MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 38920 bp
Accession: NZ_CP072687 Location: 1198614..1237533 Organism: Escherichia coli strain YP3 Replicon: chromosome
Accession: NZ_CP072687 Location: 1198614..1237533 Organism: Escherichia coli strain YP3 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8I95_RS05790 (1194006) | 1194006..1194644 | - | 639 | WP_001278992.1 | aldolase | - |
| J8I95_RS05795 (1194641) | 1194641..1195903 | - | 1263 | WP_000590416.1 | four-carbon acid sugar kinase family protein | - |
| J8I95_RS05800 (1195900) | 1195900..1196808 | - | 909 | WP_000847998.1 | NAD(P)-dependent oxidoreductase | - |
| J8I95_RS05805 (1197004) | 1197004..1197771 | + | 768 | WP_001298167.1 | DNA-binding transcriptional repressor YgbI | - |
| J8I95_RS05810 (1197822) | 1197822..1198478 | - | 657 | WP_001141304.1 | protein-serine/threonine phosphatase | - |
| J8I95_RS05815 (1198584) | 1198584..1201151 | - | 2568 | WP_001467843.1 | DNA mismatch repair protein MutS | - |
| J8I95_RS05820 (1201298) | 1201298..1202755 | + | 1458 | WP_000784515.1 | hypothetical protein ; Integrase | Integrase |
| J8I95_RS05825 (1202767) | 1202767..1203351 | + | 585 | WP_001272879.1 | hypothetical protein | - |
| J8I95_RS05830 (1203511) | 1203511..1204494 | + | 984 | WP_000020904.1 | hypothetical protein | - |
| J8I95_RS05835 (1204619) | 1204619..1205134 | - | 516 | WP_000611155.1 | helix-turn-helix domain-containing protein | - |
| J8I95_RS05840 (1206047) | 1206047..1206472 | + | 426 | WP_000336170.1 | hypothetical protein | - |
| J8I95_RS05845 (1206605) | 1206605..1206877 | - | 273 | WP_000043831.1 | hypothetical protein | - |
| J8I95_RS05850 (1207057) | 1207057..1208256 | - | 1200 | WP_001536248.1 | relaxase/mobilization nuclease domain-containing protein | - |
| J8I95_RS05855 (1208225) | 1208225..1208662 | - | 438 | WP_001536247.1 | hypothetical protein | - |
| J8I95_RS05860 (1208924) | 1208924..1210732 | + | 1809 | WP_000710784.1 | DUF4209 domain-containing protein | - |
| J8I95_RS05865 (1211804) | 1211804..1212148 | + | 345 | WP_000015482.1 | nitrous oxide-stimulated promoter family protein | - |
| J8I95_RS05870 (1212187) | 1212187..1212615 | - | 429 | WP_000301062.1 | TOBE domain-containing protein | - |
| J8I95_RS05875 (1212660) | 1212660..1214738 | - | 2079 | WP_000122674.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| J8I95_RS05880 (1214812) | 1214812..1215822 | - | 1011 | WP_001059916.1 | hydrogenase maturation carbamoyl dehydratase HypE | - |
| J8I95_RS05885 (1215819) | 1215819..1216940 | - | 1122 | WP_001212967.1 | hydrogenase formation protein HypD | - |
| J8I95_RS05890 (1216940) | 1216940..1217212 | - | 273 | WP_000334881.1 | hydrogenase 3 maturation protein HypC | - |
| J8I95_RS05895 (1217203) | 1217203..1218075 | - | 873 | WP_000337654.1 | hydrogenase nickel incorporation protein HypB | - |
| J8I95_RS05900 (1218079) | 1218079..1218429 | - | 351 | WP_001299100.1 | hydrogenase maturation nickel metallochaperone HypA | - |
| J8I95_RS05905 (1218641) | 1218641..1219102 | + | 462 | WP_000158056.1 | formate hydrogenlyase regulator HycA | - |
| J8I95_RS05910 (1219227) | 1219227..1219838 | + | 612 | WP_001079173.1 | formate hydrogenlyase subunit HycB | - |
| J8I95_RS05915 (1219835) | 1219835..1221661 | + | 1827 | WP_001274429.1 | formate hydrogenlyase subunit 3 | - |
| J8I95_RS05920 (1221664) | 1221664..1222587 | + | 924 | WP_000115226.1 | formate hydrogenlyase subunit HycD | - |
| J8I95_RS05925 (1222605) | 1222605..1224314 | + | 1710 | WP_001288123.1 | formate hydrogenlyase subunit HycE | - |
| J8I95_RS05930 (1224324) | 1224324..1224866 | + | 543 | WP_000493800.1 | formate hydrogenlyase subunit HycF | - |
| J8I95_RS05935 (1224866) | 1224866..1225633 | + | 768 | WP_000067399.1 | formate hydrogenlyase subunit HycG | - |
| J8I95_RS05940 (1225630) | 1225630..1226040 | + | 411 | WP_001291918.1 | formate hydrogenlyase assembly protein HycH | - |
| J8I95_RS05945 (1226033) | 1226033..1226500 | + | 468 | WP_000132955.1 | hydrogenase maturation peptidase HycI | - |
| J8I95_RS05950 (1226543) | 1226543..1227298 | + | 756 | WP_001314074.1 | hypothetical protein | - |
| J8I95_RS05955 (1227461) | 1227461..1227772 | + | 312 | WP_000547563.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| J8I95_RS05960 (1227769) | 1227769..1228188 | + | 420 | WP_000126304.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| J8I95_RS05965 (1228280) | 1228280..1228708 | - | 429 | WP_000536066.1 | DUF4259 domain-containing protein | - |
| J8I95_RS05970 (1229093) | 1229093..1229620 | + | 528 | WP_001078777.1 | electron transport protein HydN | - |
| J8I95_RS05975 (1229773) | 1229773..1232025 | + | 2253 | WP_001467844.1 | carbamoyltransferase HypF | - |
| J8I95_RS05980 (1232249) | 1232249..1233382 | - | 1134 | WP_000064713.1 | NADH:flavorubredoxin reductase NorW | - |
| J8I95_RS05985 (1233379) | 1233379..1234818 | - | 1440 | WP_000029647.1 | anaerobic nitric oxide reductase flavorubredoxin | - |
| J8I95_RS05990 (1235005) | 1235005..1236519 | + | 1515 | WP_000010760.1 | Anaerobic nitric oxide reductase transcription regulator NorR | VF |
| J8I95_RS05995 (1236516) | 1236516..1237481 | - | 966 | WP_001287423.1 | hypothetical protein | VF |
| J8I95_RS06000 (1237474) | 1237474..1238247 | - | 774 | WP_000804544.1 | glucitol operon DNA-binding transcriptional repressor SrlR | - |
| J8I95_RS06005 (1238314) | 1238314..1238673 | - | 360 | WP_000252912.1 | transcriptional regulator GutM | - |
| J8I95_RS06010 (1238779) | 1238779..1239558 | - | 780 | WP_001077354.1 | sorbitol-6-phosphate dehydrogenase | - |
| J8I95_RS06015 (1239562) | 1239562..1239933 | - | 372 | WP_000216207.1 | PTS glucitol/sorbitol transporter subunit IIA | - |
| J8I95_RS06020 (1239944) | 1239944..1240903 | - | 960 | WP_000196942.1 | PTS glucitol/sorbitol transporter subunit IIB | - |
| J8I95_RS06025 (1240900) | 1240900..1241463 | - | 564 | WP_000573321.1 | PTS glucitol/sorbitol transporter subunit IIC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|