MGE detailed information
MGE type: Prophage MGE length: 42230 bp
Accession: NZ_CP071994 Location: 1912582..1954811 Organism: Staphylococcus epidermidis strain AZ22 Replicon: chromosome
Accession: NZ_CP071994 Location: 1912582..1954811 Organism: Staphylococcus epidermidis strain AZ22 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J4Z28_RS08930 (J4Z28_001786) | 1907844..1908671 | - | 828 | WP_029376429.1 | sulfite exporter TauE/SafE family protein | - |
| J4Z28_RS08935 (J4Z28_001787) | 1908684..1909532 | - | 849 | WP_001831962.1 | DUF72 domain-containing protein | - |
| J4Z28_RS08940 (J4Z28_001788) | 1909899..1910924 | - | 1026 | WP_002470470.1 | CNNM domain-containing protein | - |
| J4Z28_RS08945 (J4Z28_001789) | 1911405..1911782 | - | 378 | WP_002499029.1 | hypothetical protein | - |
| J4Z28_RS08950 (J4Z28_001790) | 1911773..1911919 | - | 147 | WP_001831994.1 | hypothetical protein | - |
| J4Z28_RS08955 | 1912582..1912761 | - | 180 | WP_002468147.1 | hypothetical protein | - |
| J4Z28_RS08960 | 1913761..1914573 | - | 813 | WP_233944913.1 | SH3 domain-containing protein | - |
| J4Z28_RS08965 | 1914823..1915224 | - | 402 | WP_233944797.1 | CHAP domain-containing protein | - |
| J4Z28_RS08970 (J4Z28_001792) | 1915199..1915609 | - | 411 | WP_145397314.1 | phage holin | - |
| J4Z28_RS08975 (J4Z28_001793) | 1915672..1916070 | - | 399 | WP_145397316.1 | YxeA family protein | - |
| J4Z28_RS08980 (J4Z28_001794) | 1916228..1916635 | - | 408 | WP_145397318.1 | hypothetical protein | - |
| J4Z28_RS08985 (J4Z28_001795) | 1916622..1917047 | - | 426 | WP_002497615.1 | hypothetical protein | - |
| J4Z28_RS08990 (J4Z28_001796) | 1917044..1917667 | - | 624 | WP_063280535.1 | poly-gamma-glutamate hydrolase family protein | - |
| J4Z28_RS08995 (J4Z28_001797) | 1917672..1918886 | - | 1215 | WP_145397321.1 | BppU family phage baseplate upper protein | - |
| J4Z28_RS09000 (J4Z28_001798) | 1918886..1920748 | - | 1863 | WP_145397323.1 | M14 family metallopeptidase | - |
| J4Z28_RS09005 (J4Z28_001799) | 1920764..1920937 | - | 174 | WP_002453517.1 | hypothetical protein | - |
| J4Z28_RS09010 (J4Z28_001800) | 1920930..1922489 | - | 1560 | WP_203085229.1 | prophage endopeptidase tail family protein | - |
| J4Z28_RS09015 (J4Z28_001801) | 1922499..1923332 | - | 834 | WP_145397328.1 | phage tail family protein | - |
| J4Z28_RS09020 (J4Z28_001802) | 1923334..1927812 | - | 4479 | WP_233944799.1 | tape measure protein | - |
| J4Z28_RS09025 (J4Z28_001803) | 1927841..1927993 | - | 153 | WP_186298300.1 | hypothetical protein | - |
| J4Z28_RS09030 (J4Z28_001804) | 1928026..1928388 | - | 363 | WP_145397332.1 | hypothetical protein | - |
| J4Z28_RS09035 (J4Z28_001805) | 1928452..1928637 | - | 186 | WP_002484762.1 | hypothetical protein | - |
| J4Z28_RS09040 (J4Z28_001806) | 1928656..1929288 | - | 633 | WP_145397334.1 | phage tail protein | - |
| J4Z28_RS09045 (J4Z28_001807) | 1929301..1929705 | - | 405 | WP_002468129.1 | hypothetical protein | - |
| J4Z28_RS09050 (J4Z28_001808) | 1929710..1930114 | - | 405 | WP_002468130.1 | hypothetical protein | - |
| J4Z28_RS09055 (J4Z28_001809) | 1930111..1930440 | - | 330 | WP_002468167.1 | hypothetical protein | - |
| J4Z28_RS09060 (J4Z28_001810) | 1930430..1930771 | - | 342 | WP_145397336.1 | head-tail connector protein | - |
| J4Z28_RS09065 (J4Z28_001811) | 1930790..1932142 | - | 1353 | WP_145397338.1 | phage major capsid protein | - |
| J4Z28_RS09070 (J4Z28_001812) | 1932182..1932739 | - | 558 | WP_145397340.1 | HK97 family phage prohead protease | - |
| J4Z28_RS09075 (J4Z28_001813) | 1932729..1933961 | - | 1233 | WP_145397342.1 | phage portal protein | - |
| J4Z28_RS09080 (J4Z28_001814) | 1933964..1934158 | - | 195 | WP_002500102.1 | hypothetical protein | - |
| J4Z28_RS09085 (J4Z28_001815) | 1934170..1935921 | - | 1752 | WP_233944801.1 | terminase large subunit | - |
| J4Z28_RS09090 (J4Z28_001816) | 1935914..1936384 | - | 471 | WP_002468174.1 | phage terminase small subunit P27 family | - |
| J4Z28_RS09095 (J4Z28_001817) | 1936527..1936877 | - | 351 | WP_002498305.1 | HNH endonuclease | - |
| J4Z28_RS09100 (J4Z28_001818) | 1937468..1937914 | - | 447 | WP_002468152.1 | transcriptional regulator | - |
| J4Z28_RS09105 (J4Z28_001819) | 1938123..1938263 | - | 141 | WP_002468120.1 | hypothetical protein | - |
| J4Z28_RS09110 (J4Z28_001820) | 1938368..1938670 | + | 303 | WP_002498306.1 | hypothetical protein | - |
| J4Z28_RS09115 (J4Z28_001821) | 1938790..1939212 | - | 423 | WP_002468111.1 | dUTP diphosphatase | - |
| J4Z28_RS09120 (J4Z28_001822) | 1939269..1939586 | + | 318 | WP_224479694.1 | hypothetical protein | - |
| J4Z28_RS09125 (J4Z28_001823) | 1939604..1939804 | - | 201 | WP_002468135.1 | hypothetical protein | - |
| J4Z28_RS09130 | 1939794..1939964 | - | 171 | WP_233944914.1 | DUF3310 domain-containing protein | - |
| J4Z28_RS09135 | 1939992..1940246 | - | 255 | Protein_1768 | hypothetical protein | - |
| J4Z28_RS09140 (J4Z28_001825) | 1940243..1940602 | - | 360 | WP_002468115.1 | SA1788 family PVL leukocidin-associated protein | - |
| J4Z28_RS09145 (J4Z28_001826) | 1940603..1940800 | - | 198 | WP_002468127.1 | hypothetical protein | - |
| J4Z28_RS09150 (J4Z28_001827) | 1940801..1941208 | - | 408 | WP_002468165.1 | RusA family crossover junction endodeoxyribonuclease | - |
| J4Z28_RS09155 (J4Z28_001828) | 1941217..1941429 | - | 213 | WP_233944804.1 | hypothetical protein | - |
| J4Z28_RS09160 (J4Z28_001829) | 1941462..1941623 | - | 162 | WP_002468163.1 | hypothetical protein | - |
| J4Z28_RS09165 (J4Z28_001830) | 1941617..1942378 | - | 762 | WP_224479695.1 | IS21 family transposase ISRme9 | Transposase |
| J4Z28_RS09170 (J4Z28_001831) | 1942400..1943173 | - | 774 | WP_002498312.1 | conserved phage C-terminal domain-containing protein | - |
| J4Z28_RS09175 (J4Z28_001832) | 1943217..1943699 | + | 483 | WP_145397346.1 | hypothetical protein | - |
| J4Z28_RS09180 (J4Z28_001833) | 1943715..1944386 | - | 672 | WP_002498314.1 | putative HNHc nuclease | - |
| J4Z28_RS09185 (J4Z28_001834) | 1944398..1944952 | - | 555 | WP_049374172.1 | single-stranded DNA-binding protein | - |
| J4Z28_RS09190 (J4Z28_001835) | 1944981..1945757 | - | 777 | WP_002468156.1 | ATP-binding protein | - |
| J4Z28_RS09195 (J4Z28_001836) | 1945758..1946243 | - | 486 | WP_002498316.1 | siphovirus Gp157 family protein | - |
| J4Z28_RS09200 (J4Z28_001837) | 1946227..1946490 | - | 264 | WP_002468154.1 | hypothetical protein | - |
| J4Z28_RS09205 (J4Z28_001838) | 1946556..1946738 | - | 183 | WP_002498317.1 | hypothetical protein | - |
| J4Z28_RS09210 (J4Z28_001839) | 1946735..1946950 | - | 216 | WP_002468180.1 | hypothetical protein | - |
| J4Z28_RS09215 (J4Z28_001840) | 1947058..1947261 | + | 204 | WP_002468183.1 | hypothetical protein | - |
| J4Z28_RS09220 (J4Z28_001841) | 1947369..1947857 | - | 489 | WP_002498318.1 | ORF6C domain-containing protein | - |
| J4Z28_RS09225 (J4Z28_001842) | 1947916..1948296 | + | 381 | WP_002498319.1 | DUF2513 domain-containing protein | - |
| J4Z28_RS09230 (J4Z28_001843) | 1948288..1948464 | - | 177 | WP_002498320.1 | hypothetical protein | - |
| J4Z28_RS09235 (J4Z28_001844) | 1948475..1949392 | - | 918 | WP_080352717.1 | hypothetical protein | - |
| J4Z28_RS09240 (J4Z28_001845) | 1949407..1949643 | - | 237 | WP_002498322.1 | helix-turn-helix transcriptional regulator | - |
| J4Z28_RS09245 (J4Z28_001846) | 1949796..1950110 | + | 315 | WP_002498323.1 | helix-turn-helix transcriptional regulator | Antitoxin Detail |
| J4Z28_RS09250 (J4Z28_001847) | 1950123..1950584 | + | 462 | WP_233944806.1 | ImmA/IrrE family metallo-endopeptidase | Toxin Detail |
| J4Z28_RS09255 (J4Z28_001848) | 1950753..1950920 | + | 168 | WP_002498324.1 | hypothetical protein | - |
| J4Z28_RS09260 (J4Z28_001849) | 1950942..1952081 | + | 1140 | WP_002498325.1 | CapA family protein | - |
| J4Z28_RS09265 (J4Z28_001850) | 1952297..1953346 | + | 1050 | WP_002498326.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| J4Z28_RS09270 (J4Z28_001851) | 1953414..1954811 | - | 1398 | WP_002498327.1 | Fe-S cluster assembly protein SufB | - |
| J4Z28_RS09275 (J4Z28_001852) | 1955017..1955481 | - | 465 | WP_001831954.1 | SUF system NifU family Fe-S cluster assembly protein | - |
| J4Z28_RS09280 (J4Z28_001853) | 1955471..1956712 | - | 1242 | WP_002468879.1 | cysteine desulfurase | - |
| J4Z28_RS09285 (J4Z28_001854) | 1956780..1958087 | - | 1308 | WP_002470498.1 | Fe-S cluster assembly protein SufD | - |
| J4Z28_RS09290 (J4Z28_001855) | 1958182..1958943 | - | 762 | WP_001831944.1 | Fe-S cluster assembly ATPase SufC | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|