MGE detailed information
MGE type: Prophage MGE length: 47197 bp
Accession: NZ_CP072689 Location: 2338989..2386185 Organism: Escherichia marmotae strain YF8 Replicon: chromosome
Accession: NZ_CP072689 Location: 2338989..2386185 Organism: Escherichia marmotae strain YF8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8I93_RS10910 (2334305) | 2334305..2335132 | + | 828 | WP_000983718.1 | iron/manganese ABC transporter ATP-binding protein SitB | - |
| J8I93_RS10915 (2335129) | 2335129..2335986 | + | 858 | WP_001101728.1 | iron/manganese ABC transporter permease subunit SitC | - |
| J8I93_RS10920 (2335983) | 2335983..2336840 | + | 858 | WP_000968125.1 | iron/manganese ABC transporter permease subunit SitD | - |
| J8I93_RS10925 (2337313) | 2337313..2338107 | + | 795 | WP_000354607.1 | hypothetical protein | - |
| J8I93_RS10930 (2338197) | 2338197..2338383 | + | 187 | Protein_2133 | DinI-like family protein | - |
| J8I93_RS10935 (2338653) | 2338653..2338946 | - | 294 | WP_001405873.1 | hypothetical protein | - |
| J8I93_RS10940 (2338989) | 2338989..2340029 | - | 1041 | WP_001314683.1 | tail fiber domain-containing protein | - |
| J8I93_RS10945 (2340039) | 2340039..2340320 | - | 282 | WP_000654155.1 | hypothetical protein | - |
| J8I93_RS10950 (2340320) | 2340320..2342695 | - | 2376 | WP_024008692.1 | prophage tail fiber N-terminal domain-containing protein | - |
| J8I93_RS10955 (2342760) | 2342760..2343359 | - | 600 | WP_001542091.1 | Ail/Lom family outer membrane beta-barrel protein | - |
| J8I93_RS10960 (2343427) | 2343427..2346906 | - | 3480 | WP_016234318.1 | host specificity protein J | - |
| J8I93_RS10965 (2346967) | 2346967..2347569 | - | 603 | WP_000090943.1 | tail assembly protein | - |
| J8I93_RS10970 (2347506) | 2347506..2348249 | - | 744 | WP_001351716.1 | C40 family peptidase | - |
| J8I93_RS10975 (2348255) | 2348255..2348953 | - | 699 | WP_001152432.1 | phage minor tail protein L | - |
| J8I93_RS10980 (2348953) | 2348953..2349291 | - | 339 | WP_000024051.1 | phage tail protein | - |
| J8I93_RS10985 (2349284) | 2349284..2352517 | - | 3234 | WP_109536681.1 | phage tail tape measure protein | - |
| J8I93_RS10990 (2352681) | 2352681..2352881 | - | 201 | WP_032139919.1 | hypothetical protein | - |
| J8I93_RS10995 (2352989) | 2352989..2353348 | - | 360 | WP_122452218.1 | protein YdaY | - |
| J8I93_RS11000 (2353499) | 2353499..2354461 | - | 963 | WP_001328756.1 | phage tail tube protein | - |
| J8I93_RS11005 (2354488) | 2354488..2354880 | - | 393 | WP_000144678.1 | phage tail terminator-like protein | - |
| J8I93_RS11010 (2354877) | 2354877..2355257 | - | 381 | WP_001029815.1 | hypothetical protein | - |
| J8I93_RS11015 (2355258) | 2355258..2355641 | - | 384 | WP_000524260.1 | hypothetical protein | - |
| J8I93_RS11020 (2355641) | 2355641..2356036 | - | 396 | WP_000634214.1 | hypothetical protein | - |
| J8I93_RS11025 (2356040) | 2356040..2356216 | - | 177 | WP_000908084.1 | hypothetical protein | - |
| J8I93_RS11030 (2356259) | 2356259..2357398 | - | 1140 | WP_000918487.1 | P22 phage major capsid protein family protein | - |
| J8I93_RS11035 (2357497) | 2357497..2358261 | - | 765 | WP_000770042.1 | hypothetical protein | - |
| J8I93_RS11040 (2358366) | 2358366..2359478 | - | 1113 | WP_001363932.1 | phage minor head protein | - |
| J8I93_RS11045 (2359462) | 2359462..2360868 | - | 1407 | WP_061090517.1 | DUF4055 domain-containing protein | - |
| J8I93_RS11050 (2360871) | 2360871..2362172 | - | 1302 | WP_000625348.1 | terminase family protein | - |
| J8I93_RS11055 (2362153) | 2362153..2363247 | - | 1095 | WP_016242650.1 | terminase small subunit | - |
| J8I93_RS11060 (2363251) | 2363251..2363460 | - | 210 | WP_000126788.1 | hypothetical protein | - |
| J8I93_RS11065 (2363438) | 2363438..2364370 | - | 933 | WP_001204028.1 | hypothetical protein | - |
| J8I93_RS11070 (2364897) | 2364897..2365154 | - | 258 | Protein_2161 | ParB/Srx family N-terminal domain-containing protein | - |
| J8I93_RS11075 (2365292) | 2365292..2366749 | - | 1458 | WP_001097895.1 | Trk system potassium transporter TrkG | - |
| J8I93_RS11080 (2366946) | 2366946..2367131 | - | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| J8I93_RS11085 (2367348) | 2367348..2367824 | - | 477 | WP_001194112.1 | glycoside hydrolase family protein | - |
| J8I93_RS11090 (2367828) | 2367828..2368169 | - | 342 | WP_000781775.1 | phage holin, lambda family | - |
| J8I93_RS11095 (2368333) | 2368333..2368548 | + | 216 | WP_152948782.1 | hypothetical protein | - |
| J8I93_RS11100 (2368517) | 2368517..2369086 | - | 570 | WP_001208722.1 | hypothetical protein | - |
| J8I93_RS11105 (2369308) | 2369308..2369850 | - | 543 | WP_134267627.1 | DUF1133 family protein | - |
| J8I93_RS11110 (2369847) | 2369847..2370137 | - | 291 | WP_000228032.1 | DUF1364 domain-containing protein | - |
| J8I93_RS11115 (2370137) | 2370137..2370736 | - | 600 | WP_000940344.1 | DUF1367 family protein | - |
| J8I93_RS11120 (2371604) | 2371604..2371945 | + | 342 | WP_001445776.1 | DUF1971 domain-containing protein | - |
| J8I93_RS11125 (2372028) | 2372028..2372153 | - | 126 | WP_001445775.1 | Hok/Gef family protein | - |
| J8I93_RS11130 (2372676) | 2372676..2373449 | + | 774 | WP_000200358.1 | KilA-N domain-containing protein | - |
| J8I93_RS11135 (2373570) | 2373570..2374073 | - | 504 | WP_000137958.1 | hypothetical protein | - |
| J8I93_RS11140 (2374235) | 2374235..2374657 | - | 423 | WP_001141108.1 | DUF977 family protein | - |
| J8I93_RS11145 (2374673) | 2374673..2375434 | - | 762 | WP_000450662.1 | DUF1627 domain-containing protein | - |
| J8I93_RS11150 (2375457) | 2375457..2376203 | - | 747 | WP_000788970.1 | ATP-binding protein | - |
| J8I93_RS11155 (2376210) | 2376210..2377067 | - | 858 | WP_000899746.1 | YdaU family protein | - |
| J8I93_RS11160 (2377080) | 2377080..2377502 | - | 423 | WP_000693797.1 | toxin YdaT family protein | - |
| J8I93_RS11165 (2377525) | 2377525..2377821 | - | 297 | WP_000712069.1 | toxin YdaS | - |
| J8I93_RS11170 (2377945) | 2377945..2378421 | + | 477 | WP_000948459.1 | DNA-binding transcriptional repressor RacR | - |
| J8I93_RS11175 (2378730) | 2378730..2378864 | + | 135 | WP_001571370.1 | hypothetical protein | - |
| J8I93_RS11180 (2378875) | 2378875..2379030 | + | 156 | WP_001169151.1 | YdaF family protein | - |
| J8I93_RS11185 (2379027) | 2379027..2379515 | - | 489 | WP_089588915.1 | superinfection exclusion B family protein | - |
| J8I93_RS11190 (2379956) | 2379956..2380177 | + | 222 | WP_000560223.1 | killing protein KilR | - |
| J8I93_RS11195 (2380177) | 2380177..2380347 | + | 171 | WP_001485242.1 | YdaE family protein | - |
| J8I93_RS11200 (2380422) | 2380422..2380697 | + | 276 | WP_000632297.1 | protein RacC | - |
| J8I93_RS11205 (2380799) | 2380799..2383399 | + | 2601 | WP_024008686.1 | exodeoxyribonuclease VIII | - |
| J8I93_RS11210 (2383392) | 2383392..2384201 | + | 810 | WP_000166319.1 | recombination protein RecT | - |
| J8I93_RS11215 (2384258) | 2384258..2384452 | + | 195 | WP_042038331.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| - (2384451) | 2384451..2384629 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2384451) | 2384451..2384629 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2384451) | 2384451..2384629 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2384451) | 2384451..2384629 | - | 179 | NuclAT_0 | - | Antitoxin Detail |
| J8I93_RS11220 (2384445) | 2384445..2384633 | + | 189 | WP_001302840.1 | DUF1187 family protein | - |
| J8I93_RS11225 (2384733) | 2384733..2384948 | + | 216 | WP_000079604.1 | excisionase XisR | - |
| J8I93_RS11230 (2384950) | 2384950..2386185 | + | 1236 | WP_024008685.1 | site-specific integrase | - |
| J8I93_RS11235 (2386237) | 2386237..2387172 | + | 936 | WP_016242657.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| J8I93_RS11240 (2387267) | 2387267..2388640 | - | 1374 | WP_038354512.1 | ATP-dependent RNA helicase DbpA | - |
| J8I93_RS11245 (2388670) | 2388670..2388843 | - | 174 | WP_001296046.1 | protein YnaL | - |
| J8I93_RS11250 (2389118) | 2389118..2390101 | - | 984 | WP_000452014.1 | zinc transporter ZntB | - |
| J8I93_RS11255 (2390115) | 2390115..2390162 | - | 48 | WP_214678597.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|