MGE detailed information
MGE type: Prophage MGE length: 38996 bp
Accession: NZ_CP072932 Location: 445698..484693 Organism: Xylella fastidiosa subsp. multiplex strain BB08-1 Replicon: chromosome
Accession: NZ_CP072932 Location: 445698..484693 Organism: Xylella fastidiosa subsp. multiplex strain BB08-1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| KBP48_RS01785 (KBP48_01785) | 441070..442860 | + | 1791 | WP_140189719.1 | succinate dehydrogenase flavoprotein subunit | - |
| KBP48_RS01790 (KBP48_01790) | 442881..443666 | + | 786 | WP_004085195.1 | succinate dehydrogenase iron-sulfur subunit | - |
| KBP48_RS01795 (KBP48_01795) | 443787..444035 | + | 249 | WP_004085194.1 | succinate dehydrogenase assembly factor 2 | - |
| KBP48_RS01800 (KBP48_01800) | 443986..444438 | + | 453 | WP_004089278.1 | hypothetical protein | - |
| KBP48_RS01805 (KBP48_01805) | 444464..445705 | + | 1242 | WP_004085192.1 | lipoprotein-releasing ABC transporter permease subunit | - |
| KBP48_RS01810 (KBP48_01810) | 445698..446420 | + | 723 | WP_161978297.1 | Lipoprotein-releasing system ATP-binding protein LolD | VF |
| KBP48_RS01815 (KBP48_01815) | 446768..449245 | + | 2478 | WP_071869475.1 | DNA internalization-related competence protein ComEC/Rec2 | - |
| KBP48_RS01820 (KBP48_01820) | 449230..449892 | + | 663 | WP_004085189.1 | MotA/TolQ/ExbB proton channel family protein | - |
| KBP48_RS01825 (KBP48_01825) | 449897..450334 | + | 438 | WP_004089267.1 | biopolymer transporter ExbD | - |
| KBP48_RS01830 (KBP48_01830) | 450352..452100 | + | 1749 | WP_004085187.1 | Lipid A export ATP-binding/permease protein MsbA | VF |
| KBP48_RS01835 (KBP48_01835) | 452097..453116 | + | 1020 | WP_004085186.1 | Tetraacyldisaccharide 4'-kinase | VF |
| KBP48_RS01840 (KBP48_01840) | 453491..454573 | - | 1083 | WP_140189720.1 | phage late control D family protein | - |
| KBP48_RS01845 (KBP48_01845) | 454564..454782 | - | 219 | WP_040123123.1 | tail protein X | - |
| KBP48_RS01850 (KBP48_01850) | 454779..455261 | - | 483 | WP_027700431.1 | phage tail protein | - |
| KBP48_RS01855 (KBP48_01855) | 455258..457513 | - | 2256 | WP_247644609.1 | phage tail tape measure protein | - |
| KBP48_RS01860 (KBP48_01860) | 457604..457891 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| KBP48_RS01865 (KBP48_01865) | 457894..458403 | - | 510 | WP_027700433.1 | phage major tail tube protein | - |
| KBP48_RS01870 (KBP48_01870) | 458403..459581 | - | 1179 | WP_027700434.1 | phage tail sheath family protein | - |
| KBP48_RS01875 (KBP48_01875) | 459646..461238 | - | 1593 | WP_140189722.1 | tail fiber domain-containing protein | - |
| KBP48_RS01880 (KBP48_01880) | 461246..461803 | - | 558 | WP_040123338.1 | phage tail protein I | - |
| KBP48_RS01885 (KBP48_01885) | 461796..462689 | - | 894 | WP_140189723.1 | baseplate J/gp47 family protein | - |
| KBP48_RS01890 (KBP48_01890) | 462689..463012 | - | 324 | WP_228304176.1 | GPW/gp25 family protein | - |
| KBP48_RS01895 (KBP48_01895) | 463161..463475 | + | 315 | WP_004087029.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| KBP48_RS01900 (KBP48_01900) | 463477..463758 | + | 282 | WP_038230627.1 | XRE family transcriptional regulator | - |
| KBP48_RS01905 (KBP48_01905) | 463770..464069 | + | 300 | WP_080566203.1 | HigA family addiction module antitoxin | - |
| KBP48_RS01910 (KBP48_01910) | 464074..464661 | - | 588 | WP_140189724.1 | phage baseplate assembly protein V | - |
| KBP48_RS01915 (KBP48_01915) | 464658..465200 | - | 543 | WP_038210495.1 | hypothetical protein | - |
| KBP48_RS01920 (KBP48_01920) | 465176..465697 | - | 522 | WP_140189725.1 | hypothetical protein | - |
| KBP48_RS01925 (KBP48_01925) | 465694..466017 | - | 324 | WP_012382618.1 | hypothetical protein | - |
| KBP48_RS01930 (KBP48_01930) | 466017..466277 | - | 261 | WP_140162032.1 | hypothetical protein | - |
| KBP48_RS01935 (KBP48_01935) | 466295..468169 | - | 1875 | WP_038230171.1 | phage major capsid protein | - |
| KBP48_RS01940 (KBP48_01940) | 468166..469752 | - | 1587 | WP_210876751.1 | phage portal protein | - |
| KBP48_RS01945 (KBP48_01945) | 469749..470297 | - | 549 | WP_128283776.1 | hypothetical protein | - |
| KBP48_RS01950 (KBP48_01950) | 470301..472253 | - | 1953 | WP_038230181.1 | phage terminase large subunit family protein | - |
| KBP48_RS01955 (KBP48_01955) | 472246..472779 | - | 534 | WP_128283774.1 | terminase small subunit | - |
| KBP48_RS01960 (KBP48_01960) | 472952..473176 | - | 225 | WP_140189726.1 | hypothetical protein | - |
| KBP48_RS01965 (KBP48_01965) | 473178..473639 | - | 462 | WP_140189727.1 | hypothetical protein | - |
| KBP48_RS01970 (KBP48_01970) | 473629..473958 | - | 330 | WP_173391721.1 | phage holin family protein | - |
| KBP48_RS01975 (KBP48_01975) | 473951..474451 | - | 501 | WP_140189728.1 | lysozyme | - |
| KBP48_RS01980 (KBP48_01980) | 474551..475282 | - | 732 | WP_140189729.1 | site-specific DNA-methyltransferase | - |
| KBP48_RS01985 (KBP48_01985) | 475472..475807 | - | 336 | WP_004085025.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| KBP48_RS01990 (KBP48_01990) | 475804..476058 | - | 255 | WP_004089517.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| KBP48_RS01995 (KBP48_01995) | 476138..476833 | - | 696 | Protein_378 | hypothetical protein | - |
| KBP48_RS02000 (KBP48_02000) | 477309..478577 | + | 1269 | WP_247644610.1 | DNA polymerase | - |
| KBP48_RS02005 (KBP48_02005) | 478574..478852 | + | 279 | WP_004086077.1 | VRR-NUC domain-containing protein | - |
| KBP48_RS02010 (KBP48_02010) | 478854..479270 | - | 417 | WP_140189730.1 | DUF1640 domain-containing protein | - |
| KBP48_RS02015 (KBP48_02015) | 479355..480773 | + | 1419 | WP_140189733.1 | DEAD/DEAH box helicase | - |
| KBP48_RS02020 (KBP48_02020) | 480770..480934 | + | 165 | WP_200873170.1 | hypothetical protein | - |
| KBP48_RS02025 (KBP48_02025) | 480927..481175 | + | 249 | WP_140189628.1 | DUF4224 domain-containing protein | - |
| KBP48_RS02030 (KBP48_02030) | 481175..482194 | + | 1020 | WP_140189734.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| KBP48_RS02035 (KBP48_02035) | 482971..483612 | + | 642 | WP_027700077.1 | Chromosome-partitioning ATPase Soj | VF |
| KBP48_RS02040 (KBP48_02040) | 483640..484116 | + | 477 | WP_004085683.1 | histidine phosphatase family protein | - |
| KBP48_RS02045 (KBP48_02045) | 484121..484693 | + | 573 | WP_004085682.1 | YceI family protein | - |
| KBP48_RS02050 (KBP48_02050) | 484690..486648 | + | 1959 | WP_038210463.1 | phospholipase D family protein | - |
| KBP48_RS02055 (KBP48_02055) | 487631..488023 | - | 393 | WP_071869548.1 | helix-turn-helix transcriptional regulator | - |
| KBP48_RS02060 (KBP48_02060) | 488357..488686 | + | 330 | WP_247644611.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|