MGE detailed information
MGE type: Genomic_island MGE length: 24473 bp
Accession: NZ_CP072565 Location: 3701496..3725968 Organism: Escherichia coli strain WG5::PA8 Replicon: chromosome
Accession: NZ_CP072565 Location: 3701496..3725968 Organism: Escherichia coli strain WG5::PA8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8F86_RS17840 (3696513) | 3696513..3696865 | - | 353 | Protein_3504 | peptide chain release factor H | - |
| J8F86_RS17845 (3696861) | 3696861..3697067 | - | 207 | Protein_3505 | RtcB family protein | - |
| J8F86_RS17850 (3697384) | 3697384..3697836 | - | 453 | WP_071780660.1 | GNAT family N-acetyltransferase | - |
| J8F86_RS17855 (3697833) | 3697833..3698888 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| J8F86_RS17860 (3698959) | 3698959..3699744 | - | 786 | WP_000207555.1 | putative lateral flagellar export/assembly protein LafU | - |
| J8F86_RS17865 (3699716) | 3699716..3701438 | + | 1723 | Protein_3509 | flagellar biosynthesis protein FlhA | - |
| J8F86_RS17870 (3701517) | 3701517..3701873 | + | 357 | WP_047402977.1 | type II toxin-antitoxin system HicB family antitoxin | - |
| J8F86_RS17875 (3701930) | 3701930..3702703 | - | 774 | WP_122990173.1 | Murein DD-endopeptidase MepH | VF |
| J8F86_RS17880 (3702889) | 3702889..3703149 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| J8F86_RS17885 (3703152) | 3703152..3703430 | + | 279 | WP_000615979.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| J8F86_RS17890 (3703586) | 3703586..3704326 | + | 741 | WP_001225679.1 | peptidoglycan meso-diaminopimelic acid protein amidase | - |
| J8F86_RS17895 (3704297) | 3704297..3705064 | - | 768 | WP_000333380.1 | class II glutamine amidotransferase | - |
| J8F86_RS17900 (3705273) | 3705273..3705851 | - | 579 | WP_000284050.1 | Phosphoheptose isomerase | VF |
| J8F86_RS17905 (3706091) | 3706091..3708535 | + | 2445 | WP_047402958.1 | Acyl-coenzyme A dehydrogenase | VF |
| J8F86_RS17910 (3708578) | 3708578..3709024 | - | 447 | WP_047402973.1 | Ivy family C-type lysozyme inhibitor | - |
| J8F86_RS17915 (3709205) | 3709205..3709975 | + | 771 | WP_001118041.1 | 2-oxoglutaramate amidase | - |
| J8F86_RS17920 (3710033) | 3710033..3710401 | - | 369 | Protein_3520 | ISAs1 family transposase | - |
| J8F86_RS17925 (3710447) | 3710447..3711583 | - | 1137 | Protein_3521 | ISAs1 family transposase ISEc1 | Transposase |
| J8F86_RS17930 (3712329) | 3712329..3712838 | - | 510 | WP_001419315.1 | sel1 repeat family protein | - |
| J8F86_RS17935 (3712907) | 3712907..3714391 | - | 1485 | Protein_3523 | Protein RhsD | VF |
| J8F86_RS17940 (3714597) | 3714597..3715334 | - | 738 | WP_001625207.1 | hypothetical protein | VF |
| J8F86_RS17945 (3715438) | 3715438..3715929 | - | 492 | WP_072035598.1 | hypothetical protein | - |
| J8F86_RS17955 (3716056) | 3716056..3717192 | - | 1137 | WP_053889911.1 | ISAs1 family transposase ISEc1 | Transposase |
| J8F86_RS17960 (3717541) | 3717541..3717921 | - | 381 | WP_001438978.1 | hypothetical protein | - |
| J8F86_RS17965 (3717938) | 3717938..3719228 | - | 1291 | Protein_3528 | Protein RhsD | VF |
| J8F86_RS17970 (3719366) | 3719366..3719587 | + | 222 | WP_236941923.1 | hypothetical protein | VF |
| J8F86_RS17975 (3719630) | 3719630..3719785 | + | 156 | WP_001381465.1 | hypothetical protein | - |
| J8F86_RS17980 (3719809) | 3719809..3720291 | + | 483 | WP_001284199.1 | Major exported protein | VF |
| J8F86_RS17985 (3720335) | 3720335..3721249 | + | 915 | WP_000908057.1 | hypothetical protein | - |
| J8F86_RS17990 (3721259) | 3721259..3721738 | + | 480 | WP_001236652.1 | protein YkfM | - |
| J8F86_RS17995 (3721875) | 3721875..3722660 | - | 786 | WP_001086142.1 | aminopeptidase | - |
| J8F86_RS18005 (3723197) | 3723197..3723928 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| J8F86_RS18010 (3723993) | 3723993..3724460 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| J8F86_RS18015 (3724457) | 3724457..3725179 | - | 723 | WP_001295200.1 | class I SAM-dependent methyltransferase | - |
| J8F86_RS18020 (3725213) | 3725213..3725968 | + | 756 | WP_001052721.1 | hydroxyacylglutathione hydrolase | - |
| J8F86_RS18025 (3726040) | 3726040..3727398 | + | 1359 | WP_000644685.1 | murein transglycosylase D | - |
| J8F86_RS18030 (3727446) | 3727446..3728216 | - | 771 | WP_000211686.1 | class I SAM-dependent methyltransferase | - |
| J8F86_RS18035 (3728294) | 3728294..3729094 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| J8F86_RS18040 (3729335) | 3729335..3730249 | + | 915 | WP_000648583.1 | DNA-binding transcriptional regulator YafC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli C | Genomic island | TA75077 | NZ_CP020543 | 3657894..3682366 | 0 |