MGE detailed information
MGE type: Prophage MGE length: 34112 bp
Accession: NZ_CP072565 Location: 2320443..2354554 Organism: Escherichia coli strain WG5::PA8 Replicon: chromosome
Accession: NZ_CP072565 Location: 2320443..2354554 Organism: Escherichia coli strain WG5::PA8 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J8F86_RS11175 (2316999) | 2316999..2318684 | - | 1686 | Protein_2192 | molybdopterin-dependent oxidoreductase | - |
| J8F86_RS11180 (2318676) | 2318676..2319224 | + | 549 | Protein_2193 | starvation-sensing protein RspA | - |
| J8F86_RS11185 (2319236) | 2319236..2320255 | + | 1020 | WP_000836066.1 | Zn-dependent oxidoreductase | - |
| J8F86_RS11190 (2320443) | 2320443..2321723 | - | 1281 | WP_000876986.1 | Putative defective protein IntQ ; Integrase | Integrase |
| J8F86_RS11195 (2321758) | 2321758..2322009 | - | 252 | WP_000005552.1 | excisionase family protein | - |
| J8F86_RS11200 (2322082) | 2322082..2324553 | - | 2472 | WP_081508834.1 | exonuclease | - |
| J8F86_RS11205 (2324646) | 2324646..2324837 | - | 192 | WP_001083297.1 | lysis protein YdfD | - |
| J8F86_RS11210 (2324834) | 2324834..2325022 | - | 189 | WP_000854559.1 | cell division inhibition protein DicB | - |
| J8F86_RS11215 (2325590) | 2325590..2325808 | - | 219 | WP_001171942.1 | protein YdfC | - |
| J8F86_RS22455 (2325838) | 2325838..2325966 | - | 129 | WP_000344964.1 | protein YdfB | - |
| J8F86_RS11220 (2325968) | 2325968..2326123 | - | 156 | WP_000379575.1 | DUF1391 family protein | - |
| J8F86_RS11225 (2326290) | 2326290..2326697 | - | 408 | WP_000448564.1 | DNA-binding transcriptional dual regulator DicA | - |
| J8F86_RS11230 (2326781) | 2326781..2327011 | + | 231 | WP_000920568.1 | dicB transcriptional regulator DicC | - |
| J8F86_RS11235 (2326995) | 2326995..2327417 | + | 423 | Protein_2205 | toxin YdaT family protein | - |
| J8F86_RS11240 (2327635) | 2327635..2328056 | + | 422 | Protein_2206 | hypothetical protein | - |
| J8F86_RS11250 (2329937) | 2329937..2330959 | + | 1023 | Protein_2208 | ISNCY family transposase ISCARN112 | Transposase |
| J8F86_RS11255 (2331080) | 2331080..2331229 | + | 150 | WP_011443592.1 | ISNCY family transposase ISCARN112 | Transposase |
| J8F86_RS11260 (2331666) | 2331666..2331998 | - | 333 | WP_001301033.1 | FlxA-like family protein | - |
| J8F86_RS11265 (2332201) | 2332201..2332506 | - | 306 | WP_001326990.1 | protein YdfV | - |
| J8F86_RS11270 (2332531) | 2332531..2332770 | + | 240 | WP_000534858.1 | type II toxin-antitoxin system antitoxin RelB | Antitoxin Detail |
| J8F86_RS11275 (2332770) | 2332770..2333057 | + | 288 | WP_047402633.1 | type II toxin-antitoxin system mRNA interferase RelE | Toxin Detail |
| J8F86_RS11280 (2333129) | 2333129..2333284 | + | 156 | WP_000813254.1 | type I toxin-antitoxin system toxin HokD | - |
| J8F86_RS11285 (2333501) | 2333501..2333752 | + | 252 | WP_000980994.1 | protein Rem | - |
| J8F86_RS11290 (2333819) | 2333819..2334097 | + | 279 | WP_012304870.1 | hypothetical protein | - |
| J8F86_RS11295 (2334099) | 2334099..2335148 | + | 1050 | WP_001265199.1 | DUF968 domain-containing protein | - |
| J8F86_RS11300 (2335162) | 2335162..2335914 | + | 753 | WP_001047135.1 | antitermination protein | - |
| J8F86_RS11305 (2336192) | 2336192..2336281 | - | 90 | WP_120795389.1 | hypothetical protein | - |
| J8F86_RS11310 (2336336) | 2336336..2336548 | - | 213 | WP_000087756.1 | cold shock-like protein CspF | - |
| J8F86_RS11315 (2336849) | 2336849..2337064 | + | 216 | WP_000066484.1 | cold shock-like protein CspB | - |
| J8F86_RS11320 (2337428) | 2337428..2337598 | - | 171 | WP_211180497.1 | putative zinc-binding protein YnfU | - |
| J8F86_RS11325 (2337818) | 2337818..2338033 | + | 216 | WP_000839590.1 | phage lysis protein EssD | - |
| J8F86_RS11330 (2338038) | 2338038..2338349 | + | 312 | WP_000189916.1 | YdfR family protein | - |
| J8F86_RS11335 (2338346) | 2338346..2338879 | + | 534 | WP_047402632.1 | lysozyme | - |
| J8F86_RS11340 (2338876) | 2338876..2339373 | + | 498 | WP_001071769.1 | DUF2514 domain-containing protein | - |
| J8F86_RS11345 (2339736) | 2339736..2339948 | + | 213 | WP_000066495.1 | cold shock protein CspI | - |
| J8F86_RS11350 (2339959) | 2339959..2340147 | + | 189 | WP_071524604.1 | cold-shock protein | - |
| J8F86_RS11355 (2340150) | 2340150..2340215 | + | 66 | WP_120795388.1 | small protein YnfR | - |
| J8F86_RS11360 (2340220) | 2340220..2340450 | + | 231 | WP_000720962.1 | protein YnfN | - |
| J8F86_RS11365 (2340622) | 2340622..2340795 | + | 174 | WP_001019606.1 | addiction module toxin, GnsA/GnsB family | - |
| J8F86_RS11370 (2340947) | 2340947..2341357 | - | 411 | WP_000373090.1 | DUF1398 domain-containing protein | - |
| J8F86_RS11375 (2341415) | 2341415..2341612 | - | 198 | WP_236941922.1 | YlcI/YnfO family protein | - |
| J8F86_RS11380 (2341587) | 2341587..2342549 | + | 963 | WP_081508886.1 | phage tail protein | - |
| J8F86_RS11385 (2342549) | 2342549..2343124 | + | 576 | WP_000885611.1 | tail fiber assembly protein | - |
| J8F86_RS11390 (2343222) | 2343222..2343812 | - | 591 | WP_000078177.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| J8F86_RS11395 (2344129) | 2344129..2344362 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| J8F86_RS11400 (2344431) | 2344431..2344544 | - | 114 | WP_120795384.1 | YnaM/YnfT family protein | - |
| J8F86_RS11405 (2345065) | 2345065..2346432 | + | 1368 | Protein_2239 | MHS family MFS transporter | - |
| J8F86_RS11410 (2346521) | 2346521..2347981 | + | 1461 | WP_000527809.1 | mannitol dehydrogenase family protein | - |
| J8F86_RS11415 (2348016) | 2348016..2348219 | - | 204 | WP_000214712.1 | putative selenium delivery protein YdfZ | - |
| J8F86_RS11420 (2348396) | 2348396..2349082 | - | 687 | WP_000215549.1 | DNA-binding transcriptional regulator rspR | - |
| J8F86_RS11425 (2349171) | 2349171..2349917 | - | 747 | WP_000636571.1 | NADP-dependent 3-hydroxy acid dehydrogenase YdfG | VF |
| J8F86_RS11430 (2350054) | 2350054..2352099 | + | 2046 | WP_000210373.1 | peptidyl-dipeptidase Dcp | - |
| J8F86_RS11435 (2352143) | 2352143..2352661 | - | 519 | WP_001024746.1 | 2-oxo-tetronate isomerase | - |
| J8F86_RS11440 (2352972) | 2352972..2354092 | + | 1121 | WP_085950818.1 | IS3 family transposase ISSen4 | Transposase |
| J8F86_RS11445 (2354162) | 2354162..2354554 | + | 393 | WP_000671737.1 | YdeI family stress tolerance OB fold protein | - |
| J8F86_RS11450 (2354809) | 2354809..2355699 | + | 891 | WP_000592814.1 | diguanylate cyclase DgcZ | - |
| J8F86_RS11455 (2355814) | 2355814..2355918 | - | 105 | WP_211180496.1 | protein MgtT | - |
| J8F86_RS11460 (2355918) | 2355918..2356013 | - | 96 | WP_000901367.1 | protein MgtS | - |
| J8F86_RS11465 (2356140) | 2356140..2357327 | - | 1188 | Protein_2251 | efflux MFS transporter YdeE | - |
| J8F86_RS11470 (2357522) | 2357522..2358421 | + | 900 | WP_000087214.1 | O-acetylserine/cysteine exporter | - |
| J8F86_RS11475 (2358452) | 2358452..2358670 | - | 219 | WP_000803657.1 | multiple antibiotic resistance protein MarB | - |
| J8F86_RS11480 (2358702) | 2358702..2359085 | - | 384 | WP_000091199.1 | MDR efflux pump AcrAB transcriptional activator MarA | - |
| J8F86_RS11485 (2359105) | 2359105..2359539 | - | 435 | WP_000843414.1 | multiple antibiotic resistance transcriptional regulator MarR | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|