MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 74714 bp
Accession: NZ_CP072800 Location: 1620348..1695061 Organism: Candidatus Thiothrix anitrata isolate A52 Replicon: chromosome
Accession: NZ_CP072800 Location: 1620348..1695061 Organism: Candidatus Thiothrix anitrata isolate A52 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8380_RS08350 (J8380_08350) | 1616806..1616988 | + | 183 | WP_210218195.1 | hypothetical protein | - |
| J8380_RS08355 (J8380_08355) | 1616985..1617893 | + | 909 | WP_228292413.1 | glycosyltransferase | - |
| J8380_RS08360 (J8380_08360) | 1617919..1618986 | + | 1068 | WP_210230045.1 | glycosyltransferase family 2 protein | - |
| J8380_RS08365 (J8380_08365) | 1619307..1619735 | + | 429 | WP_210218192.1 | 50S ribosomal protein L13 | - |
| J8380_RS08370 (J8380_08370) | 1619750..1620142 | + | 393 | WP_210230047.1 | 30S ribosomal protein S9 | - |
| J8380_RS08375 (J8380_08375) | 1620439..1621221 | + | 783 | WP_210230049.1 | ParA family protein | - |
| J8380_RS08380 (J8380_08380) | 1621212..1621463 | + | 252 | WP_210230051.1 | hypothetical protein | - |
| J8380_RS08385 (J8380_08385) | 1621463..1621924 | + | 462 | WP_210230053.1 | hypothetical protein | - |
| J8380_RS08390 (J8380_08390) | 1621921..1622253 | + | 333 | WP_210230055.1 | hypothetical protein | - |
| J8380_RS08395 (J8380_08395) | 1622250..1622585 | + | 336 | WP_210230057.1 | hypothetical protein | - |
| J8380_RS08400 (J8380_08400) | 1622582..1624327 | + | 1746 | WP_210230060.1 | ParB N-terminal domain-containing protein | - |
| J8380_RS08405 (J8380_08405) | 1624314..1624874 | + | 561 | WP_210230062.1 | STY4526/YPO1902 family pathogenicity island replication protein | - |
| J8380_RS08410 (J8380_08410) | 1624874..1626247 | + | 1374 | WP_210230064.1 | STY4528 family pathogenicity island replication protein | - |
| J8380_RS08415 (J8380_08415) | 1626851..1627723 | + | 873 | WP_210230066.1 | TIGR03761 family integrating conjugative element protein | - |
| J8380_RS08420 (J8380_08420) | 1627861..1628310 | + | 450 | WP_210230068.1 | hypothetical protein | - |
| J8380_RS08425 (J8380_08425) | 1628359..1628736 | + | 378 | WP_210230070.1 | single-stranded DNA-binding protein | - |
| J8380_RS08430 (J8380_08430) | 1628743..1628883 | + | 141 | WP_210230072.1 | hypothetical protein | - |
| J8380_RS08435 (J8380_08435) | 1629070..1629246 | + | 177 | WP_210230074.1 | hypothetical protein | - |
| J8380_RS08440 (J8380_08440) | 1629291..1631390 | + | 2100 | WP_228292414.1 | DNA topoisomerase III | - |
| J8380_RS08445 (J8380_08445) | 1631390..1631581 | + | 192 | WP_210230076.1 | hypothetical protein | - |
| J8380_RS08450 (J8380_08450) | 1631634..1632512 | + | 879 | WP_210230077.1 | hypothetical protein | - |
| J8380_RS08455 (J8380_08455) | 1632899..1633312 | + | 414 | WP_210230085.1 | STY4534 family ICE replication protein | - |
| J8380_RS08460 (J8380_08460) | 1633975..1636269 | + | 2295 | WP_210230087.1 | DEAD/DEAH box helicase | - |
| J8380_RS08465 (J8380_08465) | 1636502..1637197 | + | 696 | WP_210230089.1 | type-F conjugative transfer system protein TraW | - |
| J8380_RS08470 (J8380_08470) | 1637194..1638246 | + | 1053 | WP_210230091.1 | conjugal transfer pilus assembly protein TraU | - |
| J8380_RS08475 (J8380_08475) | 1638248..1638994 | + | 747 | WP_210230093.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| J8380_RS08480 (J8380_08480) | 1638991..1640331 | + | 1341 | WP_210230095.1 | hypothetical protein | - |
| J8380_RS08485 (J8380_08485) | 1640331..1641929 | + | 1599 | WP_210230097.1 | conjugal transfer protein TraN | - |
| J8380_RS08490 (J8380_08490) | 1641929..1642474 | + | 546 | WP_210230099.1 | hypothetical protein | - |
| J8380_RS08495 (J8380_08495) | 1642471..1643031 | + | 561 | WP_210230102.1 | DsbA family protein | - |
| J8380_RS08500 (J8380_08500) | 1643028..1643693 | + | 666 | WP_210230103.1 | hypothetical protein | VF |
| J8380_RS08505 (J8380_08505) | 1643713..1644093 | + | 381 | WP_210230109.1 | hypothetical protein | - |
| J8380_RS08510 (J8380_08510) | 1644152..1644583 | + | 432 | WP_210230112.1 | TraA family conjugative transfer protein | - |
| J8380_RS08515 (J8380_08515) | 1644605..1645036 | + | 432 | WP_210230115.1 | TraA family conjugative transfer protein | - |
| J8380_RS08520 (J8380_08520) | 1645116..1645418 | + | 303 | WP_210230117.1 | type IV conjugative transfer system protein TraL | - |
| J8380_RS08525 (J8380_08525) | 1645415..1646032 | + | 618 | WP_210230124.1 | TraE/TraK family type IV conjugative transfer system protein | - |
| J8380_RS08530 (J8380_08530) | 1646029..1646835 | + | 807 | WP_210230125.1 | type-F conjugative transfer system secretin TraK | - |
| J8380_RS08535 (J8380_08535) | 1646832..1648280 | + | 1449 | WP_210230127.1 | TrbI/VirB10 family protein | - |
| J8380_RS08540 (J8380_08540) | 1648274..1648633 | + | 360 | WP_210230129.1 | disulfide isomerase DsbC N-terminal domain-containing protein | - |
| J8380_RS08545 (J8380_08545) | 1648630..1649166 | + | 537 | WP_210230131.1 | TraV family lipoprotein | - |
| J8380_RS08550 (J8380_08550) | 1649166..1651700 | + | 2535 | WP_210230138.1 | type IV secretion system protein TraC | - |
| J8380_RS08555 (J8380_08555) | 1651690..1652310 | + | 621 | WP_210230140.1 | hypothetical protein | - |
| J8380_RS08560 (J8380_08560) | 1652288..1652824 | + | 537 | WP_210230142.1 | S26 family signal peptidase | - |
| J8380_RS08565 (J8380_08565) | 1652818..1653639 | + | 822 | WP_210230144.1 | conjugal transfer protein TraF | - |
| J8380_RS08570 (J8380_08570) | 1653639..1655078 | + | 1440 | WP_210230146.1 | conjugal transfer protein TraH | - |
| J8380_RS08575 (J8380_08575) | 1655091..1658552 | + | 3462 | WP_210230148.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| J8380_RS08580 (J8380_08580) | 1658819..1659136 | + | 318 | WP_210230150.1 | H-NS histone family protein | - |
| J8380_RS08585 (J8380_08585) | 1659649..1662168 | - | 2520 | WP_210230152.1 | cellulase family glycosylhydrolase | - |
| J8380_RS08590 (J8380_08590) | 1662333..1662962 | - | 630 | WP_210230154.1 | TetR/AcrR family transcriptional regulator | - |
| J8380_RS08595 (J8380_08595) | 1663149..1663358 | - | 210 | WP_210230156.1 | hypothetical protein | - |
| J8380_RS08600 (J8380_08600) | 1663368..1663934 | - | 567 | WP_210230158.1 | Tn3 family transposase TnpR_TnShfr1 | Transposase |
| J8380_RS08605 (J8380_08605) | 1663931..1664209 | - | 279 | WP_210230160.1 | hypothetical protein | - |
| J8380_RS08610 (J8380_08610) | 1665231..1665464 | - | 234 | WP_210225839.1 | WGR domain-containing protein | - |
| J8380_RS08615 (J8380_08615) | 1665611..1666051 | + | 441 | WP_210230163.1 | hypothetical protein | - |
| J8380_RS08620 (J8380_08620) | 1666055..1668028 | + | 1974 | WP_210230171.1 | MobH family relaxase | - |
| J8380_RS08625 (J8380_08625) | 1668074..1668448 | + | 375 | WP_210230174.1 | hypothetical protein | - |
| J8380_RS08630 (J8380_08630) | 1668445..1670481 | + | 2037 | WP_210230176.1 | type IV conjugative transfer system coupling protein TraD | - |
| J8380_RS08635 (J8380_08635) | 1670481..1671152 | + | 672 | WP_210230178.1 | DUF4400 domain-containing protein | - |
| J8380_RS08640 (J8380_08640) | 1671156..1672514 | + | 1359 | WP_210230180.1 | DUF853 family protein | - |
| J8380_RS08645 (J8380_08645) | 1672551..1672793 | + | 243 | WP_210230182.1 | hypothetical protein | - |
| J8380_RS08650 (J8380_08650) | 1672771..1673685 | + | 915 | WP_210230184.1 | hypothetical protein | - |
| J8380_RS08655 (J8380_08655) | 1673690..1673926 | + | 237 | WP_210230186.1 | hypothetical protein | - |
| J8380_RS08660 (J8380_08660) | 1674096..1674566 | + | 471 | WP_210230188.1 | hypothetical protein | - |
| J8380_RS08665 (J8380_08665) | 1674550..1675482 | - | 933 | WP_210230190.1 | hypothetical protein | - |
| J8380_RS08670 (J8380_08670) | 1675520..1675906 | - | 387 | WP_228292415.1 | GNAT family N-acetyltransferase | Toxin Detail |
| J8380_RS08675 (J8380_08675) | 1675996..1676280 | - | 285 | WP_210230192.1 | DUF1778 domain-containing protein | Antitoxin Detail |
| J8380_RS08680 (J8380_08680) | 1676404..1677849 | - | 1446 | WP_210230194.1 | DUF87 domain-containing protein | - |
| J8380_RS08685 (J8380_08685) | 1677854..1678924 | - | 1071 | WP_210230196.1 | hypothetical protein | - |
| J8380_RS08690 (J8380_08690) | 1678935..1680215 | - | 1281 | WP_210230198.1 | TIGR02594 family protein | - |
| J8380_RS08695 (J8380_08695) | 1680212..1680412 | - | 201 | WP_210230205.1 | hypothetical protein | - |
| J8380_RS08700 (J8380_08700) | 1680439..1680966 | - | 528 | WP_210225858.1 | hypothetical protein | - |
| J8380_RS08705 (J8380_08705) | 1680963..1681217 | - | 255 | WP_210225859.1 | hypothetical protein ; Integrase | Integrase |
| J8380_RS08710 (J8380_08710) | 1681214..1681381 | - | 168 | WP_210230207.1 | hypothetical protein | - |
| J8380_RS08715 (J8380_08715) | 1681398..1682612 | - | 1215 | WP_210230209.1 | hypothetical protein | - |
| J8380_RS08720 (J8380_08720) | 1682780..1683019 | - | 240 | WP_210230211.1 | hypothetical protein | - |
| J8380_RS08725 (J8380_08725) | 1683091..1683408 | + | 318 | WP_210230213.1 | helix-turn-helix transcriptional regulator | - |
| J8380_RS08730 (J8380_08730) | 1683405..1684433 | + | 1029 | WP_210230215.1 | Secretory immunoglobulin A-binding protein EsiB | VF |
| J8380_RS08735 (J8380_08735) | 1684577..1684852 | + | 276 | WP_210230218.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| J8380_RS08740 (J8380_08740) | 1684843..1685265 | + | 423 | WP_210230220.1 | type II toxin-antitoxin system VapC family toxin | - |
| J8380_RS08745 (J8380_08745) | 1685289..1686023 | - | 735 | WP_210230221.1 | cold shock domain-containing protein | - |
| J8380_RS08750 (J8380_08750) | 1686020..1686526 | - | 507 | WP_210230223.1 | GNAT family N-acetyltransferase | - |
| J8380_RS08755 (J8380_08755) | 1686523..1686789 | - | 267 | WP_210230225.1 | DUF1778 domain-containing protein | - |
| J8380_RS08765 (J8380_08765) | 1687339..1687614 | - | 276 | WP_210230227.1 | helix-turn-helix transcriptional regulator | - |
| J8380_RS08770 (J8380_08770) | 1687595..1687768 | - | 174 | WP_210230229.1 | hypothetical protein | - |
| J8380_RS08775 (J8380_08775) | 1687956..1688429 | - | 474 | WP_210230231.1 | type II toxin-antitoxin system VapC family toxin | - |
| J8380_RS08780 (J8380_08780) | 1688606..1688815 | + | 210 | WP_210230233.1 | hypothetical protein | - |
| J8380_RS08785 (J8380_08785) | 1688815..1689249 | + | 435 | WP_210230235.1 | hypothetical protein | - |
| J8380_RS08790 (J8380_08790) | 1689246..1689533 | + | 288 | WP_210230237.1 | hypothetical protein | - |
| J8380_RS18300 | 1689530..1689655 | + | 126 | WP_266097321.1 | hypothetical protein | - |
| J8380_RS08795 (J8380_08795) | 1689759..1690112 | + | 354 | WP_210230239.1 | hypothetical protein | - |
| J8380_RS08800 (J8380_08800) | 1690229..1690546 | + | 318 | WP_210230241.1 | hypothetical protein | - |
| J8380_RS08805 (J8380_08805) | 1690543..1690749 | + | 207 | WP_210230243.1 | hypothetical protein | - |
| J8380_RS08810 (J8380_08810) | 1690852..1692081 | + | 1230 | WP_210230245.1 | hypothetical protein | - |
| J8380_RS08815 (J8380_08815) | 1692078..1692641 | + | 564 | WP_210230247.1 | hypothetical protein | - |
| J8380_RS08820 (J8380_08820) | 1692746..1693267 | + | 522 | WP_210230249.1 | hypothetical protein | - |
| J8380_RS08825 (J8380_08825) | 1693302..1693775 | + | 474 | WP_210230251.1 | ProQ/FINO family protein | - |
| J8380_RS08830 (J8380_08830) | 1693881..1694786 | + | 906 | WP_210230253.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| J8380_RS08840 (J8380_08840) | 1695250..1697163 | + | 1914 | WP_228292416.1 | class I poly(R)-hydroxyalkanoic acid synthase | - |
| J8380_RS08845 (J8380_08845) | 1697184..1697936 | - | 753 | WP_210230255.1 | RNA methyltransferase | - |
| J8380_RS08850 (J8380_08850) | 1698034..1699551 | + | 1518 | WP_210230257.1 | alanine/glycine:cation symporter family protein | - |
| J8380_RS08855 (J8380_08855) | 1699594..1699977 | - | 384 | WP_210230259.1 | fluoride efflux transporter CrcB | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|