| KBP49_RS01930 (KBP49_01930) | 468198..470150 | - | 1953 | WP_004088899.1 | phage terminase large subunit family protein | - |
| KBP49_RS01935 (KBP49_01935) | 470143..470676 | - | 534 | WP_051247998.1 | terminase small subunit | - |
| KBP49_RS01940 (KBP49_01940) | 470849..471067 | - | 219 | WP_247644821.1 | hypothetical protein | - |
| KBP49_RS01945 (KBP49_01945) | 471075..471536 | - | 462 | WP_140160960.1 | hypothetical protein | - |
| KBP49_RS01950 (KBP49_01950) | 471526..471855 | - | 330 | WP_004085022.1 | phage holin family protein | - |
| KBP49_RS01955 (KBP49_01955) | 471848..472348 | - | 501 | WP_154195470.1 | lysozyme | - |
| KBP49_RS01960 (KBP49_01960) | 472443..473175 | - | 733 | Protein_372 | site-specific DNA-methyltransferase | - |
| KBP49_RS01965 (KBP49_01965) | 473365..473700 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KBP49_RS01970 (KBP49_01970) | 473697..473951 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KBP49_RS01975 (KBP49_01975) | 474031..474726 | - | 696 | WP_140162110.1 | hypothetical protein | - |
| KBP49_RS01980 (KBP49_01980) | 475202..476470 | + | 1269 | WP_247644822.1 | DNA polymerase | - |
| KBP49_RS01985 (KBP49_01985) | 476467..476745 | + | 279 | WP_071869551.1 | VRR-NUC domain-containing protein | - |
| KBP49_RS01990 (KBP49_01990) | 476747..477052 | - | 306 | WP_024749221.1 | hypothetical protein | - |
| KBP49_RS01995 (KBP49_01995) | 477138..478556 | + | 1419 | WP_071869550.1 | DEAD/DEAH box helicase | - |
| KBP49_RS02000 (KBP49_02000) | 478553..478717 | + | 165 | WP_162848953.1 | hypothetical protein | - |
| KBP49_RS02005 (KBP49_02005) | 478710..478967 | + | 258 | WP_071869549.1 | DUF4224 domain-containing protein | - |
| KBP49_RS02010 (KBP49_02010) | 478957..479976 | + | 1020 | WP_140160986.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KBP49_RS02015 (KBP49_02015) | 480752..481393 | + | 642 | WP_027700077.1 | Chromosome-partitioning ATPase Soj | VF |
| KBP49_RS02020 (KBP49_02020) | 481421..481897 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| KBP49_RS02025 (KBP49_02025) | 481902..482474 | + | 573 | WP_004085682.1 | YceI family protein | - |
| KBP49_RS02030 (KBP49_02030) | 482471..484429 | + | 1959 | WP_038210463.1 | phospholipase D family protein | - |
| KBP49_RS02035 (KBP49_02035) | 485409..485801 | - | 393 | WP_071869548.1 | helix-turn-helix transcriptional regulator | - |
| KBP49_RS10880 | 486071..486257 | + | 187 | Protein_388 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|