MGE detailed information
MGE type: Genomic_island MGE length: 24473 bp
Accession: NZ_CP072566 Location: 3701171..3725643 Organism: Escherichia coli strain WG5::TT12A Replicon: chromosome
Accession: NZ_CP072566 Location: 3701171..3725643 Organism: Escherichia coli strain WG5::TT12A Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8F85_RS17895 (3696188) | 3696188..3696540 | - | 353 | Protein_3515 | peptide chain release factor H | - |
| J8F85_RS17900 (3696536) | 3696536..3696742 | - | 207 | Protein_3516 | RtcB family protein | - |
| J8F85_RS17905 (3697059) | 3697059..3697511 | - | 453 | WP_071780660.1 | GNAT family N-acetyltransferase | - |
| J8F85_RS17910 (3697508) | 3697508..3698563 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| J8F85_RS17915 (3698634) | 3698634..3699419 | - | 786 | WP_000207555.1 | putative lateral flagellar export/assembly protein LafU | - |
| J8F85_RS17920 (3699391) | 3699391..3701113 | + | 1723 | Protein_3520 | flagellar biosynthesis protein FlhA | - |
| J8F85_RS17925 (3701192) | 3701192..3701548 | + | 357 | WP_047402977.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| J8F85_RS17930 (3701605) | 3701605..3702378 | - | 774 | WP_122990173.1 | Murein DD-endopeptidase MepH | VF |
| J8F85_RS17935 (3702564) | 3702564..3702824 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| J8F85_RS17940 (3702827) | 3702827..3703105 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| J8F85_RS17945 (3703261) | 3703261..3704001 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| J8F85_RS17950 (3703972) | 3703972..3704739 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| J8F85_RS17955 (3704948) | 3704948..3705526 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| J8F85_RS17960 (3705766) | 3705766..3708210 | + | 2445 | WP_047402958.1 | Acyl-coenzyme A dehydrogenase | VF |
| J8F85_RS17965 (3708253) | 3708253..3708699 | - | 447 | WP_047402973.1 | Ivy family C-type lysozyme inhibitor | - |
| J8F85_RS17970 (3708880) | 3708880..3709650 | + | 771 | WP_001118041.1 | 2-oxoglutaramate amidase | - |
| J8F85_RS17975 (3709708) | 3709708..3710076 | - | 369 | Protein_3531 | ISAs1 family transposase | - |
| J8F85_RS17980 (3710122) | 3710122..3711258 | - | 1137 | Protein_3532 | ISAs1 family transposase ISEc1 | Transposase |
| J8F85_RS17985 (3712004) | 3712004..3712513 | - | 510 | WP_001419315.1 | sel1 repeat family protein | - |
| J8F85_RS17990 (3712582) | 3712582..3714066 | - | 1485 | Protein_3534 | Protein RhsD | VF |
| J8F85_RS17995 (3714272) | 3714272..3715009 | - | 738 | WP_001625207.1 | hypothetical protein | VF |
| J8F85_RS18000 (3715113) | 3715113..3715604 | - | 492 | WP_072035598.1 | hypothetical protein | - |
| J8F85_RS18010 (3715731) | 3715731..3716867 | - | 1137 | WP_053889911.1 | ISAs1 family transposase ISEc1 | Transposase |
| J8F85_RS18015 (3717216) | 3717216..3717596 | - | 381 | WP_001438978.1 | hypothetical protein | - |
| J8F85_RS18020 (3717613) | 3717613..3718903 | - | 1291 | Protein_3539 | Protein RhsD | VF |
| J8F85_RS18025 (3719041) | 3719041..3719262 | + | 222 | WP_236941923.1 | hypothetical protein | VF |
| J8F85_RS18030 (3719305) | 3719305..3719460 | + | 156 | WP_001381465.1 | hypothetical protein | - |
| J8F85_RS18035 (3719484) | 3719484..3719966 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| J8F85_RS18040 (3720010) | 3720010..3720924 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| J8F85_RS18045 (3720934) | 3720934..3721413 | + | 480 | WP_001236652.1 | protein YkfM | - |
| J8F85_RS18050 (3721550) | 3721550..3722335 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| J8F85_RS18060 (3722872) | 3722872..3723603 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| J8F85_RS18065 (3723668) | 3723668..3724135 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| J8F85_RS18070 (3724132) | 3724132..3724854 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| J8F85_RS18075 (3724888) | 3724888..3725643 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| J8F85_RS18080 (3725715) | 3725715..3727073 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| J8F85_RS18085 (3727121) | 3727121..3727891 | - | 771 | WP_000211686.1 | class I SAM-dependent methyltransferase | - |
| J8F85_RS18090 (3727969) | 3727969..3728769 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| J8F85_RS18095 (3729010) | 3729010..3729924 | + | 915 | WP_000648583.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Genomic island | TA75077 | NZ_CP020543 | 3657894..3682366 | 0 |