MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 95290 bp
Accession: NZ_CP072161 Location: 1..95290 Organism: Rhizobium sp. B230/85 Replicon: plasmid unnamed3
Accession: NZ_CP072161 Location: 1..95290 Organism: Rhizobium sp. B230/85 Replicon: plasmid unnamed3
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J5289_RS28735 (J5289_28715) | 1155..2891 | - | 1737 | Protein_1 | methyl-accepting chemotaxis protein | - |
| J5289_RS28740 (J5289_28720) | 3774..3929 | + | 156 | Protein_2 | DUF4158 domain-containing protein | - |
| J5289_RS28745 (J5289_28725) | 3983..4141 | - | 159 | WP_257625553.1 | RES family NAD+ phosphorylase | - |
| J5289_RS28750 (J5289_28730) | 4379..4672 | - | 294 | WP_209207572.1 | DUF982 domain-containing protein | - |
| J5289_RS28755 (J5289_28735) | 5091..5834 | - | 744 | WP_209207573.1 | CbtA family protein | - |
| J5289_RS28760 (J5289_28740) | 5847..6056 | - | 210 | WP_209207574.1 | CbtB-domain containing protein | - |
| J5289_RS28765 (J5289_28745) | 6456..6848 | + | 393 | WP_247750766.1 | histidine phosphatase family protein | - |
| J5289_RS28770 (J5289_28750) | 6919..7152 | - | 234 | WP_209207576.1 | hypothetical protein | - |
| J5289_RS28775 (J5289_28755) | 7302..7454 | - | 153 | Protein_9 | Lrp/AsnC ligand binding domain-containing protein | - |
| J5289_RS28780 (J5289_28760) | 7783..9162 | + | 1380 | WP_209207577.1 | L-ornithine N(5)-monooxygenase | VF |
| J5289_RS28785 (J5289_28765) | 9162..9407 | + | 246 | WP_209207578.1 | Protein MbtH | VF |
| J5289_RS28790 (J5289_28770) | 9422..10831 | + | 1410 | WP_209207579.1 | Salicylate synthase | VF |
| J5289_RS28795 (J5289_28775) | 10828..11694 | + | 867 | WP_209207580.1 | alpha/beta hydrolase | - |
| J5289_RS28800 (J5289_28780) | 11687..13336 | + | 1650 | WP_209207581.1 | 2,3-dihydroxybenzoate-AMP ligase | VF |
| J5289_RS28805 (J5289_28785) | 13538..14653 | + | 1116 | WP_209207582.1 | Isochorismate synthase EntC | VF |
| J5289_RS28810 (J5289_28790) | 14985..16574 | + | 1590 | WP_209207583.1 | Dimodular nonribosomal peptide synthase | VF |
| J5289_RS28815 (J5289_28795) | 16596..19082 | + | 2487 | WP_209207584.1 | Phenyloxazoline synthase MbtB | VF |
| J5289_RS28820 (J5289_28800) | 19079..20446 | + | 1368 | WP_209207585.1 | condensation domain-containing protein | - |
| J5289_RS28825 (J5289_28805) | 20452..24654 | + | 4203 | WP_209207586.1 | Linear gramicidin synthase subunit B | VF |
| J5289_RS28830 (J5289_28810) | 24647..26131 | + | 1485 | WP_209207587.1 | hypothetical protein | - |
| J5289_RS28835 (J5289_28815) | 26271..33434 | + | 7164 | WP_209207588.1 | Linear gramicidin synthase subunit D | VF |
| J5289_RS28840 (J5289_28820) | 33431..34261 | - | 831 | WP_209207589.1 | 4'-phosphopantetheinyl transferase superfamily protein | - |
| J5289_RS28845 (J5289_28825) | 34304..34954 | - | 651 | WP_111221317.1 | TetR/AcrR family transcriptional regulator | - |
| J5289_RS28850 (J5289_28830) | 35070..37265 | + | 2196 | WP_209207590.1 | TonB-dependent siderophore receptor | - |
| J5289_RS28855 (J5289_28835) | 37272..38396 | + | 1125 | WP_209207591.1 | ABC transporter substrate-binding protein | - |
| J5289_RS28860 (J5289_28840) | 38401..39537 | + | 1137 | WP_247750767.1 | siderophore-interacting protein | - |
| J5289_RS28865 (J5289_28845) | 40154..41236 | + | 1083 | Protein_27 | IS630 family transposase ISRfr1 | Transposase |
| J5289_RS28870 (J5289_28850) | 41776..42108 | + | 333 | WP_142831984.1 | AcvB/VirJ family lysyl-phosphatidylglycerol hydrolase | - |
| J5289_RS28875 (J5289_28855) | 42397..42867 | + | 471 | WP_209207592.1 | hypothetical protein | - |
| J5289_RS28880 (J5289_28860) | 42890..43969 | - | 1080 | WP_209207593.1 | IS630 family transposase IS870 | Transposase |
| J5289_RS28885 (J5289_28865) | 45111..46883 | - | 1773 | WP_209207594.1 | SWIM zinc finger family protein | - |
| J5289_RS28890 (J5289_28870) | 47037..47387 | - | 351 | WP_209207620.1 | hypothetical protein | - |
| J5289_RS29680 | 47472..47732 | + | 261 | WP_142831991.1 | hypothetical protein | - |
| J5289_RS28895 (J5289_28875) | 48098..48633 | + | 536 | Protein_34 | Tn3 family transposase | - |
| J5289_RS28900 (J5289_28880) | 48735..49300 | - | 566 | Protein_35 | cation transporter | - |
| J5289_RS28905 (J5289_28885) | 49581..49874 | - | 294 | WP_209207595.1 | hypothetical protein | - |
| J5289_RS28910 (J5289_28890) | 50496..51713 | + | 1218 | WP_209207596.1 | Sporulation initiation inhibitor protein Soj | VF |
| J5289_RS28915 (J5289_28895) | 51710..52708 | + | 999 | WP_209207597.1 | plasmid partitioning protein RepB | - |
| J5289_RS28920 (J5289_28900) | 52906..54228 | + | 1323 | WP_209207598.1 | plasmid replication protein RepC | - |
| J5289_RS28925 (J5289_28905) | 54341..55258 | - | 918 | WP_247750776.1 | HEPN domain-containing protein | - |
| J5289_RS28930 (J5289_28910) | 55682..56059 | + | 378 | WP_209207616.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| J5289_RS28935 (J5289_28915) | 56040..56375 | + | 336 | WP_209207600.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| J5289_RS28940 (J5289_28920) | 56615..56926 | + | 312 | WP_219276702.1 | cold shock domain-containing protein | - |
| J5289_RS28945 (J5289_28925) | 57134..58165 | - | 1032 | WP_209207617.1 | IS630 family transposase IS1471 | Transposase |
| J5289_RS28950 (J5289_28930) | 58769..58921 | - | 153 | WP_209207602.1 | hypothetical protein | - |
| J5289_RS28955 (J5289_28935) | 58921..59604 | - | 684 | WP_209207603.1 | hypothetical protein | - |
| J5289_RS28960 (J5289_28940) | 59750..59992 | + | 243 | WP_209207618.1 | helix-turn-helix transcriptional regulator | - |
| J5289_RS28965 (J5289_28945) | 60125..60484 | - | 360 | WP_247750768.1 | hypothetical protein | - |
| J5289_RS28970 (J5289_28950) | 60481..62145 | - | 1665 | WP_209207604.1 | type IV secretory system conjugative DNA transfer family protein | - |
| J5289_RS28975 (J5289_28955) | 62142..62447 | - | 306 | WP_209207605.1 | mobilization protein | - |
| J5289_RS28980 (J5289_28960) | 63208..63642 | - | 435 | WP_209207606.1 | type II toxin-antitoxin system VapC family toxin | - |
| J5289_RS28985 (J5289_28965) | 63642..63881 | - | 240 | WP_209207607.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| J5289_RS28990 (J5289_28970) | 64126..64428 | - | 303 | WP_209207608.1 | mobilization protein | - |
| J5289_RS28995 (J5289_28975) | 64464..64910 | - | 447 | WP_209207609.1 | GNAT family N-acetyltransferase | - |
| J5289_RS29000 (J5289_28980) | 65327..69016 | + | 3690 | WP_219276703.1 | ATP-dependent RecD-like DNA helicase | Relaxase |
| J5289_RS29005 (J5289_28985) | 69025..69768 | + | 744 | WP_219276705.1 | DUF6118 family protein | - |
| J5289_RS29010 (J5289_28990) | 69808..70095 | + | 288 | WP_219276707.1 | integration host factor subunit beta | - |
| J5289_RS29015 (J5289_28995) | 70250..70510 | - | 261 | WP_209207939.1 | hypothetical protein | - |
| J5289_RS29020 (J5289_29000) | 71023..72102 | - | 1080 | WP_219276603.1 | IS630 family transposase ISRfr1 | Transposase |
| J5289_RS29025 (J5289_29005) | 72152..72856 | - | 705 | WP_209207557.1 | autoinducer binding domain-containing protein | - |
| J5289_RS29030 (J5289_29010) | 73127..73324 | - | 198 | WP_247750761.1 | hypothetical protein | - |
| J5289_RS29035 (J5289_29015) | 73633..74271 | - | 639 | WP_209207558.1 | HNH endonuclease | - |
| J5289_RS29040 (J5289_29020) | 74268..75764 | - | 1497 | WP_209207559.1 | ATP-binding protein | - |
| J5289_RS29045 (J5289_29025) | 76225..76635 | + | 411 | WP_209207560.1 | DNA mismatch endonuclease Vsr | - |
| J5289_RS29050 (J5289_29030) | 76722..78110 | + | 1389 | WP_247750762.1 | DNA cytosine methyltransferase | - |
| J5289_RS29055 (J5289_29035) | 78174..79658 | + | 1485 | WP_209207562.1 | ATP-binding protein | - |
| J5289_RS29685 | 79828..80109 | - | 282 | WP_247750763.1 | hypothetical protein | - |
| J5289_RS29060 (J5289_29040) | 80203..82407 | + | 2205 | WP_247750764.1 | Z1 domain-containing protein | - |
| J5289_RS29065 (J5289_29045) | 82404..83387 | + | 984 | WP_209207564.1 | PD-(D/E)XK motif protein | - |
| J5289_RS29070 (J5289_29050) | 83384..85486 | + | 2103 | WP_209207565.1 | ISNCY family transposase ISPa4 | Transposase |
| J5289_RS29075 (J5289_29055) | 85521..86318 | + | 798 | WP_209207566.1 | hypothetical protein | - |
| J5289_RS29080 (J5289_29060) | 86318..89026 | + | 2709 | WP_209207567.1 | hypothetical protein | - |
| J5289_RS29085 (J5289_29065) | 89160..90290 | - | 1131 | WP_209207611.1 | RHE_PE00001 family protein | - |
| J5289_RS29090 (J5289_29070) | 90471..90710 | + | 240 | WP_209207568.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| J5289_RS29095 (J5289_29075) | 90712..91128 | + | 417 | WP_209207612.1 | type II toxin-antitoxin system VapC family toxin | - |
| J5289_RS29100 (J5289_29080) | 91118..92264 | + | 1147 | Protein_76 | tyrosine-type recombinase/integrase | - |
| J5289_RS29105 (J5289_29085) | 92413..92982 | - | 570 | WP_209207569.1 | DNA-binding protein | - |
| J5289_RS29690 | 92984..93334 | - | 351 | WP_224129495.1 | hypothetical protein | - |
| J5289_RS29695 | 93480..93605 | - | 126 | WP_257625552.1 | hypothetical protein | - |
| J5289_RS29115 (J5289_29095) | 93622..93897 | + | 276 | WP_209207570.1 | NUDIX domain-containing protein | - |
| J5289_RS29120 (J5289_29100) | 94023..94678 | - | 656 | Protein_81 | HAD hydrolase-like protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|