MGE detailed information
MGE type: Genomic_island MGE length: 11601 bp
Accession: NZ_CP072054 Location: 1469371..1480971 Organism: Escherichia coli strain K1508 Replicon: chromosome
Accession: NZ_CP072054 Location: 1469371..1480971 Organism: Escherichia coli strain K1508 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J5N95_RS07095 (1466186) | 1466186..1467871 | - | 1686 | WP_000628576.1 | ABC transporter ATP-binding protein/permease | - |
| J5N95_RS07100 (1468074) | 1468074..1468196 | + | 123 | WP_120795387.1 | protein YneP | - |
| J5N95_RS07105 (1468162) | 1468162..1469319 | - | 1158 | WP_001301030.1 | anaerobic sulfatase maturase | - |
| J5N95_RS07110 (1469371) | 1469371..1471053 | - | 1683 | WP_001295684.1 | sulfatase | - |
| J5N95_RS07115 (1471455) | 1471455..1472216 | - | 762 | WP_000060495.1 | acid stress response transcriptional regulator YdeO | - |
| J5N95_RS07120 (1472291) | 1472291..1472488 | - | 198 | WP_000543384.1 | two-component system connector SafA | - |
| J5N95_RS07125 (1472736) | 1472736..1475015 | - | 2280 | WP_000726691.1 | acid resistance putative oxidoreductase YdeP | - |
| J5N95_RS07130 (1475349) | 1475349..1476263 | - | 915 | WP_000520676.1 | Type 1 fimbrin D-mannose specific adhesin | VF |
| J5N95_RS07135 (1476322) | 1476322..1476825 | - | 504 | WP_000825452.1 | Protein FimG | VF |
| J5N95_RS07140 (1476838) | 1476838..1477368 | - | 531 | WP_000876763.1 | Protein FimF | VF |
| J5N95_RS07145 (1477382) | 1477382..1478608 | - | 1227 | Protein_1407 | Outer membrane usher protein FimD | VF |
| J5N95_RS07150 (1478863) | 1478863..1479071 | - | 209 | Protein_1408 | AraC family transcriptional regulator | - |
| J5N95_RS07155 (1479383) | 1479383..1480705 | - | 1323 | WP_001125439.1 | type II toxin-antitoxin system serine/threonine protein kinase toxin HipA | Toxin Detail |
| J5N95_RS07160 (1480705) | 1480705..1480971 | - | 267 | WP_001301023.1 | type II toxin-antitoxin system antitoxin HipB | Antitoxin Detail |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli K-12 strain ER3413 | Genomic island | TA20025 | CP009789 | 1561271..1572871 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20066 | HG738867 | 1469371..1480971 | 0 | |
| Escherichia coli str. K-12 substr. MG1655 | Genomic island | TA1040 | NC_000913 | 1580842..1592442 | 0 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21437 | NC_007779 | 1582556..1594156 | 0 | |
| Escherichia coli HS | Genomic island | TA22421 | NC_009800 | 1597665..1609265 | 0.003 | |
| Escherichia coli str. K-12 substr. DH10B | Genomic island | TA22685 | NC_010473 | 1669461..1680091 | 0.002 | |
| Escherichia coli BW2952 | Genomic island | TA23853 | NC_012759 | 1470925..1482525 | 0 | |
| Escherichia coli DH1 | Genomic island | TA27403 | NC_017638 | 1563024..1574624 | 0 | |
| Escherichia coli str. K-12 substr. MDS42 | Genomic island | TA29002 | NC_020518 | 1287669..1299269 | 0 | |
| Escherichia coli BW25113 | Genomic island | TA48682 | NZ_CP009273 | 1575099..1586699 | 0 | |
| Escherichia coli str. K-12 substr. W3110 strain K-12 substr. ZK126 | Genomic island | TA68424 | NZ_CP017979 | 1484612..1496212 | 0 | |
| Escherichia coli strain DH5alpha | Genomic island | TA90478 | NZ_CP025520 | 438284..449884 | 0 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285016 | NZ_HG738867 | 1469371..1480971 | 0 |