MGE detailed information
MGE type: Prophage MGE length: 19188 bp
Accession: NZ_CP072913 Location: 1562095..1581282 Organism: Pseudomonas sp. Tri1 Replicon: chromosome
Accession: NZ_CP072913 Location: 1562095..1581282 Organism: Pseudomonas sp. Tri1 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J9870_RS06930 | 1558232..1559380 | + | 1149 | WP_210643254.1 | L-threonine dehydrogenase | - |
| J9870_RS06935 | 1559377..1560540 | - | 1164 | WP_210643255.1 | MFS transporter | - |
| J9870_RS06940 | 1560554..1561789 | - | 1236 | WP_210643256.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| J9870_RS06945 | 1562095..1562511 | + | 417 | WP_210643257.1 | VOC family protein | - |
| J9870_RS06950 | 1562682..1564031 | + | 1350 | WP_210643258.1 | putative signaling protein | VF |
| J9870_RS06955 | 1564309..1564812 | + | 504 | WP_210643259.1 | DUF4142 domain-containing protein | - |
| J9870_RS06960 | 1564889..1565797 | + | 909 | WP_210643260.1 | putative oxidoreductase YghA | VF |
| J9870_RS06965 | 1565846..1566250 | - | 405 | WP_210643261.1 | low affinity iron permease family protein | - |
| J9870_RS06970 | 1566425..1566571 | + | 147 | WP_210643262.1 | hypothetical protein | - |
| J9870_RS06975 | 1566692..1567102 | - | 411 | WP_210643263.1 | type II toxin-antitoxin system HicB family antitoxin | Antitoxin Detail |
| J9870_RS06980 | 1567104..1567319 | - | 216 | WP_210643264.1 | type II toxin-antitoxin system HicA family toxin | Toxin Detail |
| J9870_RS06985 | 1567602..1568231 | - | 630 | WP_210643265.1 | LysE family translocator | - |
| J9870_RS06990 | 1568375..1568857 | + | 483 | WP_134923166.1 | Lrp/AsnC family transcriptional regulator | - |
| J9870_RS06995 | 1568974..1569273 | - | 300 | WP_210643266.1 | DUF3077 domain-containing protein | - |
| J9870_RS07000 | 1570506..1571363 | + | 858 | WP_210643267.1 | hypothetical protein | - |
| J9870_RS07005 | 1571562..1573076 | + | 1515 | WP_246883082.1 | AAA family ATPase | - |
| J9870_RS07010 | 1573073..1573915 | + | 843 | WP_210643268.1 | hypothetical protein | - |
| J9870_RS07015 | 1574247..1575635 | - | 1389 | WP_210643269.1 | UvrD-helicase domain-containing protein | - |
| J9870_RS07020 | 1575622..1577340 | - | 1719 | WP_210643270.1 | AAA family ATPase | - |
| J9870_RS07025 | 1577886..1578707 | - | 822 | WP_210643271.1 | hypothetical protein | - |
| J9870_RS07030 | 1579183..1580280 | - | 1098 | WP_210643272.1 | ImmA/IrrE family metallo-endopeptidase | - |
| J9870_RS07035 | 1580270..1580890 | - | 621 | WP_210643273.1 | hypothetical protein | - |
| J9870_RS07040 | 1581004..1581282 | - | 279 | WP_246883083.1 | hypothetical protein | - |
| J9870_RS07050 | 1581907..1582791 | - | 885 | WP_210643274.1 | alpha/beta hydrolase | - |
| J9870_RS07055 | 1583100..1583792 | - | 693 | WP_210643275.1 | pseudouridine synthase | - |
| J9870_RS07060 | 1583828..1584046 | - | 219 | WP_210643276.1 | cysteine-rich CWC family protein | - |
| J9870_RS07065 | 1584039..1584656 | - | 618 | Protein_1393 | GGDEF domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|