MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 139696 bp
Accession: NZ_CP072309 Location: 671019..810714 Organism: Agrobacterium tumefaciens strain 6N2 Replicon: chromosome
Accession: NZ_CP072309 Location: 671019..810714 Organism: Agrobacterium tumefaciens strain 6N2 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AT6N2_RS17205 (AT6N2_L0737) | 668502..669251 | - | 750 | WP_209090381.1 | glucose 1-dehydrogenase | - |
| AT6N2_RS17210 (AT6N2_L0738) | 669343..669684 | + | 342 | WP_063947468.1 | helix-turn-helix domain-containing protein | - |
| AT6N2_RS17215 (AT6N2_L0739) | 670114..670608 | - | 495 | WP_077224591.1 | 2'-5' RNA ligase family protein | - |
| AT6N2_RS17220 (AT6N2_L0740) | 670913..671884 | - | 972 | WP_209090383.1 | alpha/beta hydrolase | - |
| AT6N2_RS17225 (AT6N2_L0742) | 672068..672958 | - | 891 | WP_063947472.1 | LysR family transcriptional regulator | - |
| AT6N2_RS17230 (AT6N2_L0744) | 673031..673336 | - | 306 | WP_063947474.1 | hypothetical protein | - |
| AT6N2_RS17235 (AT6N2_L0745) | 673362..673826 | - | 465 | WP_063947477.1 | DUF1348 family protein | - |
| AT6N2_RS17240 (AT6N2_L0746) | 673898..674446 | - | 549 | WP_209090385.1 | peroxidase-related enzyme | - |
| AT6N2_RS17245 (AT6N2_L0748) | 674571..676628 | - | 2058 | WP_209090387.1 | pyridoxamine 5'-phosphate oxidase family protein | - |
| AT6N2_RS17250 (AT6N2_L0749) | 676689..677300 | - | 612 | WP_063947482.1 | glutathione S-transferase | - |
| AT6N2_RS17255 (AT6N2_L0751) | 677501..678421 | - | 921 | WP_209091880.1 | LysR family transcriptional regulator | - |
| AT6N2_RS17260 (AT6N2_L0752) | 678520..679935 | + | 1416 | WP_209090389.1 | aldehyde dehydrogenase family protein | - |
| AT6N2_RS17265 (AT6N2_L0753) | 680049..680579 | - | 531 | WP_233282519.1 | SDR family oxidoreductase | - |
| AT6N2_RS17270 (AT6N2_L0754) | 680643..681116 | + | 474 | WP_233282520.1 | Rrf2 family transcriptional regulator | - |
| AT6N2_RS17280 (AT6N2_L0755) | 681584..683659 | + | 2076 | WP_209090393.1 | TonB-dependent receptor | - |
| AT6N2_RS17285 (AT6N2_L0756) | 683659..684849 | + | 1191 | WP_209090394.1 | MFS transporter | - |
| AT6N2_RS17290 (AT6N2_L0757) | 684846..685514 | + | 669 | WP_063947493.1 | class I SAM-dependent methyltransferase | - |
| AT6N2_RS17295 (AT6N2_L0758) | 685549..686085 | + | 537 | WP_063947495.1 | TetR family transcriptional regulator | - |
| AT6N2_RS17300 (AT6N2_L0761) | 686698..687843 | + | 1146 | WP_209090396.1 | DSD1 family PLP-dependent enzyme | - |
| AT6N2_RS17305 (AT6N2_L0762) | 687855..688811 | + | 957 | WP_063947499.1 | ornithine cyclodeaminase family protein | - |
| AT6N2_RS17310 (AT6N2_L0764) | 688808..690265 | + | 1458 | WP_063947501.1 | aldehyde dehydrogenase family protein | - |
| AT6N2_RS17315 (AT6N2_L0765) | 690345..691829 | - | 1485 | WP_209090397.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| AT6N2_RS17320 | 691826..692134 | - | 309 | WP_063947505.1 | (2Fe-2S)-binding protein | - |
| AT6N2_RS17325 (AT6N2_L0766) | 692115..693230 | - | 1116 | WP_209090398.1 | FAD-dependent oxidoreductase | - |
| AT6N2_RS17330 (AT6N2_L0767) | 693349..694236 | - | 888 | WP_273545425.1 | LysR family transcriptional regulator | - |
| AT6N2_RS17335 (AT6N2_L0769) | 694593..696107 | + | 1515 | WP_209090399.1 | ABC transporter substrate-binding protein | - |
| AT6N2_RS17340 (AT6N2_L0770) | 696203..697171 | - | 969 | WP_209091884.1 | LysR family transcriptional regulator | - |
| AT6N2_RS17345 (AT6N2_L0771) | 697478..698806 | + | 1329 | WP_063947511.1 | FAD-binding oxidoreductase | - |
| AT6N2_RS17350 (AT6N2_L0772) | 698919..699917 | - | 999 | WP_063947513.1 | 4-hydroxyproline epimerase | - |
| AT6N2_RS17355 (AT6N2_L0774) | 699927..700280 | - | 354 | Protein_622 | ABC transporter permease subunit | - |
| AT6N2_RS17360 (AT6N2_L0775) | 700277..701611 | + | 1335 | Protein_623 | (Fe-S)-binding protein | - |
| AT6N2_RS17365 | 701658..702164 | + | 507 | Protein_624 | DDE-type integrase/transposase/recombinase | - |
| AT6N2_RS17370 | 702334..702522 | + | 189 | Protein_625 | transposase | - |
| AT6N2_RS17375 (AT6N2_L0779) | 702739..703185 | + | 447 | WP_209090401.1 | hypothetical protein | - |
| AT6N2_RS17380 (AT6N2_L0780) | 703182..703817 | + | 636 | WP_209090402.1 | OmpA family protein | - |
| AT6N2_RS17385 (AT6N2_L0781) | 703819..704049 | + | 231 | WP_209090404.1 | hypothetical protein | - |
| AT6N2_RS17390 (AT6N2_L0782) | 704202..704735 | - | 534 | WP_209090405.1 | lipocalin family protein | - |
| AT6N2_RS17395 (AT6N2_L0783) | 705190..706134 | - | 945 | WP_209090407.1 | dienelactone hydrolase | - |
| AT6N2_RS17400 (AT6N2_L0784) | 706173..706931 | - | 759 | WP_209090409.1 | SDR family oxidoreductase | - |
| AT6N2_RS17405 (AT6N2_L0785) | 707030..707929 | + | 900 | WP_209090410.1 | AraC family transcriptional regulator | - |
| AT6N2_RS24185 | 707868..708413 | - | 546 | Protein_633 | LysR substrate-binding domain-containing protein | - |
| AT6N2_RS17410 (AT6N2_L0786) | 708595..708903 | - | 309 | WP_063947527.1 | hypothetical protein | - |
| AT6N2_RS17415 (AT6N2_L0787) | 709056..710153 | + | 1098 | WP_209090411.1 | DNA polymerase IV | - |
| AT6N2_RS17420 (AT6N2_L0788) | 710349..710939 | + | 591 | WP_233282522.1 | DNA polymerase III subunit epsilon | - |
| AT6N2_RS24190 | 710944..711185 | + | 242 | Protein_637 | hydrolase | - |
| AT6N2_RS17425 (AT6N2_L0791) | 711484..712281 | - | 798 | WP_233282523.1 | IS3 family transposase | - |
| AT6N2_RS17430 (AT6N2_L0792) | 712278..712640 | - | 363 | WP_209090412.1 | transposase | - |
| AT6N2_RS17435 (AT6N2_L0793) | 712818..713816 | + | 999 | WP_209090413.1 | LacI family DNA-binding transcriptional regulator | - |
| AT6N2_RS17440 | 713860..714480 | + | 621 | Protein_641 | extracellular solute-binding protein | - |
| AT6N2_RS17445 (AT6N2_L0794) | 714565..716514 | - | 1950 | WP_209090414.1 | MacB family efflux pump subunit | - |
| AT6N2_RS17450 (AT6N2_L0795) | 716523..717716 | - | 1194 | WP_209090415.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AT6N2_RS17455 (AT6N2_L0796) | 717964..719313 | - | 1350 | WP_209090416.1 | HAMP domain-containing sensor histidine kinase | - |
| AT6N2_RS17460 (AT6N2_L0797) | 719315..719989 | - | 675 | WP_209090418.1 | response regulator transcription factor | - |
| AT6N2_RS17465 (AT6N2_L0798) | 720194..720478 | - | 285 | WP_209090420.1 | YMGG-like glycine zipper-containing protein | - |
| AT6N2_RS17470 (AT6N2_L0800) | 720828..721679 | - | 852 | WP_209090422.1 | 2-hydroxy-3-oxopropionate reductase | - |
| AT6N2_RS17475 (AT6N2_L0802) | 721683..722468 | - | 786 | WP_209090424.1 | hydroxypyruvate isomerase | - |
| AT6N2_RS17480 (AT6N2_L0803) | 722480..724192 | - | 1713 | WP_209090426.1 | ABC transporter ATP-binding protein | - |
| AT6N2_RS17485 (AT6N2_L0804) | 724204..725379 | - | 1176 | WP_209090428.1 | ABC transporter permease | - |
| AT6N2_RS17490 (AT6N2_L0805) | 725390..726376 | - | 987 | WP_173616190.1 | ABC transporter permease | - |
| AT6N2_RS17495 (AT6N2_L0806) | 726405..728519 | - | 2115 | WP_209090430.1 | family 10 glycosylhydrolase | - |
| AT6N2_RS17500 (AT6N2_L0807) | 728624..730552 | - | 1929 | WP_209090432.1 | ABC transporter substrate-binding protein | - |
| AT6N2_RS17505 (AT6N2_L0808) | 730752..731765 | + | 1014 | WP_209090434.1 | LacI family DNA-binding transcriptional regulator | - |
| AT6N2_RS24195 (AT6N2_L0809) | 731911..732210 | + | 300 | WP_082055481.1 | hypothetical protein | - |
| AT6N2_RS17510 (AT6N2_L0810) | 732210..732641 | + | 432 | WP_209090436.1 | type II toxin-antitoxin system VapC family toxin | - |
| AT6N2_RS17515 (AT6N2_L0811) | 732787..733233 | + | 447 | WP_080830429.1 | excisionase | - |
| AT6N2_RS17520 (AT6N2_L0812) | 733223..733801 | + | 579 | WP_209090438.1 | PIN domain-containing protein | - |
| AT6N2_RS24200 (AT6N2_L0813) | 733951..735093 | + | 1143 | Protein_659 | hypothetical protein | - |
| AT6N2_RS17530 (AT6N2_L0815) | 735275..736429 | + | 1155 | WP_209090440.1 | site-specific integrase | - |
| AT6N2_RS17535 (AT6N2_L0816) | 736426..737640 | - | 1215 | WP_209090442.1 | arsenite efflux MFS transporter ArsK | - |
| AT6N2_RS17540 (AT6N2_L0817) | 737637..738362 | - | 726 | WP_209090444.1 | arsenical resistance protein ArsH | - |
| AT6N2_RS17545 (AT6N2_L0818) | 738337..738759 | - | 423 | WP_209090446.1 | arsenate reductase (glutaredoxin) | - |
| AT6N2_RS17550 (AT6N2_L0820) | 738763..739797 | - | 1035 | WP_209090448.1 | ACR3 family arsenite efflux transporter | - |
| AT6N2_RS17555 | 739801..740241 | - | 441 | WP_209090450.1 | arsenic resistance N-acetyltransferase ArsN2 | - |
| AT6N2_RS17560 (AT6N2_L0822) | 740238..740588 | - | 351 | WP_209090452.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| AT6N2_RS17565 | 740630..741151 | + | 522 | WP_209090454.1 | DUF6428 family protein | - |
| AT6N2_RS17570 (AT6N2_L0823) | 741296..742445 | + | 1150 | Protein_668 | site-specific integrase | - |
| AT6N2_RS17575 (AT6N2_L0827) | 742545..743843 | - | 1299 | WP_209090456.1 | MFS transporter | - |
| AT6N2_RS17580 (AT6N2_L0828) | 744104..744769 | + | 666 | WP_209091886.1 | response regulator | - |
| AT6N2_RS17585 (AT6N2_L0829) | 744770..746206 | + | 1437 | WP_209090457.1 | ATP-binding protein | - |
| AT6N2_RS17590 (AT6N2_L0832) | 748029..749465 | + | 1437 | WP_233282524.1 | TolC family outer membrane protein | - |
| AT6N2_RS24205 | 750055..750186 | + | 132 | Protein_673 | hypothetical protein | - |
| AT6N2_RS24210 | 750389..752077 | + | 1689 | WP_233282604.1 | hypothetical protein | - |
| AT6N2_RS17600 | 752095..753912 | + | 1818 | WP_209091994.1 | VCBS domain-containing protein | - |
| AT6N2_RS17605 (AT6N2_L0835) | 753970..756222 | + | 2253 | WP_209090458.1 | type I secretion system permease/ATPase | - |
| AT6N2_RS17610 (AT6N2_L0836) | 756223..757425 | + | 1203 | WP_209090459.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| AT6N2_RS17615 (AT6N2_L0837) | 757415..760009 | + | 2595 | WP_233282525.1 | Mur ligase family protein | - |
| AT6N2_RS24215 | 760006..760584 | + | 579 | WP_233282526.1 | cyanophycin synthetase | - |
| AT6N2_RS17620 (AT6N2_L0839) | 760610..761656 | - | 1047 | WP_209090460.1 | alpha/beta hydrolase | - |
| AT6N2_RS24220 | 762062..762236 | + | 175 | Protein_681 | anti-sigma factor | - |
| AT6N2_RS17625 | 762424..762642 | - | 219 | Protein_682 | replication initiation protein RepC | - |
| AT6N2_RS17630 (AT6N2_L0840) | 762651..763106 | + | 456 | WP_209090461.1 | acyl-homoserine-lactone synthase | - |
| AT6N2_RS17635 (AT6N2_L0841) | 763103..763813 | + | 711 | WP_209090462.1 | autoinducer binding domain-containing protein | - |
| AT6N2_RS17640 (AT6N2_L0843) | 764227..765325 | + | 1099 | Protein_685 | IS3 family transposase | - |
| AT6N2_RS17645 (AT6N2_L0848) | 765436..766349 | - | 914 | Protein_686 | nucleotidyltransferase and HEPN domain-containing protein | - |
| AT6N2_RS17650 (AT6N2_L0850) | 766595..767515 | + | 921 | WP_209090464.1 | LysR family transcriptional regulator | - |
| AT6N2_RS17655 (AT6N2_L0851) | 767965..768312 | + | 348 | WP_209090466.1 | hypothetical protein | - |
| AT6N2_RS17660 | 768510..773144 | - | 4635 | Protein_689 | Ti-type conjugative transfer relaxase TraA | - |
| AT6N2_RS17665 (AT6N2_L0856) | 773366..773602 | + | 237 | WP_209090467.1 | TraC family protein | - |
| AT6N2_RS17670 (AT6N2_L0857) | 773643..773882 | + | 240 | WP_209090468.1 | conjugal transfer protein TraD | - |
| AT6N2_RS17675 (AT6N2_L0858) | 773873..775792 | + | 1920 | WP_209090469.1 | Ti-type conjugative transfer system protein TraG | - |
| AT6N2_RS17680 (AT6N2_L0859) | 775833..776129 | + | 297 | WP_209090470.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| AT6N2_RS17685 | 776598..776852 | + | 255 | WP_209090471.1 | WGR domain-containing protein | - |
| AT6N2_RS17690 (AT6N2_L0862) | 776982..777260 | + | 279 | WP_209090472.1 | HU family DNA-binding protein | - |
| AT6N2_RS17695 (AT6N2_L0863) | 777604..777864 | + | 261 | WP_209090473.1 | antitoxin | Antitoxin Detail |
| AT6N2_RS17700 (AT6N2_L0864) | 777861..778268 | + | 408 | WP_209090475.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AT6N2_RS17705 (AT6N2_L0866) | 778626..779639 | - | 1014 | WP_209090477.1 | P-type DNA transfer ATPase VirB11 | - |
| AT6N2_RS17710 (AT6N2_L0867) | 779648..780820 | - | 1173 | WP_209090479.1 | type IV secretion system protein VirB10 | - |
| AT6N2_RS17715 (AT6N2_L0868) | 780829..781686 | - | 858 | WP_209090481.1 | P-type conjugative transfer protein VirB9 | - |
| AT6N2_RS17720 (AT6N2_L0869) | 781683..782354 | - | 672 | WP_209090482.1 | virB8 family protein | - |
| AT6N2_RS17725 (AT6N2_L0870) | 782356..782637 | - | 282 | WP_209090483.1 | hypothetical protein | - |
| AT6N2_RS17730 (AT6N2_L0872) | 782677..783609 | - | 933 | WP_209090484.1 | type IV secretion system protein | - |
| AT6N2_RS17735 (AT6N2_L0873) | 783613..783846 | - | 234 | WP_209090485.1 | EexN family lipoprotein | - |
| AT6N2_RS17740 (AT6N2_L0874) | 783843..784544 | - | 702 | WP_209090486.1 | P-type DNA transfer protein VirB5 | - |
| AT6N2_RS17745 (AT6N2_L0875) | 784541..786907 | - | 2367 | WP_209090487.1 | VirB4 family type IV secretion system protein | - |
| AT6N2_RS17750 (AT6N2_L0876) | 786900..787238 | - | 339 | WP_209090489.1 | type IV secretion system protein VirB3 | - |
| AT6N2_RS17755 (AT6N2_L0877) | 787244..787543 | - | 300 | WP_209090490.1 | TrbC/VirB2 family protein | - |
| AT6N2_RS17760 (AT6N2_L0880) | 787544..788212 | - | 669 | WP_209090491.1 | lytic transglycosylase domain-containing protein | - |
| AT6N2_RS24225 | 788217..788738 | - | 522 | WP_233282527.1 | hypothetical protein | - |
| AT6N2_RS17765 (AT6N2_L0881) | 788838..789188 | + | 351 | WP_209090492.1 | MarR family transcriptional regulator | - |
| AT6N2_RS17770 (AT6N2_L0882) | 789572..789880 | - | 309 | WP_209090493.1 | DUF736 domain-containing protein | - |
| AT6N2_RS17775 | 790340..790513 | + | 174 | WP_209090494.1 | hypothetical protein | - |
| AT6N2_RS17780 (AT6N2_L0883) | 790517..791440 | - | 924 | WP_209090495.1 | zincin-like metallopeptidase domain-containing protein | - |
| AT6N2_RS17785 (AT6N2_L0884) | 791713..792300 | - | 588 | WP_209091888.1 | hypothetical protein | - |
| AT6N2_RS17790 (AT6N2_L0886) | 792685..792996 | - | 312 | WP_209090496.1 | hypothetical protein | - |
| AT6N2_RS17795 (AT6N2_L0888) | 793262..794050 | - | 789 | WP_209090498.1 | acyl-homoserine-lactone synthase | - |
| AT6N2_RS17800 (AT6N2_L0889) | 794125..794865 | - | 741 | WP_209090500.1 | LuxR family transcriptional regulator | - |
| AT6N2_RS17805 (AT6N2_L0890) | 795163..796536 | - | 1374 | WP_209090501.1 | ISNCY family transposase | - |
| AT6N2_RS17810 (AT6N2_L0891) | 796900..797328 | - | 429 | WP_209090502.1 | VOC family protein | - |
| AT6N2_RS17815 (AT6N2_L0892) | 797917..798696 | - | 780 | WP_209090503.1 | glutaredoxin domain-containing protein | - |
| AT6N2_RS17820 (AT6N2_L0893) | 798772..799155 | + | 384 | WP_209090504.1 | MerR family DNA-binding protein | - |
| AT6N2_RS17825 (AT6N2_L0894) | 799476..800483 | - | 1008 | WP_209090505.1 | succinylglutamate desuccinylase/aspartoacylase family protein | - |
| AT6N2_RS17830 (AT6N2_L0895) | 800514..801260 | - | 747 | WP_209090506.1 | amino acid ABC transporter ATP-binding protein | - |
| AT6N2_RS17835 (AT6N2_L0896) | 801267..801926 | - | 660 | WP_209090507.1 | ectoine/hydroxyectoine ABC transporter permease subunit EhuD | - |
| AT6N2_RS17840 (AT6N2_L0897) | 801916..802575 | - | 660 | WP_209090509.1 | amino acid ABC transporter permease | - |
| AT6N2_RS17845 (AT6N2_L0898) | 802607..803482 | - | 876 | WP_209090511.1 | ectoine/hydroxyectoine ABC transporter substrate-binding protein EhuB | - |
| AT6N2_RS17850 (AT6N2_L0899) | 803522..804718 | - | 1197 | WP_209090512.1 | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | - |
| AT6N2_RS17855 (AT6N2_L0900) | 804849..805742 | + | 894 | WP_233282528.1 | LysR substrate-binding domain-containing protein | - |
| AT6N2_RS17860 (AT6N2_L0901) | 805804..806706 | - | 903 | WP_209090513.1 | LysR family transcriptional regulator | - |
| AT6N2_RS17865 (AT6N2_L0902) | 806912..807736 | + | 825 | WP_209090514.1 | aldo/keto reductase | - |
| AT6N2_RS17870 (AT6N2_L0903) | 807799..808671 | + | 873 | WP_209090515.1 | cyclase family protein | - |
| AT6N2_RS17875 (AT6N2_L0904) | 808693..809472 | + | 780 | WP_209090516.1 | SDR family oxidoreductase | - |
| AT6N2_RS24230 | 809529..809810 | - | 282 | WP_233282529.1 | potassium-tellurite ethidium and proflavin transporter | - |
| AT6N2_RS17880 (AT6N2_L0906) | 809814..810524 | - | 711 | WP_233282530.1 | hypothetical protein | - |
| AT6N2_RS17885 (AT6N2_L0907) | 810593..811555 | - | 963 | Protein_736 | alpha/beta hydrolase | - |
| AT6N2_RS17890 (AT6N2_L0912) | 811981..812316 | + | 336 | WP_112153343.1 | nitrile hydratase subunit beta | - |
| AT6N2_RS17895 (AT6N2_L0913) | 812318..813007 | + | 690 | WP_209090517.1 | nitrile hydratase subunit alpha | - |
| AT6N2_RS17900 (AT6N2_L0915) | 813004..813348 | + | 345 | WP_209090518.1 | nitrile hydratase subunit beta | - |
| AT6N2_RS17905 | 813341..814051 | + | 711 | WP_209091890.1 | aquaporin | - |
| AT6N2_RS17910 | 814094..814279 | + | 186 | WP_209090520.1 | CbtB-domain containing protein | - |
| AT6N2_RS17915 (AT6N2_L0917) | 814291..814983 | + | 693 | WP_209090522.1 | CbtA family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|