MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 130875 bp
Accession: NZ_CP072616 Location: 1..130875 Organism: Sulfitobacter sp. CB2047 Replicon: plasmid pSpoCB-3
Accession: NZ_CP072616 Location: 1..130875 Organism: Sulfitobacter sp. CB2047 Replicon: plasmid pSpoCB-3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IV89_RS17710 (IV89_003543) | 214..492 | - | 279 | WP_037945267.1 | VirB3 family type IV secretion system protein | - |
| IV89_RS17715 (IV89_003544) | 485..778 | - | 294 | WP_037945265.1 | Type IV secretion system protein virB2 | VF |
| IV89_RS17720 (IV89_003545) | 775..1395 | - | 621 | WP_037945263.1 | lytic transglycosylase domain-containing protein | - |
| IV89_RS17725 (IV89_003546) | 1439..1792 | - | 354 | WP_037945262.1 | hypothetical protein | - |
| IV89_RS17730 (IV89_003547) | 1982..2263 | + | 282 | WP_037945260.1 | hypothetical protein | - |
| IV89_RS17735 (IV89_003548) | 2297..2509 | - | 213 | WP_081858814.1 | helix-turn-helix transcriptional regulator | - |
| IV89_RS17740 (IV89_003549) | 2864..3118 | + | 255 | WP_146152957.1 | hypothetical protein | - |
| IV89_RS18660 (IV89_003550) | 3498..3602 | - | 105 | WP_200875472.1 | FAD-linked oxidase C-terminal domain-containing protein | - |
| IV89_RS17745 (IV89_003551) | 3624..4750 | - | 1127 | Protein_9 | IS3 family transposase ISRosp5 | Transposase |
| IV89_RS17750 (IV89_003552) | 5051..6001 | + | 951 | WP_037945258.1 | Urease operon transcriptional activator | VF |
| IV89_RS17755 (IV89_003553) | 6075..7571 | + | 1497 | WP_051844025.1 | aldehyde dehydrogenase family protein | - |
| IV89_RS17760 (IV89_003554) | 7657..9396 | + | 1740 | WP_051844023.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| IV89_RS17765 (IV89_003555) | 9535..10245 | + | 711 | WP_037945257.1 | IS6 family transposase ISPpa9 | Transposase |
| IV89_RS17770 (IV89_003556) | 10355..10999 | + | 645 | WP_051844020.1 | hypothetical protein | - |
| IV89_RS17775 (IV89_003557) | 11194..12315 | + | 1122 | WP_276312665.1 | muconate/chloromuconate family cycloisomerase | - |
| IV89_RS17780 (IV89_003558) | 12386..13774 | + | 1389 | WP_037945253.1 | benzoate 1,2-dioxygenase large subunit | - |
| IV89_RS17785 (IV89_003559) | 13788..14315 | + | 528 | WP_037945251.1 | benzoate 1,2-dioxygenase small subunit | - |
| IV89_RS17790 (IV89_003560) | 14386..15408 | + | 1023 | WP_037945250.1 | benzoate 1,2-dioxygenase electron transfer component BenC | - |
| IV89_RS17795 (IV89_003561) | 15405..16184 | + | 780 | WP_037945249.1 | 3-beta-hydroxycholanate 3-dehydrogenase (NADP(+)) | VF |
| IV89_RS17800 (IV89_003562) | 16227..17399 | + | 1173 | WP_037945248.1 | ABC transporter substrate-binding protein | - |
| IV89_RS17805 (IV89_003563) | 17457..18326 | + | 870 | WP_037945247.1 | branched-chain amino acid ABC transporter permease | - |
| IV89_RS17810 (IV89_003564) | 18331..19335 | + | 1005 | WP_037945245.1 | branched-chain amino acid ABC transporter permease | - |
| IV89_RS17815 (IV89_003565) | 19328..20071 | + | 744 | WP_037945244.1 | Lipopolysaccharide export system ATP-binding protein LptB | VF |
| IV89_RS17820 (IV89_003566) | 20064..20762 | + | 699 | WP_037945243.1 | High-affinity branched-chain amino acid transport ATP-binding protein LivF | VF |
| IV89_RS17825 (IV89_003567) | 20802..21692 | - | 891 | WP_037945242.1 | HTH-type transcriptional regulator BenM | VF |
| IV89_RS17830 (IV89_003568) | 21791..22666 | - | 876 | WP_037945240.1 | dioxygenase | - |
| IV89_RS17835 (IV89_003569) | 22954..23334 | + | 381 | WP_037945238.1 | hypothetical protein | - |
| IV89_RS17840 (IV89_003570) | 23331..24188 | + | 858 | WP_037945237.1 | alpha/beta hydrolase | - |
| IV89_RS17845 (IV89_003571) | 24425..25285 | + | 861 | WP_037945236.1 | 3-keto-5-aminohexanoate cleavage protein | - |
| IV89_RS17850 (IV89_003572) | 25282..25986 | + | 705 | WP_037945235.1 | CoA transferase subunit A | - |
| IV89_RS17855 (IV89_003573) | 25986..26609 | + | 624 | WP_037945233.1 | 3-oxoacid CoA-transferase subunit B | - |
| IV89_RS17860 (IV89_003574) | 26602..27810 | + | 1209 | WP_037945232.1 | benzoate/H(+) symporter BenE family transporter | - |
| IV89_RS17865 (IV89_003575) | 27894..28553 | + | 660 | Protein_33 | NADP-dependent malic enzyme | - |
| IV89_RS17870 (IV89_003576) | 28638..29992 | + | 1355 | WP_107277721.1 | IS3 family transposase ISSsp2 | Transposase |
| IV89_RS17875 (IV89_003577) | 30247..31968 | - | 1722 | WP_037945227.1 | GMC family oxidoreductase N-terminal domain-containing protein | - |
| IV89_RS17880 (IV89_003578) | 32032..33483 | - | 1452 | WP_037945225.1 | aldehyde dehydrogenase | - |
| IV89_RS17885 (IV89_003579) | 33631..34191 | - | 561 | WP_051844016.1 | maleylpyruvate isomerase N-terminal domain-containing protein | - |
| IV89_RS17890 (IV89_003580) | 34191..35255 | - | 1065 | WP_051844029.1 | cupin domain-containing protein | - |
| IV89_RS17895 (IV89_003581) | 35291..35935 | - | 645 | WP_037945221.1 | maleylacetoacetate isomerase | - |
| IV89_RS17900 (IV89_003582) | 35947..36771 | - | 825 | WP_037945219.1 | universal stress protein | - |
| IV89_RS17905 (IV89_003583) | 36796..37494 | - | 699 | WP_037945217.1 | fumarylacetoacetate hydrolase family protein | - |
| IV89_RS17910 (IV89_003584) | 37530..39437 | - | 1908 | WP_200875476.1 | TRAP transporter fused permease subunit | - |
| IV89_RS17915 (IV89_003585) | 39552..40520 | - | 969 | WP_037945214.1 | TAXI family TRAP transporter solute-binding subunit | - |
| IV89_RS17920 (IV89_003586) | 40550..43294 | - | 2745 | WP_037945212.1 | benzoate-CoA ligase family protein | - |
| IV89_RS17925 (IV89_003587) | 43404..44546 | - | 1143 | WP_037945211.1 | FAD-dependent monooxygenase | - |
| IV89_RS17930 (IV89_003588) | 44633..45040 | + | 408 | WP_037945210.1 | acyl-CoA thioesterase | - |
| IV89_RS17935 (IV89_003589) | 45033..45848 | + | 816 | WP_081858813.1 | IclR family transcriptional regulator | - |
| IV89_RS17945 (IV89_003591) | 47388..48287 | - | 900 | Protein_49 | muconate/chloromuconate family cycloisomerase | - |
| IV89_RS17950 (IV89_003592) | 48422..49411 | - | 990 | WP_037945206.1 | branched-chain amino acid ABC transporter permease | - |
| IV89_RS17955 (IV89_003593) | 49416..50279 | - | 864 | WP_037945204.1 | branched-chain amino acid ABC transporter permease | - |
| IV89_RS17960 (IV89_003594) | 50279..50995 | - | 717 | WP_037945202.1 | ABC transporter ATP-binding protein | - |
| IV89_RS17965 (IV89_003595) | 50992..51711 | - | 720 | WP_037945201.1 | ABC transporter ATP-binding protein | - |
| IV89_RS17970 (IV89_003596) | 51781..53049 | - | 1269 | WP_037945200.1 | ABC transporter substrate-binding protein | - |
| IV89_RS17975 (IV89_003597) | 53659..54414 | + | 756 | WP_235183821.1 | hypothetical protein | - |
| IV89_RS17980 (IV89_003598) | 54657..57368 | + | 2712 | WP_146152955.1 | hypothetical protein | - |
| IV89_RS17985 (IV89_003599) | 57331..58002 | - | 672 | WP_107277719.1 | class I SAM-dependent methyltransferase | - |
| IV89_RS17990 (IV89_003600) | 57995..59251 | - | 1257 | WP_037945197.1 | hypothetical protein | - |
| IV89_RS17995 (IV89_003601) | 59607..61394 | + | 1788 | WP_146152954.1 | hypothetical protein | - |
| IV89_RS18000 (IV89_003602) | 61658..62473 | - | 816 | WP_037945193.1 | PKD domain-containing protein | - |
| IV89_RS18005 (IV89_003603) | 62551..64308 | - | 1758 | WP_081858811.1 | phospholipase D-like domain-containing protein | - |
| IV89_RS18015 (IV89_003605) | 66000..67052 | + | 1053 | WP_037945186.1 | hypothetical protein | - |
| IV89_RS18020 (IV89_003606) | 67049..67567 | + | 519 | WP_037945184.1 | GIY-YIG nuclease family protein | - |
| IV89_RS18025 (IV89_003607) | 68002..68319 | + | 318 | WP_037945182.1 | type II toxin-antitoxin system MqsR family toxin | - |
| IV89_RS18030 (IV89_003608) | 68312..68749 | + | 438 | WP_037945180.1 | type II toxin-antitoxin system MqsA family antitoxin | - |
| IV89_RS18035 (IV89_003609) | 68761..70020 | + | 1260 | WP_037945178.1 | Swt1 family HEPN domain-containing protein | - |
| IV89_RS18040 | 70386..71291 | - | 906 | WP_235183820.1 | hypothetical protein | - |
| IV89_RS18045 (IV89_003611) | 71295..71537 | - | 243 | WP_146152953.1 | hypothetical protein | - |
| IV89_RS18050 (IV89_003612) | 71912..72292 | + | 381 | WP_081858810.1 | mCpol domain-containing protein | - |
| IV89_RS18055 (IV89_003613) | 72280..72894 | + | 615 | WP_037945177.1 | hypothetical protein | - |
| IV89_RS18060 (IV89_003614) | 72912..73709 | - | 798 | WP_037945176.1 | hypothetical protein | - |
| IV89_RS18065 (IV89_003615) | 73875..75158 | + | 1284 | WP_037945175.1 | hypothetical protein | - |
| IV89_RS18070 (IV89_003616) | 75112..76938 | + | 1827 | WP_081858809.1 | ThiF family adenylyltransferase | - |
| IV89_RS18075 (IV89_003618) | 77623..79320 | + | 1698 | WP_037945173.1 | hypothetical protein | - |
| IV89_RS18080 (IV89_003619) | 79317..81011 | + | 1695 | WP_037945171.1 | hypothetical protein | - |
| IV89_RS18085 (IV89_003620) | 81092..81637 | - | 546 | WP_037945170.1 | Tn3 family transposase TnpR_ISAzs17 | Transposase |
| IV89_RS18090 (IV89_003621) | 81832..83370 | - | 1539 | WP_037945168.1 | Fic family protein | - |
| IV89_RS18095 (IV89_003622) | 83643..84242 | - | 600 | WP_037945164.1 | SMC-Scp complex subunit ScpB | - |
| IV89_RS18100 (IV89_003623) | 84244..85137 | - | 894 | WP_037945163.1 | DUF1403 family protein | - |
| IV89_RS18105 (IV89_003624) | 85251..86369 | + | 1119 | WP_235183819.1 | tyrosine-type recombinase/integrase | - |
| IV89_RS18110 (IV89_003625) | 86810..87994 | + | 1185 | WP_037945162.1 | plasmid partitioning protein RepA | - |
| IV89_RS18115 (IV89_003626) | 87994..88989 | + | 996 | WP_037945161.1 | plasmid partitioning protein RepB | - |
| IV89_RS18120 (IV89_003627) | 89114..90211 | + | 1098 | WP_235183818.1 | helix-turn-helix domain-containing protein | - |
| IV89_RS18125 (IV89_003628) | 90343..90813 | + | 471 | WP_037945160.1 | hypothetical protein | - |
| IV89_RS18130 (IV89_003629) | 90855..91787 | + | 933 | WP_037945158.1 | zincin-like metallopeptidase domain-containing protein | - |
| IV89_RS18135 (IV89_003630) | 91878..92267 | + | 390 | WP_037945157.1 | DUF3768 domain-containing protein | - |
| IV89_RS18140 (IV89_003631) | 92418..93458 | + | 1041 | WP_037945156.1 | IS110 family transposase ISRhru3 | Transposase |
| IV89_RS18145 (IV89_003632) | 94045..96027 | + | 1983 | WP_037945155.1 | ParB/RepB/Spo0J family partition protein | - |
| IV89_RS18150 (IV89_003633) | 96111..96704 | + | 594 | WP_037945154.1 | hypothetical protein | - |
| IV89_RS18155 (IV89_003634) | 96704..97360 | + | 657 | WP_037945153.1 | hypothetical protein | - |
| IV89_RS18160 (IV89_003635) | 97429..97722 | + | 294 | WP_037945151.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| IV89_RS18165 (IV89_003636) | 97715..97990 | + | 276 | WP_037945150.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| IV89_RS18170 (IV89_003637) | 98103..102365 | + | 4263 | WP_037945149.1 | strawberry notch family protein | - |
| IV89_RS18175 (IV89_003638) | 102476..102691 | + | 216 | WP_037945148.1 | hypothetical protein | - |
| IV89_RS18180 (IV89_003639) | 102902..103630 | + | 729 | WP_037945147.1 | DUF736 family protein | - |
| IV89_RS18185 (IV89_003640) | 103989..105269 | + | 1281 | WP_037945146.1 | hypothetical protein | - |
| IV89_RS18190 | 105452..106012 | - | 561 | WP_146152952.1 | hypothetical protein | - |
| IV89_RS18195 (IV89_003641) | 106188..108041 | - | 1854 | WP_146152951.1 | hypothetical protein | - |
| IV89_RS18200 (IV89_003642) | 108038..108538 | - | 501 | WP_051844012.1 | hypothetical protein | - |
| IV89_RS18205 (IV89_003643) | 108526..109557 | - | 1032 | WP_037945143.1 | hypothetical protein | - |
| IV89_RS18210 (IV89_003644) | 110480..111409 | + | 930 | WP_037945142.1 | DUF2493 domain-containing protein | - |
| IV89_RS18215 (IV89_003646) | 113082..113288 | + | 207 | WP_037945139.1 | hypothetical protein | - |
| IV89_RS18220 (IV89_003647) | 113862..114443 | + | 582 | WP_037945138.1 | hypothetical protein | - |
| IV89_RS18225 (IV89_003648) | 114430..116679 | + | 2250 | WP_037945137.1 | T-DNA border endonuclease VirD2 | Relaxase |
| IV89_RS18230 (IV89_003649) | 116688..118694 | + | 2007 | WP_037945136.1 | type IV secretory system conjugative DNA transfer family protein | - |
| IV89_RS18235 (IV89_003650) | 118834..119154 | - | 321 | WP_037945134.1 | hypothetical protein | - |
| IV89_RS18240 (IV89_003651) | 119301..120359 | + | 1059 | WP_037945132.1 | IS110 family transposase ISSpo1 | Transposase |
| IV89_RS18245 (IV89_003652) | 120779..120943 | - | 165 | WP_160171656.1 | hypothetical protein | - |
| IV89_RS18250 (IV89_003653) | 120946..122022 | - | 1077 | WP_037945130.1 | type IV secretion system protein | - |
| IV89_RS18255 (IV89_003654) | 122035..122445 | - | 411 | WP_037945275.1 | hypothetical protein | - |
| IV89_RS18260 (IV89_003655) | 122445..122648 | - | 204 | WP_037945128.1 | hypothetical protein | - |
| IV89_RS18265 (IV89_003656) | 122645..123631 | - | 987 | WP_037945127.1 | Type IV secretion system protein VirB11 | VF |
| IV89_RS18270 (IV89_003657) | 123635..125029 | - | 1395 | WP_037945125.1 | Type IV secretion system protein PtlG | VF |
| IV89_RS18275 (IV89_003658) | 125026..125823 | - | 798 | WP_240558222.1 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| IV89_RS18280 (IV89_003659) | 125823..126476 | - | 654 | WP_037945272.1 | type IV secretion system protein | - |
| IV89_RS18285 (IV89_003660) | 126592..127407 | - | 816 | WP_037945269.1 | type IV secretion system protein | - |
| IV89_RS18290 (IV89_003661) | 127407..128534 | - | 1128 | WP_051844030.1 | lytic transglycosylase domain-containing protein | - |
| IV89_RS18295 (IV89_003662) | 128551..128727 | - | 177 | WP_200875473.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|