MGE detailed information
MGE type: IScluster/Tn MGE length: 9530 bp
Accession: NZ_CP071955 Location: 1529298..1538827 Organism: Xanthomonas fragariae strain YL19 Replicon: chromosome
Accession: NZ_CP071955 Location: 1529298..1538827 Organism: Xanthomonas fragariae strain YL19 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J5I97_RS07120 | 1524373..1525830 | + | 1458 | WP_208591598.1 | IMP dehydrogenase | - |
| J5I97_RS07125 | 1525956..1527521 | + | 1566 | WP_208590565.1 | glutamine-hydrolyzing GMP synthase | - |
| J5I97_RS07130 | 1527828..1529029 | + | 1202 | Protein_1333 | tyrosine-type recombinase/integrase | - |
| J5I97_RS07135 | 1529298..1530511 | + | 1214 | WP_208590567.1 | IS3 family transposase ISAzsp1 | Transposase |
| J5I97_RS07140 | 1530570..1531681 | - | 1112 | Protein_1335 | IS3 family transposase IS1404 | Transposase |
| J5I97_RS07150 | 1532935..1533468 | + | 534 | Protein_1337 | IS701 family transposase ISAzvi8 | Transposase |
| J5I97_RS07155 | 1533552..1534046 | - | 495 | WP_208590579.1 | hypothetical protein | - |
| J5I97_RS07160 | 1534616..1534897 | + | 282 | WP_002805735.1 | TraK family protein | - |
| J5I97_RS07165 | 1535309..1535563 | + | 255 | WP_208590581.1 | Arc family DNA-binding protein | Antitoxin Detail |
| J5I97_RS07170 | 1535560..1535979 | + | 420 | WP_208590583.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| J5I97_RS19865 | 1536312..1536419 | + | 108 | WP_238135662.1 | helix-turn-helix domain-containing protein | - |
| J5I97_RS19870 | 1536658..1536753 | + | 96 | Protein_1343 | IS30 family transposase | - |
| J5I97_RS07180 | 1536903..1537133 | + | 231 | Protein_1344 | transposase | - |
| J5I97_RS07185 | 1537198..1538169 | + | 972 | WP_208590244.1 | IS5 family transposase IS1646 | Transposase |
| J5I97_RS07190 | 1538298..1538878 | + | 581 | Protein_1346 | IS5/IS1182 family transposase | - |
| J5I97_RS07195 | 1538971..1539345 | - | 375 | WP_208590590.1 | Mth938-like domain-containing protein | - |
| J5I97_RS07200 | 1539362..1539667 | - | 306 | WP_208590591.1 | ribosome assembly RNA-binding protein YhbY | - |
| J5I97_RS07205 | 1539734..1540366 | + | 633 | WP_208590599.1 | 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE | - |
| J5I97_RS07210 | 1540428..1542368 | + | 1941 | WP_208590606.1 | ATP-dependent zinc metalloprotease FtsH | - |
| J5I97_RS07215 | 1542790..1543692 | + | 903 | WP_208590608.1 | dihydropteroate synthase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|