MGE detailed information
MGE type: Prophage MGE length: 64471 bp
Accession: NZ_CP072688 Location: 2250155..2314625 Organism: Escherichia coli strain P4 Replicon: chromosome
Accession: NZ_CP072688 Location: 2250155..2314625 Organism: Escherichia coli strain P4 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8I92_RS10710 (2246298) | 2246298..2248109 | + | 1812 | WP_001069461.1 | phosphogluconate dehydratase | - |
| J8I92_RS10715 (2248146) | 2248146..2248787 | + | 642 | WP_000800512.1 | bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | - |
| J8I92_RS10720 (2248843) | 2248843..2250021 | - | 1179 | WP_000173466.1 | formate-dependent phosphoribosylglycinamide formyltransferase | - |
| J8I92_RS10725 (2250155) | 2250155..2250445 | + | 291 | WP_000257738.1 | DNA damage-inducible protein YebG | - |
| J8I92_RS10730 (2250512) | 2250512..2250868 | + | 357 | WP_001295500.1 | protein YebF | - |
| J8I92_RS10735 (2251195) | 2251195..2251854 | + | 660 | WP_000024728.1 | tellurite resistance TerB family protein | - |
| J8I92_RS10740 (2252063) | 2252063..2254123 | + | 2061 | WP_000936941.1 | oligopeptidase B | - |
| J8I92_RS10745 (2254120) | 2254120..2254782 | - | 663 | WP_000944256.1 | exodeoxyribonuclease X | - |
| J8I92_RS10750 (2254805) | 2254805..2255461 | - | 657 | WP_000011664.1 | carbon-nitrogen hydrolase family protein YobB | - |
| J8I92_RS10755 (2255563) | 2255563..2255793 | - | 231 | WP_000916763.1 | DNA polymerase III subunit theta | - |
| J8I92_RS10760 (2255932) | 2255932..2256306 | + | 375 | WP_000168747.1 | CopC domain-containing protein YobA | - |
| J8I92_RS10765 (2256310) | 2256310..2257182 | + | 873 | WP_000879311.1 | copper homeostasis membrane protein CopD | - |
| J8I92_RS10770 (2257195) | 2257195..2257536 | + | 342 | WP_000977376.1 | YebY family protein | - |
| J8I92_RS10775 (2257927) | 2257927..2259003 | - | 1077 | WP_001189088.1 | hypothetical protein ; Integrase | Integrase |
| J8I92_RS10780 (2258969) | 2258969..2259250 | - | 282 | WP_023234152.1 | excisionase | - |
| - (2259361) | 2259361..2259539 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2259361) | 2259361..2259539 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2259361) | 2259361..2259539 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - (2259361) | 2259361..2259539 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| J8I92_RS10785 (2259357) | 2259357..2259545 | - | 189 | WP_001356607.1 | DUF1187 family protein | - |
| J8I92_RS10790 (2259538) | 2259538..2259732 | - | 195 | WP_042047457.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| J8I92_RS10795 (2259789) | 2259789..2260598 | - | 810 | WP_000166317.1 | recombination protein RecT | - |
| J8I92_RS10800 (2260591) | 2260591..2263266 | - | 2676 | WP_000102215.1 | exodeoxyribonuclease VIII | - |
| J8I92_RS10805 (2263367) | 2263367..2263642 | - | 276 | WP_001519830.1 | phage protein | - |
| J8I92_RS10810 (2263717) | 2263717..2263887 | - | 171 | WP_001359121.1 | YdaE family protein | - |
| J8I92_RS10815 (2263887) | 2263887..2264108 | - | 222 | WP_000560227.1 | cell division protein FtsZ | - |
| J8I92_RS10820 (2264520) | 2264520..2264672 | - | 153 | WP_000379544.1 | DUF1391 family protein | - |
| J8I92_RS10825 (2264978) | 2264978..2265397 | - | 420 | WP_000410105.1 | helix-turn-helix domain-containing protein | - |
| J8I92_RS10830 (2265494) | 2265494..2265736 | + | 243 | WP_001033914.1 | helix-turn-helix transcriptional regulator | - |
| J8I92_RS10835 (2265733) | 2265733..2266155 | + | 423 | WP_000702025.1 | toxin YdaT family protein | - |
| J8I92_RS10840 (2266233) | 2266233..2267021 | + | 789 | WP_001337237.1 | hypothetical protein | - |
| J8I92_RS10845 (2267028) | 2267028..2267774 | + | 747 | WP_000789011.1 | ATP-binding protein | - |
| J8I92_RS10850 (2267797) | 2267797..2268525 | + | 729 | WP_000450715.1 | DUF1627 domain-containing protein | - |
| J8I92_RS10855 (2268540) | 2268540..2268962 | + | 423 | WP_001151121.1 | DUF977 family protein | - |
| J8I92_RS10860 (2269020) | 2269020..2269376 | + | 357 | WP_039720024.1 | hypothetical protein | - |
| J8I92_RS10865 (2269473) | 2269473..2269880 | + | 408 | WP_000829408.1 | hypothetical protein | - |
| J8I92_RS10870 (2269882) | 2269882..2270169 | + | 288 | WP_000212745.1 | hypothetical protein | - |
| J8I92_RS10875 (2270269) | 2270269..2270988 | + | 720 | Protein_2128 | DUF550 domain-containing protein | - |
| J8I92_RS10880 (2271530) | 2271530..2271670 | + | 141 | WP_136757414.1 | type I toxin-antitoxin system toxin HokD | - |
| J8I92_RS10885 (2272245) | 2272245..2272844 | + | 600 | WP_000940333.1 | DUF1367 family protein | - |
| J8I92_RS10890 (2272844) | 2272844..2273134 | + | 291 | WP_000228018.1 | DUF1364 domain-containing protein | - |
| J8I92_RS10895 (2273131) | 2273131..2273685 | + | 555 | WP_000640151.1 | DUF1133 family protein | - |
| J8I92_RS10900 (2273956) | 2273956..2274567 | + | 612 | WP_000211424.1 | ORF6N domain-containing protein | - |
| J8I92_RS10905 (2275065) | 2275065..2275400 | + | 336 | WP_001766841.1 | phage holin, lambda family | - |
| J8I92_RS10910 (2275404) | 2275404..2275880 | + | 477 | WP_054413184.1 | glycoside hydrolase family protein | - |
| J8I92_RS10915 (2275864) | 2275864..2276256 | + | 393 | WP_000776985.1 | DUF2570 domain-containing protein | - |
| J8I92_RS10920 (2276141) | 2276141..2276419 | + | 279 | WP_226109677.1 | hypothetical protein | - |
| J8I92_RS10925 (2276400) | 2276400..2276585 | + | 186 | WP_000113283.1 | hypothetical protein | - |
| J8I92_RS10930 (2276643) | 2276643..2277392 | + | 750 | WP_001118115.1 | hypothetical protein | - |
| J8I92_RS10935 (2277358) | 2277358..2278761 | + | 1404 | WP_000204763.1 | PBSX family phage terminase large subunit | - |
| J8I92_RS10940 (2278761) | 2278761..2280227 | + | 1467 | WP_042095037.1 | DUF1073 domain-containing protein | - |
| J8I92_RS10945 (2280118) | 2280118..2280852 | + | 735 | WP_096977340.1 | phage minor head protein | - |
| J8I92_RS10950 (2280867) | 2280867..2282087 | + | 1221 | WP_096977341.1 | DUF2213 domain-containing protein | - |
| J8I92_RS10955 (2282091) | 2282091..2282597 | + | 507 | WP_096977342.1 | hypothetical protein | - |
| J8I92_RS10960 (2282609) | 2282609..2283550 | + | 942 | WP_282504612.1 | DUF2184 domain-containing protein | - |
| J8I92_RS10965 (2283547) | 2283547..2283780 | - | 234 | WP_161622305.1 | hypothetical protein | - |
| J8I92_RS10970 (2283779) | 2283779..2284186 | + | 408 | WP_001125665.1 | DUF4054 domain-containing protein | - |
| J8I92_RS10975 (2284183) | 2284183..2284737 | + | 555 | WP_096977344.1 | hypothetical protein | - |
| J8I92_RS10980 (2284724) | 2284724..2285113 | + | 390 | WP_096977345.1 | head-tail adaptor | - |
| J8I92_RS10985 (2285088) | 2285088..2285651 | + | 564 | WP_000503647.1 | hypothetical protein | - |
| J8I92_RS10990 (2285655) | 2285655..2286800 | + | 1146 | WP_000046931.1 | DUF3383 family protein | - |
| J8I92_RS10995 (2286811) | 2286811..2287251 | + | 441 | WP_000109249.1 | DUF3277 family protein | - |
| J8I92_RS11000 (2287255) | 2287255..2287707 | + | 453 | WP_042094894.1 | hypothetical protein | - |
| J8I92_RS11005 (2287767) | 2287767..2287904 | + | 138 | WP_226109682.1 | hypothetical protein | - |
| J8I92_RS11010 (2287885) | 2287885..2289873 | + | 1989 | WP_042094905.1 | lytic transglycosylase | - |
| J8I92_RS11015 (2289873) | 2289873..2290460 | + | 588 | WP_001312465.1 | hypothetical protein | - |
| J8I92_RS11020 (2290460) | 2290460..2290762 | + | 303 | WP_072661195.1 | hypothetical protein | - |
| J8I92_RS11025 (2290765) | 2290765..2291829 | + | 1065 | WP_042047568.1 | hypothetical protein | - |
| J8I92_RS11030 (2291832) | 2291832..2292176 | + | 345 | WP_000832851.1 | hypothetical protein | - |
| J8I92_RS11035 (2292189) | 2292189..2292554 | + | 366 | WP_000824817.1 | hypothetical protein | - |
| J8I92_RS11040 (2292621) | 2292621..2293373 | + | 753 | WP_072661194.1 | Gp138 family membrane-puncturing spike protein | - |
| J8I92_RS11045 (2293373) | 2293373..2293726 | + | 354 | WP_001270634.1 | hypothetical protein | - |
| J8I92_RS11050 (2293726) | 2293726..2294925 | + | 1200 | WP_096977346.1 | baseplate J/gp47 family protein | - |
| J8I92_RS11055 (2294922) | 2294922..2295602 | + | 681 | WP_000049950.1 | DUF2612 domain-containing protein | - |
| J8I92_RS11060 (2295602) | 2295602..2295946 | + | 345 | Protein_2165 | hypothetical protein | - |
| J8I92_RS11065 (2297045) | 2297045..2298025 | + | 981 | WP_225522349.1 | tail fiber domain-containing protein | - |
| J8I92_RS11070 (2298882) | 2298882..2299538 | + | 657 | WP_000812743.1 | protein-serine/threonine phosphatase | - |
| J8I92_RS11075 (2299539) | 2299539..2299730 | - | 192 | WP_001296140.1 | YebW family protein | - |
| J8I92_RS11080 (2299835) | 2299835..2300071 | - | 237 | WP_001295499.1 | YebV family protein | - |
| J8I92_RS11085 (2300189) | 2300189..2301628 | - | 1440 | WP_001467894.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| J8I92_RS11090 (2301708) | 2301708..2304341 | - | 2634 | WP_001467892.1 | hypothetical protein | VF |
| J8I92_RS11095 (2304310) | 2304310..2305593 | - | 1284 | WP_001207282.1 | membrane integrity lipid transport subunit YebS | - |
| J8I92_RS11100 (2305723) | 2305723..2306220 | + | 498 | WP_001043884.1 | L-methionine (R)-S-oxide reductase | - |
| J8I92_RS11105 (2306317) | 2306317..2307015 | + | 699 | WP_000431376.1 | RNA chaperone ProQ | - |
| J8I92_RS11110 (2307035) | 2307035..2309083 | + | 2049 | WP_001055805.1 | carboxy terminal-processing peptidase | - |
| J8I92_RS11115 (2309275) | 2309275..2310156 | + | 882 | WP_000984517.1 | protease HtpX | - |
| J8I92_RS11120 (2310202) | 2310202..2311575 | - | 1374 | WP_001127222.1 | MFS transporter | - |
| J8I92_RS11125 (2311752) | 2311752..2312543 | + | 792 | WP_001262188.1 | DNA-binding transcriptional regulator KdgR | - |
| J8I92_RS11130 (2312687) | 2312687..2312926 | - | 240 | WP_001211011.1 | YobH family protein | - |
| J8I92_RS11135 (2313085) | 2313085..2313228 | + | 144 | WP_000714544.1 | PhoP/PhoQ regulator MgrB | - |
| J8I92_RS11140 (2313303) | 2313303..2313590 | + | 288 | WP_001006866.1 | YebO family protein | - |
| J8I92_RS11145 (2314260) | 2314260..2314403 | + | 144 | WP_001295496.1 | DUF2627 domain-containing protein | - |
| J8I92_RS11150 (2314416) | 2314416..2314625 | + | 210 | WP_001062678.1 | transcription antiterminator/RNA stability regulator CspE | - |
| J8I92_RS11155 (2314791) | 2314791..2315600 | + | 810 | WP_000010139.1 | 23S rRNA (guanine(745)-N(1))-methyltransferase | - |
| J8I92_RS11160 (2315597) | 2315597..2316163 | - | 567 | WP_001296134.1 | manganese efflux pump MntP | - |
| J8I92_RS11165 (2316592) | 2316592..2317050 | - | 459 | WP_000156255.1 | DUF986 family protein | - |
| J8I92_RS11170 (2317105) | 2317105..2317956 | - | 852 | WP_000228655.1 | PTS mannose transporter subunit IID | - |
| J8I92_RS11175 (2317969) | 2317969..2318769 | - | 801 | WP_000406926.1 | PTS mannose transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|